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1.
Nat Commun ; 15(1): 3704, 2024 May 02.
Artigo em Inglês | MEDLINE | ID: mdl-38697961

RESUMO

Motion of a passive deformable object in an active environment serves as a representative of both in-vivo systems such as intracellular particle motion in Acanthamoeba castellanii, or in-vitro systems such as suspension of beads inside dense swarms of Escherichia coli. Theoretical modeling of such systems is challenging due to the requirement of well resolved hydrodynamics which can explore the spatiotemporal correlations around the suspended passive object in the active fluid. We address this critical lack of understanding using coupled hydrodynamic equations for nematic liquid crystals with finite active stress to model the active bath, and a suspended nematic droplet with zero activity. The droplet undergoes deformation fluctuations and its movement shows periods of "runs" and "stays". At relatively low interfacial tension, the droplet begins to break and mix with the outer active bath. We establish that the motion of the droplet is influenced by the interplay of spatial correlations of the flow and the size of the droplet. The mean square displacement shows a transition from ballistic to normal diffusion which depends on the droplet size. We discuss this transition in relation to spatiotemporal scales associated with velocity correlations of the active bath and the droplet.

2.
Soft Matter ; 19(45): 8717-8728, 2023 Nov 22.
Artigo em Inglês | MEDLINE | ID: mdl-37886799

RESUMO

Homogeneous suspensions of red blood cells (RBCs or erythrocytes) in blood plasma are unstable in the absence of driving forces and form elongated stacks, called rouleaux. These erythrocyte aggregates are often branched porous networks - a feature that existing red blood cell aggregation models and simulations fail to predict exactly. Here we establish that alignment-dependent attractive forces in a system of dimers can precisely generate branched structures similar to RBC aggregates observed under a microscope. Our simulations consistently predict that the growth rate of typical mean rouleau size remains sub-linear - a hallmark from past studies - which we also confirm by deriving a reaction kernel taking into account appropriate collision cross-section, approach velocities, and an area-dependent sticking probability. The system exhibits unique features such as the existence of percolated and/or single giant cluster states, multiple coexisting mass-size scalings, and transition to a branched phase upon fine-tuning of model parameters. Upon decreasing the depletion thickness we find that the percolation threshold increases but the morphology of the structures opens up towards an increased degree of branching. Remarkably the system self-organizes to produce a universal power-law size distribution scaling irrespective of the model parameters.


Assuntos
Agregação Eritrocítica , Eritrócitos , Polímeros
3.
Soft Matter ; 18(3): 684, 2022 Jan 19.
Artigo em Inglês | MEDLINE | ID: mdl-34935842

RESUMO

Correction for 'Guided run-and-tumble active particles: wall accumulation and preferential deposition' by Chamkor Singh, Soft Matter, 2021, 17, 8858-8866, DOI: 10.1039/D1SM00775K.

4.
Soft Matter ; 17(39): 8858-8866, 2021 Oct 13.
Artigo em Inglês | MEDLINE | ID: mdl-34541594

RESUMO

Bacterial biofilms cost an enormous amount of resources in the health, medical, and industrial sectors. To understand early biofilm formation, beginning from planktonic states of active suspensions (such as Escherichia coli) to micro-colonization, it is vital to study the mechanics of cell accumulation near surfaces and subsequent deposition. Variability in bacterial motion strategies and the presence of taxis fields make the problem even more multifaceted. In this study, analytical expressions for the density and angular distributions, mean orientation, and deposition rates in such bacterial suspensions are derived, with and without the effects of external guiding or taxis fields. The derived results are closely verified by simulations of confined active particles using run-and-tumble statistics from multiple past experiments and utilizing a preferential sticking probability model for deposition. The behavioral changes in cell running strategies are modeled by varying the run-time distribution from an exponential to a heavy-tailed one. It is found that the deposition rates can be altered significantly by a guiding torque but are less affected by a change in the cell running behavior. However, both the mechanisms alter the pair correlation function of the deposited structures. The factor behind the changes in the architecture of deposited biomass under a torque generating guiding field turns out to be an asymmetrical rotational drift of planktonic cells, which can be an important physical mechanism behind the organization in confined active particle suspensions.


Assuntos
Escherichia coli , Corrida , Movimento (Física) , Suspensões , Torque
5.
Sci Rep ; 9(1): 9049, 2019 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-31227758

RESUMO

The empirical observation of aggregation of dielectric particles under the influence of electrostatic forces lies at the origin of the theory of electricity. The growth of clusters formed of small grains underpins a range of phenomena from the early stages of planetesimal formation to aerosols. However, the collective effects of Coulomb forces on the nonequilibrium dynamics and aggregation process in a granular gas - a model representative of the above physical processes - have so far evaded theoretical scrutiny. Here, we establish a hydrodynamic description of aggregating granular gases that exchange charges upon collisions and interact via the long-ranged Coulomb forces. We analytically derive the governing equations for the evolution of granular temperature, charge variance, and number density for homogeneous and quasi-monodisperse aggregation. We find that, once the aggregates are formed, the granular temperature of the cluster population, the charge variance of the cluster population and the number density of the cluster population evolve in such a way that their non-dimensional combination obeys a physical constraint of nearly constant dimensionless ratio of characteristic electrostatic to kinetic energy. This constraint on the collective evolution of charged clusters is confirmed both by  our theory and our detailed molecular dynamics simulations. The inhomogeneous aggregation of monomers and clusters in their mutual electrostatic field proceeds in a fractal manner. Our theoretical framework is extendable to more precise charge exchange mechanisms, a current focus of extensive experimentation. Furthermore, it illustrates the collective role of long-ranged interactions in dissipative gases and can lead to novel designing principles in particulate systems.

6.
Phys Rev E ; 97(2-1): 022904, 2018 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-29548210

RESUMO

Neutral grains made of the same dielectric material can attain considerable charges due to collisions and generate long-range interactions. We perform molecular dynamic simulations in three dimensions for a dilute, freely cooling granular gas of viscoelastic particles that exchange charges during collisions. As compared to the case of clustering of viscoelastic particles solely due to dissipation, we find that the electrostatic interactions due to collisional charging alter the characteristic size, morphology, and growth rate of the clusters. The average cluster size grows with time as a power law, whose exponent is relatively larger in the charged gas than the neutral case. The growth of the average cluster size is found to be independent of the ratio of characteristic Coulomb to kinetic energy, or equivalently, of the typical Bjerrum length. However, this ratio alters the crossover time of the growth. Both simulations and mean-field calculations based on Smoluchowski's equation suggest that a suppression of particle diffusion due to the electrostatic interactions helps in the aggregation process.

7.
Phys Rev E ; 94(1-1): 012803, 2016 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-27575198

RESUMO

This work reports an experimental and a numerical study of the interfacial instability in a mercury-ferrofluid system caused by a spatially nonuniform magnetic field against the action of gravity and interfacial tension. The interface evolution is observed to be continuous till its movement is hindered by a physical boundary. In contrast to the behavior of the ferrofluid interface under uniform field, we noted the instability growth to be monotonic under a field gradient. A steepness in the growth curve is noticed during the later stages of the instability, indicating a high magnitude of the growth velocities. Some unique phenomena, such as similarity of the growth at the initial stage, a slope transition in the growth curve at a later stage, and wrapping and pinning of the interface are observed, both in experiments and simulations.

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