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1.
ACS Appl Energy Mater ; 6(9): 4862-4880, 2023 May 08.
Artigo em Inglês | MEDLINE | ID: mdl-37181248

RESUMO

Luminescent solar concentrators (LSCs) are a class of optical devices able to harvest, downshift, and concentrate sunlight, thanks to the presence of emitting materials embedded in a polymer matrix. Use of LSCs in combination with silicon-based photovoltaic (PV) devices has been proposed as a viable strategy to enhance their ability to harvest diffuse light and facilitate their integration in the built environment. LSC performances can be improved by employing organic fluorophores with strong light absorption in the center of the solar spectrum and intense, red-shifted emission. In this work, we present the design, synthesis, characterization, and application in LSCs of a series of orange/red organic emitters featuring a benzo[1,2-b:4,5-b']dithiophene 1,1,5,5-tetraoxide central core as an acceptor (A) unit. The latter was connected to different donor (D) and acceptor (A') moieties by means of Pd-catalyzed direct arylation reactions, yielding compounds with either symmetric (D-A-D) or non-symmetric (D-A-A') structures. We found that upon light absorption, the compounds attained excited states with a strong intramolecular charge-transfer character, whose evolution was greatly influenced by the nature of the substituents. In general, symmetric structures showed better photophysical properties for the application in LSCs than their non-symmetric counterparts, and using a donor group of moderate strength such as triphenylamine was found preferable. The best LSC built with these compounds presented photonic (external quantum efficiency of 8.4 ± 0.1%) and PV (device efficiency of 0.94 ± 0.06%) performances close to the state-of-the-art, coupled with a sufficient stability in accelerated aging tests.

2.
Molecules ; 28(5)2023 Mar 02.
Artigo em Inglês | MEDLINE | ID: mdl-36903578

RESUMO

The appearance of a new coronavirus, SARS-CoV-2, in 2019 kicked off an international public health emergency. Although rapid progress in vaccination has reduced the number of deaths, the development of alternative treatments to overcome the disease is still necessary. It is known that the infection begins with the interaction of the spike glycoprotein (at the virus surface) and the angiotensin-converting enzyme 2 cell receptor (ACE2). Therefore, a straightforward solution for promoting virus inhibition seems to be the search for molecules capable of abolishing such attachment. In this work, we tested 18 triterpene derivatives as potential inhibitors of SARS-CoV-2 against the receptor-binding domain (RBD) of the spike protein by means of molecular docking and molecular dynamics simulations, modeling the RBD S1 subunit from the X-ray structure of the RBD-ACE2 complex (PDB ID: 6M0J). Molecular docking revealed that at least three triterpene derivatives of each type (i.e., oleanolic, moronic and ursolic) present similar interaction energies as the reference molecule, i.e., glycyrrhizic acid. Molecular dynamics suggest that two compounds from oleanolic and ursolic acid, OA5 and UA2, can induce conformational changes capable of disrupting the RBD-ACE2 interaction. Finally, physicochemical and pharmacokinetic properties simulations revealed favorable biological activity as antivirals.


Assuntos
COVID-19 , SARS-CoV-2 , Humanos , Enzima de Conversão de Angiotensina 2 , Simulação de Acoplamento Molecular , Glicoproteína da Espícula de Coronavírus , Simulação de Dinâmica Molecular , Ligação Proteica
3.
Phys Chem Chem Phys ; 24(24): 14993-15002, 2022 Jun 22.
Artigo em Inglês | MEDLINE | ID: mdl-35687061

RESUMO

Recently, great research efforts have been devoted to perovskite solar cells (PSCs) leading to sunlight-to-power conversion efficiencies above 25%. However, several barriers still hinder the full deployment of these devices. Critical issues are related to PCE stability and device lifetimes, which could be improved by targeted engineering of the hole transport material (HTM). Indeed, the HTM is not only responsible for transporting holes and preventing direct contact between the photo-active perovskite and the charge collector layer, but it plays important structural and protective roles too. As alternatives to the widely used yet expensive and unstable Spiro-OMeTAD, organic HTMs based on triphenylamine (TPA) and phenothiazine (PTZ) moieties have been proposed. However, their performances in PSC devices, and in particular their interfacial properties with the most popular methylammonium lead iodide perovskite (MAPI) still need investigations to be fully determined. In this framework, here we report a first-principles study on the structural and the electronic properties of a recently designed TPA and PTZ-based HTM (HTM1) and its interface with the MAPI (001) surface, considering both the PbI2- and the MAI-terminations. We also addressed already known HTM molecular systems to allow for a direct comparison with the recently proposed HTM1: we characterized the molecular parameters and the MAPI/HTM interfacial properties for Spiro-OMeTAD, PTZ1, and PTZ2. Our results suggest that good adhesion properties do not ensure effective and efficient MAPI-HTM hole injection. Despite the theoretical good alignment between HTM1 HOMO and MAPI valence band edge, our results for the mutually polarized interface point out the lack of a sufficient driving force for hole transport. While the hole mobility of HTM1 outperforms those of the other HTM molecules, for this HTM molecule, our findings suggest the application of lead halide perovskite compositions other than MAPI, with substituents that lower its valence band maximum potential value.

4.
Open Res Eur ; 1: 44, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-37645134

RESUMO

This work aims to review the most significant studies dealing with the environmental issues of the use of lead in perovskite solar cells (PSCs). A careful discussion and rationalization of the environmental and human health toxicity impacts, evaluated by life cycle assessment and risk assessment studies, is presented. The results of this analysis are prospectively related to the possible future massive production of PSC technology.

5.
Sci Total Environ ; 744: 140569, 2020 Nov 20.
Artigo em Inglês | MEDLINE | ID: mdl-32687999

RESUMO

This paper compares the economic and environmental optimal design of Solar Home Systems (SHSs) and explores the role of economic incentives (such as tariffs and technology costs) in approximating the two optima. To achieve that, we present a methodology for the environmental and economic evaluation of grid-connected SHSs: user-scale electric systems involving a photovoltaic (PV) power system and a battery energy storage system. The proposed methodology is based on a mixed integer linear programming (MILP) optimization, life cycle assessment and life cycle costing. This methodological framework is applied to a case study involving a typical SHS installation in Italy. The results of the environmental optimal design brought to the evaluation of a 3.25 kW PV assisted by 8.66 kWh of nickel cobalt manganese batteries, whereas the costs of the SHS are minimized by a small PV system (less than 1 kW). Results underline that the environmental optimal configurations rely on battery technologies, which entails a significant cost compared to the grid connection. In contrast, the economic optimal design solutions is less impactful than the grid mix both from an environmental and economic points of view. Thanks to a reduction of batteries and PV costs, the environmental impact of the economic optimal design is expected to decrease in the future.

6.
Molecules ; 25(15)2020 Jul 25.
Artigo em Inglês | MEDLINE | ID: mdl-32722406

RESUMO

A new series of symmetrical organic dyes containing an indigo central core decorated with different electron donor groups have been prepared, starting from Tyrian Purple and using the Pd-catalyzed Stille-Migita coupling process. The effect of substituents on the spectroscopic properties of the dyes has been investigated theoretically and experimentally. In general, all dyes presented intense light absorption bands, both in the blue and red regions of the visible spectrum, conferring them a bright green color in solution. Using the same approach, an asymmetrically substituted D-A-π-A green dye, bearing a triarylamine electron donor and the cyanoacrylate acceptor/anchoring group, has been synthesized for the first time and fully characterized, confirming that spectroscopic and electrochemical properties are consistent with a possible application in dye-sensitized solar cells (DSSC).


Assuntos
Aminas/química , Corantes/química , Índigo Carmim/química , Energia Solar , Cor , Corantes/síntese química , Fontes de Energia Elétrica , Índigo Carmim/síntese química , Indóis/química , Modelos Moleculares , Análise Espectral
7.
Front Chem ; 8: 214, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32296679

RESUMO

New generation photovoltaic devices have attracted much attention in the last decades since they can be efficiently manufactured employing abundant raw materials and with less-energy intensive processes. In this context, the use of powerful environmental assessment is pivotal to support the fine-tuning of solar cells fabrication and hit the target of manufacturing effective sustainable technological devices. In this work, a mass-based green metrics and life cycle assessment combined approach is applied to analyze the environmental performances of an innovative synthetic protocol for the preparation of organic dye TTZ5, which has been successfully proposed as sensitizer for manufacturing dye sensitized solar cells. The new synthetic strategy, which is based on the C-H activation process, has been compared with the previously reported synthesis employing classic Suzuki-Miyaura cross-coupling chemistry. Results highlight the contribution of direct energy consumption and purification operations in organic syntheses at lab scale. Furthermore, they demonstrate the usefulness of the environmental multifaceted analytic tool and the power of life cycle assessment to overcome the intrinsic less comprehensive nature of green metrics for the evaluation of organic synthetic protocols.

8.
Data Brief ; 30: 105499, 2020 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-32322630

RESUMO

Datasets concerning the European electricity mix, built employing the Ecoinvent database v.3.3 processes, are reported in this paper. Foreseen future scenarios are modelled based on acknowledged projections for energy market in Europe in 2050. These electricity mix data inventories could be useful for any academic or stakeholder interested in performing long-term prospective assessment of innovative generation technologies in the future European energy market.

9.
Sci Total Environ ; 700: 134814, 2020 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-31693959

RESUMO

Renewable energy sources are fundamental to face the problem of climate changes. Unfortunately, some resources, such as wind and solar radiation, have fluctuations affecting the electrical grids stability. Energy storage systems can be used for a smart energy management to accumulate power from renewable sources. For such reason, these devices play a key role to achieve a sustainable electric system. On the other hand, they are affected by some environmental drawbacks mainly connected with the depletion of rare and expensive materials. Based on these considerations, in this study a nano-grid composed by a photovoltaic plant, a backup generator and an energy storage system is analysed by an environmental Life Cycle Assessment approach. A Solar Home System is designed, and its environmental profile is evaluated considering several Lithium-ion batteries. Among them, nickel-cobalt aluminium oxide cells resulted to be the most suitable solution for a Solar Home System (46.66 Pts/MWh). Moreover, a sensitivity analysis of the Solar Home System is performed and a hybrid energy storage plant integrating hydrogen and batteries is proposed to face the problem of seasonal solar radiation variability. Four scenarios having different gas pressure levels and lifespan of the devices are considered. Results show that currently the most sustainable configuration is represented by the Solar Home System, but in the future a hybrid nano-grid equipped with 700 bar hydrogen storage might be the best off-grid configuration for minimizing the impact on the environment (37.77 Pts/MWh). Extending the perspective of our analysis to future on-grid potential configurations, an efficient connection of the Solar Home System with a smart-grid is assessed as it looks more sustainable than other off-grid solutions (22.81 Pts/MWh).

10.
Data Brief ; 28: 104895, 2020 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-31872010

RESUMO

Datasets concerning some user-scale Smart Grids, named Nano-grids, are reported in this paper. First several Solar Home Systems composed of a photovoltaic plant, a backup generator and different types of lithium-ion batteries are provided. Then, the inventory analysis of hybrid Nano-grids integrating batteries and hydrogen storage is outlined according to different scenarios. These data inventory could be useful for any academic or stakeholder interested in reproducing this analysis and/or developing environmental sustainability assessment in the field of Smart Grids. For more insight, please see "Environmental analysis of a Nano-Grid: a Life Cycle Assessment" by Rossi F, Parisi M.L., Maranghi S., Basosi R., Sinicropi A. [1].

11.
ACS Omega ; 4(4): 7614-7627, 2019 Apr 30.
Artigo em Inglês | MEDLINE | ID: mdl-31459854

RESUMO

The design, synthesis, and characterization of a new class of blue-colored thiophene-substituted Pechmann dyes are reported. Due to a distinguishing blue coloration and the capability to absorb light in one of the most photon-dense regions of the solar spectrum, such compounds are of great interest for application as photoactive materials in organic optoelectronics, in particular, in dye-sensitized solar cells. To achieve fine tuning of the optical and electrochemical properties, the electron-poor thiophene-bis-lactone moiety has been decorated with donor (D) and acceptor groups (A), targeting fully conjugated D-A-π-A structures. The designed structures have been investigated by means of DFT and time-dependent DFT calculations, and the most promising dyes have been synthesized. These molecules represent the very first preparation of unsymmetrical Pechmann derivatives. Optical and electrochemical properties of the new dyes have been studied by cyclic voltammetry and UV-vis and fluorescence spectroscopy. In two cases, test cells were built proving that a photocurrent can indeed be generated when using electrolytes especially formulated for narrow-band-gap dyes, although with a very low efficiency.

12.
Inorg Chem ; 58(16): 10920-10927, 2019 Aug 19.
Artigo em Inglês | MEDLINE | ID: mdl-31369243

RESUMO

The effect of Cu2+ on α-synuclein (AS) aggregation is important because clinical studies of patients with Parkinson's disease have shown elevated levels of Cu2+ in the cerebrospinal fluid. So far, the molecular architectures of Cu2+-AS fibril complexes at atomic resolution are unknown. The current work identifies for the first time that His50 cannot bind Cu2+ ions in mature fibrils. Moreover, it shows hopping of Cu2+ ions between residues in AS fibrils and changes in the Cu2+ coordination mode in Cu2+ ions that bind in the termini of AS. The current study combines extensive experimental techniques, density functional theory calculations, and computational modeling tools to provide a complete description of the Cu2+ binding site in AS fibrils. Our findings illustrate for the first time the specific interactions between Cu2+ ions and AS fibrils, suggesting a new mechanistic perspective on the effect of Cu2+ ions on AS aggregation.

13.
Phys Chem Chem Phys ; 19(23): 15310-15323, 2017 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-28569917

RESUMO

Dye-sensitized solar cells (DSSCs) have attracted significant interest in the last few years as effective low-cost devices for solar energy conversion. We have analyzed the excited state dynamics of several organic dyes bearing both cyanoacrylic acid and siloxane anchoring groups. The spectroscopic properties of the dyes have been studied both in solution and when adsorbed on a TiO2 film using stationary and time-resolved techniques, probing the sub-picosecond to nanosecond time interval. The comparison between the spectra registered in solution and on the solid substrate evidences different pathways for energy and electron relaxation. The transient spectra of the TiO2-adsorbed dyes show the appearance of a long wavelength excited state absorption band, attributed to the cationic dye species, which is absent in the spectra measured in solution. Furthermore, the kinetic traces of the samples adsorbed on the TiO2 film show a long decay component not present in solution which constitutes indirect evidence of electron transfer between the dye and the semiconductor. The interpretation of the experimental results has been supported by theoretical DFT calculations of the excited state energies and by the analysis of molecular orbitals of the analyzed dye molecules.

14.
Angew Chem Int Ed Engl ; 56(23): 6502-6506, 2017 06 01.
Artigo em Inglês | MEDLINE | ID: mdl-28464409

RESUMO

The concerted redox action of a metal ion and an organic cofactor is a unique way to maximize the catalytic power of an enzyme. An example of such synergy is the fungal galactose 6-oxidase, which has inspired the creation of biomimetic copper oxidation catalysts. Galactose 6-oxidase and its bacterial homologue, GlxA, possess a metalloradical catalytic site that contains a free radical on a covalently linked Cys-Tyr and a copper atom. Such a catalytic site enables for the two-electron oxidation of alcohols to aldehydes. When the ability to form the Cys-Tyr in GlxA is disrupted, a radical can still be formed. Surprisingly, the radical species is not the Tyr residue but rather a copper second-coordination sphere Trp residue. This is demonstrated through the introduction of a new algorithm for Trp-radical EPR spectra simulation. Our findings suggest a new mechanism of free-radical transfer between aromatic residues and that the Cys-Tyr cross-link prevents radical migration away from the catalytic site.


Assuntos
Cobre/química , Cisteína/química , Galactose Oxidase/química , Galactose Oxidase/metabolismo , Triptofano/química , Tirosina/química , Algoritmos , Domínio Catalítico , Cristalografia por Raios X , Espectroscopia de Ressonância de Spin Eletrônica , Oxirredução
15.
J Chem Theory Comput ; 11(10): 4825-39, 2015 Oct 13.
Artigo em Inglês | MEDLINE | ID: mdl-26574271

RESUMO

The nature of the coupling of the photoexcited chromophore with the environment in a prototypical system like green fluorescent protein (GFP) is to date not understood, and its description still defies state-of-the-art multiscale approaches. To identify which theoretical framework of the chromophore-protein complex can realistically capture its essence, we employ here a variety of electronic-structure methods, namely, time-dependent density functional theory (TD-DFT), multireference perturbation theory (NEVPT2 and CASPT2), and quantum Monte Carlo (QMC) in combination with static point charges (QM/MM), DFT embedding (QM/DFT), and classical polarizable embedding through induced dipoles (QM/MMpol). Since structural modifications can significantly affect the photophysics of GFP, we also account for thermal fluctuations through extensive molecular dynamics simulations. We find that a treatment of the protein through static point charges leads to significantly blue-shifted excitation energies and that including thermal fluctuations does not cure the coarseness of the MM description. While TDDFT calculations on large cluster models indicate the need of a responsive protein, this response is not simply electrostatic: An improved description of the protein in the ground state or in response to the excitation of the chromophore via ground-state or state-specific DFT and MMpol embedding does not significantly modify the results obtained with static point charges. Through the use of QM/MMpol in a linear response formulation, a different picture in fact emerges in which the main environment response to the chromophore excitation is the one coupling the transition density and the corresponding induced dipoles. Such interaction leads to significant red-shifts and a satisfactory agreement with full QM cluster calculations at the same level of theory. Our findings demonstrate that, ultimately, faithfully capturing the effects of the environment in GFP requires a quantum treatment of large photoexcited regions but that a QM/classical model can be a useful approximation when extended beyond the electrostatic-only formulation.


Assuntos
Proteínas de Fluorescência Verde/química , Teoria Quântica , Absorção Fisico-Química , Elétrons , Modelos Moleculares , Método de Monte Carlo , Fatores de Tempo
16.
J Phys Chem B ; 119(43): 13583-92, 2015 Oct 29.
Artigo em Inglês | MEDLINE | ID: mdl-26120933

RESUMO

Peroxide-activated Auricularia auricula-judae dye-decolorizing peroxidase (DyP) forms a mixed Trp377 and Tyr337 radical, the former being responsible for oxidation of the typical DyP substrates (Linde et al. Biochem. J., 2015, 466, 253-262); however, a pure tryptophanyl radical EPR signal is detected at pH 7 (where the enzyme is inactive), in contrast with the mixed signal observed at pH for optimum activity, pH 3. On the contrary, the presence of a second tyrosine radical (at Tyr147) is deduced by a multifrequency EPR study of a variety of simple and double-directed variants (including substitution of the above and other tryptophan and tyrosine residues) at different freezing times after their activation by H2O2 (at pH 3). This points out that subsidiary long-range electron-transfer pathways enter into operation when the main pathway(s) is removed by directed mutagenesis, with catalytic efficiencies progressively decreasing. Finally, self-reduction of the Trp377 neutral radical is observed when reaction time (before freezing) is increased in the absence of reducing substrates (from 10 to 60 s). Interestingly, the tryptophanyl radical is stable in the Y147S/Y337S variant, indicating that these two tyrosine residues are involved in the self-reduction reaction.


Assuntos
Basidiomycota/metabolismo , Corantes/metabolismo , Peroxidases/metabolismo , Basidiomycota/química , Domínio Catalítico , Corantes/química , Espectroscopia de Ressonância de Spin Eletrônica , Transporte de Elétrons , Modelos Moleculares , Oxirredução , Peroxidases/química , Teoria Quântica
17.
Cell Mol Life Sci ; 72(5): 885-96, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25595303

RESUMO

Laccases are multicopper oxidases which oxidize a wide variety of aromatic compounds with the concomitant reduction of oxygen to water as by-product. Due to their high stability and biochemical versatility, laccases are key enzymes to be used as eco-friendly biocatalyst in biotechnological applications. The presence of copper paramagnetic species in the catalytic site paired with the substrate radical species produced in the catalytic cycle makes laccases particularly attractive to be studied by spectroscopic approaches. In this review, the potentiality of a combined multifrequency electron paramagnetic spectroscopy /computational approach to gain information on the nature of the catalytic site and radical species is presented. The knowledge at molecular level of the enzyme oxidative process can be of great help to model new enzymes with increased efficiency and robustness.


Assuntos
Lacase/metabolismo , Barbitúricos/química , Biocatálise , Domínio Catalítico , Cobre/química , Cobre/metabolismo , Espectroscopia de Ressonância de Spin Eletrônica , Lacase/química , Especificidade por Substrato
18.
Biochem J ; 466(2): 253-62, 2015 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-25495127

RESUMO

Dye-decolorizing peroxidase (DyP) of Auricularia auricula-judae has been expressed in Escherichia coli as a representative of a new DyP family, and subjected to mutagenic, spectroscopic, crystallographic and computational studies. The crystal structure of DyP shows a buried haem cofactor, and surface tryptophan and tyrosine residues potentially involved in long-range electron transfer from bulky dyes. Simulations using PELE (Protein Energy Landscape Exploration) software provided several binding-energy optima for the anthraquinone-type RB19 (Reactive Blue 19) near the above aromatic residues and the haem access-channel. Subsequent QM/MM (quantum mechanics/molecular mechanics) calculations showed a higher tendency of Trp-377 than other exposed haem-neighbouring residues to harbour a catalytic protein radical, and identified the electron-transfer pathway. The existence of such a radical in H2O2-activated DyP was shown by low-temperature EPR, being identified as a mixed tryptophanyl/tyrosyl radical in multifrequency experiments. The signal was dominated by the Trp-377 neutral radical contribution, which disappeared in the W377S variant, and included a tyrosyl contribution assigned to Tyr-337 after analysing the W377S spectra. Kinetics of substrate oxidation by DyP suggests the existence of high- and low-turnover sites. The high-turnover site for oxidation of RB19 (k(cat) > 200 s⁻¹) and other DyP substrates was assigned to Trp-377 since it was absent from the W377S variant. The low-turnover site/s (RB19 k(cat) ~20 s⁻¹) could correspond to the haem access-channel, since activity was decreased when the haem channel was occluded by the G169L mutation. If a tyrosine residue is also involved, it will be different from Tyr-337 since all activities are largely unaffected in the Y337S variant.


Assuntos
Basidiomycota/enzimologia , Corantes/química , Proteínas Fúngicas/química , Hemeproteínas/química , Modelos Moleculares , Peroxidases/química , Triptofano/química , Substituição de Aminoácidos , Sítios de Ligação , Biocatálise , Corantes/metabolismo , Radicais Livres/química , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Hemeproteínas/genética , Hemeproteínas/metabolismo , Simulação de Acoplamento Molecular , Simulação de Dinâmica Molecular , Mutagênese Sítio-Dirigida , Proteínas Mutantes/química , Proteínas Mutantes/metabolismo , Oxirredução , Peroxidases/genética , Peroxidases/metabolismo , Conformação Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Propriedades de Superfície , Tirosina/química
19.
Chem Commun (Camb) ; 50(90): 13952-5, 2014 Nov 21.
Artigo em Inglês | MEDLINE | ID: mdl-25264863

RESUMO

Three new thiazolo[5,4-d]thiazole-based organic dyes have been designed and synthesized for employment as DSSC sensitizers. Alternation of the electron poor thiazolothiazole unit with two propylenedioxythiophene (ProDOT) groups ensured very intense light absorption in the visible region (ε up to 9.41 × 10(4) M(-1) cm(-1) in THF solution). The dyes were particularly suitable for application in transparent and opaque thin-layer DSSCs (TiO2 thickness: 5.5-6.5 µm, efficiencies up to 7.71%), thus being good candidates for production of solar cells under simple fabrication conditions.

20.
J Phys Chem B ; 118(32): 9525-37, 2014 Aug 14.
Artigo em Inglês | MEDLINE | ID: mdl-25084495

RESUMO

Cytochrome c peroxidase (CcP) is a heme-containing enzyme that catalyzes the oxidation of the ferrocytochrome c to ferricytochrome c with concomitant reduction of H2O2 to H2O. Its catalytic cycle involves the formation of a double oxidized species (compound I) consisting of an oxoferryl center (Fe(IV)═O) and an amino acid radical (R(•)). Here we use a quantum-mechanics/molecular-mechanics (QM/MM) computational protocol based on density functional theory (DFT) and multiconfigurational perturbation theory (CASPT2) methods to reproduce specific features of compound I EPR and UV-vis spectra. The results show that the employed QM/MM models can correctly predict the magnetic, electronic and vibrational properties of the observed amino acid radicals of compound I. Furthermore, we have been able to confirm that the principal radical species of compound I is a tryptophan cationic radical located on residue 191 (Trp191(•+)) and that three tyrosine residues (Tyr203, Tyr236, and Tyr251), located along two possible ET pathways involving Trp191(•+), are possible candidates to host the secondary radical species.


Assuntos
Citocromo-c Peroxidase/química , Triptofano/química , Tirosina/química , Citocromo-c Peroxidase/metabolismo , Espectroscopia de Ressonância de Spin Eletrônica , Transporte de Elétrons , Radicais Livres/química , Radicais Livres/metabolismo , Modelos Moleculares , Teoria Quântica , Triptofano/metabolismo , Tirosina/metabolismo
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