Coexistence or conflict: Black bear habitat use along an urban-wildland gradient.

The urban-wildland interface is expanding and increasing the risk of human-wildlife conflict. Some wildlife species adapt to or avoid living near people, while others select for anthropogenic resources and are thus more prone to conflict. To promote human-wildlife coexistence, wildlife and land managers need to understand how conflict relates to habitat and resource use in the urban-wildland interface. We investigated black bear (Ursus americanus) habitat use across a gradient of human disturbance in a North American hotspot of human-black bear conflict. We used camera traps to monitor bear activity from July 2018 to July 2019, and compared bear habitat use to environmental and anthropogenic variables and spatiotemporal probabilities of conflict. Bears predominantly used areas of high vegetation productivity and increased their nocturnality near people. Still, bears used more high-conflict areas in summer and autumn, specifically rural lands with ripe crops. Our results suggest that bears are generally modifying their behaviours in the urban-wildland interface through spatial and temporal avoidance of humans, which may facilitate coexistence. However, conflict still occurs, especially in autumn when hyperphagia and peak crop availability attract bears to abundant rural food resources. To improve conflict mitigation practices, we recommend targeting seasonal rural attractants with pre-emptive fruit picking, bear-proof compost containment, and other forms of behavioural deterrence. By combining camera-trap monitoring of a large carnivore along an anthropogenic gradient with conflict mapping, we provide a framework for evidence-based improvements in human-wildlife coexistence.

Ecology and Infection Dynamics of Multi-Host Amdoparvoviral and Protoparvoviral Carnivore Pathogens.

Amdoparvovirus and Protoparvovirus are monophyletic viral genera that infect carnivores. We performed surveillance for and sequence analyses of parvoviruses in mustelids in insular British Columbia to investigate parvoviral maintenance and cross-species transmission among wildlife. Overall, 19.1% (49/256) of the tested animals were parvovirus-positive. Aleutian mink disease virus (AMDV) was more prevalent in mink (41.6%, 32/77) than martens (3.1%, 4/130), feline panleukopenia virus (FPV) was more prevalent in otters (27.3%, 6/22) than mink (5.2%, 4/77) or martens (2.3%, 3/130), and canine parvovirus 2 (CPV-2) was found in one mink, one otter, and zero ermines (N = 27). Viruses were endemic and bottleneck events, founder effects, and genetic drift generated regional lineages. We identified two local closely related AMDV lineages, one CPV-2 lineage, and five FPV lineages. Highly similar viruses were identified in different hosts, demonstrating cross-species transmission. The likelihood for cross-species transmission differed among viruses and some species likely represented dead-end spillover hosts. We suggest that there are principal maintenance hosts (otters for FPV, raccoons for CPV-2/FPV, mink for AMDV) that enable viral persistence and serve as sources for other susceptible species. In this multi-host system, viral and host factors affect viral persistence and distribution, shaping parvoviral ecology and evolution, with implications for insular carnivore conservation.

Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios.

Even though human and chimpanzee gene sequences are nearly 99% identical, sequence comparisons can nevertheless be highly informative in identifying biologically important changes that have occurred since our ancestral lineages diverged. We analyzed alignments of 7645 chimpanzee gene sequences to their human and mouse orthologs. These three-species sequence alignments allowed us to identify genes undergoing natural selection along the human and chimp lineage by fitting models that include parameters specifying rates of synonymous and nonsynonymous nucleotide substitution. This evolutionary approach revealed an informative set of genes with significantly different patterns of substitution on the human lineage compared with the chimpanzee and mouse lineages. Partitions of genes into inferred biological classes identified accelerated evolution in several functional classes, including olfaction and nuclear transport. In addition to suggesting adaptive physiological differences between chimps and humans, human-accelerated genes are significantly more likely to underlie major known Mendelian disorders.