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1.
Mol Microbiol ; 91(3): 472-93, 2014 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-24286256

RESUMO

Nitrogen metabolite repression (NMR) in filamentous fungi is controlled by the GATA transcription factors AreA and AreB. While AreA mainly acts as a positive regulator of NMR-sensitive genes, the role of AreB is not well understood. We report the characterization of AreB and its interplay with AreA in the gibberellin-producing fungus Fusarium fujikuroi. The areB locus produces three different transcripts that each code for functional proteins fully complementing the areB deletion mutant that influence growth and secondary metabolism. However, under nitrogen repression, the AreB isoforms differ in subcellular localization indicating distinct functions under these conditions. In addition, AreA and two isoforms of AreB colocalize in the nucleus under low nitrogen, but their nuclear localization disappears under conditions of high nitrogen. Using a bimolecular fluorescence complementation (BiFC) approach we showed for the first time that one of the AreB isoforms interacts with AreA when starved of nitrogen. Cross-species complementation revealed that some AreB functions are retained between F. fujikuroi and Aspergillus nidulans while others have diverged. By comparison to other fungi where AreB was postulated to function as a negative counterpart of AreA, AreB can act as both repressor and activator of transcription in F. fujikuroi.


Assuntos
Proteínas Fúngicas/metabolismo , Fusarium/genética , Fusarium/metabolismo , Fatores de Transcrição GATA/metabolismo , Regulação Fúngica da Expressão Gênica , Nitrogênio/metabolismo , Mapeamento de Interação de Proteínas , Núcleo Celular/química , Citoplasma/química , Fusarium/crescimento & desenvolvimento , Deleção de Genes , Perfilação da Expressão Gênica , Teste de Complementação Genética
2.
Appl Environ Microbiol ; 79(24): 7719-34, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24096420

RESUMO

Histone modifications are crucial for the regulation of secondary metabolism in various filamentous fungi. Here we studied the involvement of histone deacetylases (HDACs) in secondary metabolism in the phytopathogenic fungus Fusarium fujikuroi, a known producer of several secondary metabolites, including phytohormones, pigments, and mycotoxins. Deletion of three Zn(2+)-dependent HDAC-encoding genes, ffhda1, ffhda2, and ffhda4, indicated that FfHda1 and FfHda2 regulate secondary metabolism, whereas FfHda4 is involved in developmental processes but is dispensable for secondary-metabolite production in F. fujikuroi. Single deletions of ffhda1 and ffhda2 resulted not only in an increase or decrease but also in derepression of metabolite biosynthesis under normally repressing conditions. Moreover, double deletion of both the ffhda1 and ffhda2 genes showed additive but also distinct phenotypes with regard to secondary-metabolite biosynthesis, and both genes are required for gibberellic acid (GA)-induced bakanae disease on the preferred host plant rice, as Δffhda1 Δffhda2 mutants resemble the uninfected control plant. Microarray analysis with a Δffhda1 mutant that has lost the major HDAC revealed differential expression of secondary-metabolite gene clusters, which was subsequently verified by a combination of chemical and biological approaches. These results indicate that HDACs are involved not only in gene silencing but also in the activation of some genes. Chromatin immunoprecipitation with the Δffhda1 mutant revealed significant alterations in the acetylation state of secondary-metabolite gene clusters compared to the wild type, thereby providing insights into the regulatory mechanism at the chromatin level. Altogether, manipulation of HDAC-encoding genes constitutes a powerful tool to control secondary metabolism in filamentous fungi.


Assuntos
Fusarium/enzimologia , Fusarium/metabolismo , Histona Desacetilases/metabolismo , Metabolismo Secundário/genética , Imunoprecipitação da Cromatina , Fusarium/patogenicidade , Deleção de Genes , Perfilação da Expressão Gênica , Regulação Fúngica da Expressão Gênica , Inativação Gênica , Histona Desacetilases/genética , Análise em Microsséries , Oryza/microbiologia , Doenças das Plantas/microbiologia , Ativação Transcricional , Virulência
3.
Fungal Genet Biol ; 49(7): 567-77, 2012 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-22626844

RESUMO

Fusarium fujikuroi and Fusarium proliferatum are two phylogenetically closely related species of the Gibberella fujikuroi species complex (GFC). In some cases, strains of these species can cross and produce a few ascospores. In this study, we analyzed 26 single ascospore isolates of an interspecific cross between F. fujikuroi C1995 and F. proliferatum D4854 for their ability to produce four secondary metabolites: gibberellins (GAs), the mycotoxins fusarin C and fumonisin B(1), and a family of red polyketides, the fusarubins. Both parental strains contain the biosynthetic genes for all four metabolites, but differ in their ability to produce these metabolites under certain conditions. F. fujikuroi C1995 produces GAs and fusarins, while F. proliferatum D4854 produces fumonisins and fusarubins. The segregation amongst the progeny of these traits is not the expected 1:1 Mendelian ratio. Only eight, six, three and three progeny, respectively, produce GAs, fusarins, fumonisin B(1) and fusarubins in amounts similar to those synthesized by the producing parental strain. Beside the eight highly GA(3)-producing progeny, some of the progeny produce small amounts of GAs, predominantly GA(1), although these strains contain the GA gene cluster of the non-GA-producing F. proliferatum parental strain. Some progeny had recombinant secondary metabolite profiles under the conditions examined indicating that interspecific crosses can yield secondary metabolite production profiles that are atypical of the parent species.


Assuntos
Cruzamentos Genéticos , Fusarium/genética , Genes Fúngicos , Redes e Vias Metabólicas/genética , Recombinação Genética , Giberelinas/genética , Giberelinas/metabolismo , Micotoxinas/genética , Micotoxinas/metabolismo , Fenótipo , Policetídeos/metabolismo
4.
Appl Environ Microbiol ; 71(10): 6014-25, 2005 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-16204516

RESUMO

Nine biological species, or mating populations (MPs), denoted by letters A to I, and at least 29 anamorphic Fusarium species have been identified within the Gibberella fujikuroi species complex. Members of this species complex are the only species of the genus Fusarium that contain the gibberellin (GA) biosynthetic gene cluster or at least parts of it. However, the ability of fusaria to produce GAs is so far restricted to Fusarium fujikuroi, although at least six other MPs contain all the genes of the GA biosynthetic gene cluster. Members of Fusarium proliferatum, the closest related species, have lost the ability to produce GAs as a result of the accumulation of several mutations in the coding and 5' noncoding regions of genes P450-4 and P450-1, both encoding cytochrome P450 monooxygenases, resulting in metabolic blocks at the early stages of GA biosynthesis. In this study, we have determined additional enzymatic blocks at the first specific steps in the GA biosynthesis pathway of F. proliferatum: the synthesis of geranylgeranyl diphosphate and the synthesis of ent-kaurene. Complementation of these enzymatic blocks by transferring the corresponding genes from GA-producing F. fujikuroi to F. proliferatum resulted in the restoration of GA production. We discuss the reasons for Fusarium species outside the G. fujikuroi species complex having no GA biosynthetic genes, whereas species distantly related to Fusarium, e.g., Sphaceloma spp. and Phaeosphaeria spp., produce GAs.


Assuntos
Diterpenos do Tipo Caurano/biossíntese , Fusarium/enzimologia , Fusarium/genética , Teste de Complementação Genética , Giberelinas/biossíntese , Fosfatos de Poli-Isoprenil/biossíntese , Alquil e Aril Transferases/química , Alquil e Aril Transferases/genética , Alquil e Aril Transferases/metabolismo , Sequência de Aminoácidos , Sistema Enzimático do Citocromo P-450/química , Sistema Enzimático do Citocromo P-450/genética , Sistema Enzimático do Citocromo P-450/metabolismo , Diterpenos , Farnesiltranstransferase/química , Farnesiltranstransferase/genética , Farnesiltranstransferase/metabolismo , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Oxigenases de Função Mista/química , Oxigenases de Função Mista/genética , Oxigenases de Função Mista/metabolismo , Dados de Sequência Molecular , Proteínas de Plantas/química , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Análise de Sequência de DNA
5.
Mol Genet Genomics ; 274(3): 217-28, 2005 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-16049681

RESUMO

The ascomycete Fusarium fujikuroi produces carotenoids by means of the enzymes encoded by three car genes. The enzymes encoded by carRA and carB are responsible of the synthesis of beta-carotene and torulene, respectively, while the product encoded by carT cleaves torulene to produce the acidic xanthophyll neurosporaxanthin. carRA and carB are found in a cluster with a third gene, carO, which codes for an opsin-like protein. However, no information is available on the sequence or chromosomal location of carT, which has been identified only by mutant analysis. Transcription of the three clustered genes is stimulated by light and by mutations in a regulatory gene, leading to overproduction of carotenoids. We have now identified a fourth gene in the car cluster, called carX, which codes for a protein similar to known carotenoid-cleaving oxygenases. carX is transcribed divergently from carRA, and exhibits the same transcriptional pattern as carRA, carB and carO. Targeted deletion of carX resulted in a phenotype characterized by a significant increase in the overall carotenoid content. In the dark, the carX mutants accumulate at least five times more carotenoids than the wild type, and exhibit partial derepression of carRA and carB transcription. The mutants also show more intense pigmentation in the light, but the increase in the carotenoid content relative to the wild type is less than twofold. Under these conditions, the mutants also show a relative increase in the amounts of phytoene and cyclic carotenoids formed, suggesting that CarRA activity is enhanced.


Assuntos
Fusarium/genética , Família Multigênica/genética , Oxigenases/genética , Filogenia , Sequência de Aminoácidos , Sequência de Bases , Northern Blotting , Southern Blotting , Carotenoides/biossíntese , Carotenoides/metabolismo , Análise por Conglomerados , Primers do DNA , Fusarium/enzimologia , Componentes do Gene , Vetores Genéticos/genética , Dados de Sequência Molecular , Mutação/genética , Oxigenases/química , Oxigenases/metabolismo , Alinhamento de Sequência , Análise de Sequência de DNA
6.
Appl Environ Microbiol ; 71(3): 1462-72, 2005 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-15746349

RESUMO

Gibberella fujikuroi is a species complex with at least nine different biological species, termed mating populations (MPs) A to I (MP-A to MP-I), known to produce many different secondary metabolites. So far, gibberellin (GA) production is restricted to Fusarium fujikuroi (G. fujikuroi MP-C), although at least five other MPs contain all biosynthetic genes. Here, we analyze the GA gene cluster and GA pathway in the closest related species, Fusarium proliferatum (MP-D), and demonstrate that the GA genes share a high degree of sequence homology with the corresponding genes of MP-C. The GA production capacity was restored after integration of the entire GA gene cluster from MP-C, indicating the existence of an active regulation system in F. proliferatum. The results further indicate that one reason for the loss of GA production is the accumulation of several mutations in the coding and 5' noncoding regions of the ent-kaurene oxidase gene, P450-4.


Assuntos
Sistema Enzimático do Citocromo P-450/genética , Fusarium/enzimologia , Fusarium/genética , Genes Fúngicos , Gibberella/enzimologia , Gibberella/genética , Família Multigênica , Oxigenases/genética , Sequência de Bases , Sistema Enzimático do Citocromo P-450/metabolismo , DNA Fúngico/genética , Genes Reguladores , Genes Reporter , Giberelinas/biossíntese , Dados de Sequência Molecular , Oxigenases/metabolismo , Regiões Promotoras Genéticas , Homologia de Sequência do Ácido Nucleico , Especificidade da Espécie
7.
Mol Microbiol ; 53(6): 1661-75, 2004 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-15341646

RESUMO

In Gibberella fujikuroi, the gibberellin (GA) and bikaverin biosynthesis are under control of nitrogen metabolite repression. However, the signalling components acting upstream of AREA are still unknown. We investigated the role of glutamine synthetase (GS) both as an enzyme and as a possible regulator in the nitrogen regulation system. We cloned and replaced the GS-encoding gene, glnA-Gf. The mutants grow with a phenotype different from the wild type in the presence of glutamine. They were unable to express nitrogen-repressed GA and bikaverin biosynthetic genes even under nitrogen starvation conditions. Complementation with the glnA-Gf wild-type copy fully restored GS activity, the expression of secondary metabolism genes, and the production of GAs and the red pigment, bikaverin. In order to find more target genes of GS, differential cDNA-screening and differential hybridization of macroarrays were performed using cDNA from the wild type and DeltaglnA mutant as probes. Several genes were dramatically up- or downregulated in the mutant. Among them are genes involved in N- and C-catabolism, and in transcriptional and translation control. Some of these genes are also under AREA control. Treatment with the GS inhibitor l-methionine sulphoximine resulted in similar expression patterns as in the glnA mutant with ammonium as nitrogen source, whereas glutamine can overcome the up- or downregulation of most but not all of the target genes. These findings suggest that not only glutamine, but also GS itself might play an important role in nitrogen metabolite repression.


Assuntos
Regulação Fúngica da Expressão Gênica , Gibberella/genética , Gibberella/metabolismo , Glutamato-Amônia Ligase/genética , Nitrogênio/metabolismo , Transdução de Sinais/fisiologia , Perfilação da Expressão Gênica , Teste de Complementação Genética , Giberelinas/química , Giberelinas/metabolismo , Glutamato-Amônia Ligase/metabolismo , Glutamina/metabolismo , Metionina Sulfoximina/metabolismo , Dados de Sequência Molecular , Análise de Sequência com Séries de Oligonucleotídeos , Fenótipo , Compostos de Amônio Quaternário/metabolismo , Transformação Genética , Xantonas/metabolismo
8.
Mol Genet Genomics ; 267(5): 593-602, 2002 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-12172798

RESUMO

Phytoene synthase, phytoene dehydrogenase and carotene cyclase are three of the four enzyme activities needed to produce the acidic carotenoid neurosporaxanthin from the precursor geranylgeranyl pyrophosphate. In the filamentous fungus Fusarium fujikuroi, these three enzyme activities are encoded by two closely linked genes, carRA and carB, oriented in the same direction in the genome. The two genes are separated by 548 bp and code for two polypeptides of 612 and 541 amino acids, respectively, which are highly similar to the homologous proteins from other filamentous fungi. The ORF of carRA contains a 96-bp insertion that is absent in the other fungal homologues. The 32 additional residues are located in one of the two repeated domains responsible for the cyclase activity in the homologous fungal proteins. We have determined the function of carRA by gene disruption. The resulting mutants were albino and had lost the ability to produce phytoene, as expected from the simultaneous loss of phytoene synthase and carotene cyclase. In the same experiments, we also found transformants in which carB had been deleted. These mutants accumulate phytoene, confirming the function of the gene previously shown by gene-targeted mutagenesis. Expression of carRA and carB is strongly induced by light. Loss of carB or disruption of the carRA ORF led to enhanced expression of the carRA gene, suggesting the existence of a feedback regulatory mechanism.


Assuntos
Alquil e Aril Transferases/genética , Fusarium/genética , Família Multigênica , Oxirredutases/genética , Northern Blotting , Carotenoides/biossíntese , Carotenoides/genética , Regulação da Expressão Gênica , Geranil-Geranildifosfato Geranil-Geraniltransferase , Regiões Promotoras Genéticas , Análise de Sequência de DNA
9.
Curr Genet ; 39(5-6): 377-83, 2001 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-11525413

RESUMO

The genes of the gibberellin (GA) biosynthesis pathway in Gibberella fujikuroi are organized in a gene cluster consisting of at least seven genes. Here we report the cloning and characterization of smt, a gene encoding a membrane transporter of the major facilitator super-family 1, which is located next to the GA gene cluster. Since pathway-specific transporters occur frequently in prokaryotic and fungal antibiotic and toxin clusters, smt was thought to be involved in GA secretion. The gene is expressed in mycelium grown under GA-production conditions, but not when the GA biosynthesis is repressed by high amounts of ammonium. To investigate the function of SMT, gene replacement experiments were performed. The smt-mutants did not show any reduction in the GA yield; and gibberellic acid or its precursors did not influence the gene expression. However, sugar alcohols, such as myo-inositol, sorbitol and mannitol, induced the expression of smt. The results demonstrate that the smt gene does not play an essential role in biosynthesis and secretion of GAs in G. fujikuroi, despite the location adjacent to the GA gene cluster.


Assuntos
Proteínas Fúngicas/genética , Gibberella/genética , Giberelinas/genética , DNA Fúngico/genética , Genes Fúngicos , Filogenia , RNA Fúngico/genética , Mapeamento por Restrição , Transformação Genética
10.
Appl Environ Microbiol ; 67(8): 3514-22, 2001 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-11472927

RESUMO

At least five genes of the gibberellin (GA) biosynthesis pathway are clustered on chromosome 4 of Gibberella fujikuroi; these genes encode the bifunctional ent-copalyl diphosphate synthase/ent-kaurene synthase, a GA-specific geranylgeranyl diphosphate synthase, and three cytochrome P450 monooxygenases. We now describe a fourth cytochrome P450 monooxygenase gene (P450-4). Gas chromatography-mass spectrometry analysis of extracts of mycelia and culture fluid of a P450-4 knockout mutant identified ent-kaurene as the only intermediate of the GA pathway. Incubations with radiolabeled precursors showed that the metabolism of ent-kaurene, ent-kaurenol, and ent-kaurenal was blocked in the transformants, whereas ent-kaurenoic acid was metabolized efficiently to GA(4). The GA-deficient mutant strain SG139, which lacks the 30-kb GA biosynthesis gene cluster, converted ent-kaurene to ent-kaurenoic acid after transformation with P450-4. The B1-41a mutant, described as blocked between ent-kaurenal and ent-kaurenoic acid, was fully complemented by P450-4. There is a single nucleotide difference between the sequence of the B1-41a and wild-type P450-4 alleles at the 3' consensus sequence of intron 2 in the mutant, resulting in reduced levels of active protein due to a splicing defect in the mutant. These data suggest that P450-4 encodes a multifunctional ent-kaurene oxidase catalyzing all three oxidation steps between ent-kaurene and ent-kaurenoic acid.


Assuntos
Sistema Enzimático do Citocromo P-450/genética , Sistema Enzimático do Citocromo P-450/metabolismo , Gibberella/enzimologia , Oxigenases/genética , Oxigenases/metabolismo , Sequência de Aminoácidos , Clonagem Molecular , Meios de Cultura , Sistema Enzimático do Citocromo P-450/química , Gibberella/genética , Gibberella/crescimento & desenvolvimento , Giberelinas/biossíntese , Dados de Sequência Molecular , Mutação , Oxigenases/química , Alinhamento de Sequência , Análise de Sequência de DNA , Raios Ultravioleta
11.
Proc Natl Acad Sci U S A ; 98(10): 5838-43, 2001 May 08.
Artigo em Inglês | MEDLINE | ID: mdl-11320210

RESUMO

Recent studies have shown that the genes of the gibberellin (GA) biosynthesis pathway in the fungus Gibberella fujikuroi are organized in a cluster of at least seven genes. P450-1 is one of four cytochrome P450 monooxygenase genes in this cluster. Disruption of the P450-1 gene in the GA-producing wild-type strain IMI 58289 led to total loss of GA production. Analysis of the P450-1-disrupted mutants indicated that GA biosynthesis was blocked immediately after ent-kaurenoic acid. The function of the P450-1 gene product was investigated further by inserting the gene into mutants of G. fujikuroi that lack the entire GA gene cluster; the gene was highly expressed under GA production conditions in the absence of the other GA-biosynthesis genes. Cultures of transformants containing P450-1 converted ent-[(14)C]kaurenoic acid efficiently into [(14)C]GA(14), indicating that P450-1 catalyzes four sequential steps in the GA-biosynthetic pathway: 7beta-hydroxylation, contraction of ring B by oxidation at C-6, 3beta-hydroxylation, and oxidation at C-7. The GA precursors ent-7alpha-hydroxy[(14)C]kaurenoic acid, [(14)C]GA(12)-aldehyde, and [(14)C]GA(12) were also converted to [(14)C]GA(14). In addition, there is an indication that P450-1 may also be involved in the formation of the kaurenolides and fujenoic acids, which are by-products of GA biosynthesis in G. fujikuroi. Thus, P450-1 displays remarkable multifunctionality and may be responsible for the formation of 12 products.


Assuntos
Sistema Enzimático do Citocromo P-450/genética , Gibberella/genética , Giberelinas/biossíntese , Sequência de Bases , Northern Blotting , Southern Blotting , Primers do DNA , Gibberella/enzimologia , Reação em Cadeia da Polimerase
12.
Mol Plant Microbe Interact ; 14(11): 1293-302, 2001 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-11763127

RESUMO

To identify signal transduction pathways of the gray mold fungus Botrytis cinerea involved in host infection, we used heterologous hybridization and a polymerase chain reaction (PCR)-based approach to isolate two genes (bcg1 and bcg2) encoding alpha subunits of heterotrimeric GTP-binding proteins. Both genes have homologues in other fungi: bcg1 is a member of the G alpha(i) class, whereas bcg2 has similarities to the magC gene of Magnaporthe grisea and the gna-2 gene of Neurospora crassa. Reverse-transcription (RT)-PCR experiments showed clearly that both genes are expressed at very early stages in infected bean leaves. Gene replacement experiments were performed for both genes. bcg1 null mutants differ in colony morphology from the wild-type strain, do not secrete extracellular proteases, and show clearly reduced pathogenicity on bean and tomato. Conidia germination and penetration of plant tissue is not disturbed in bcg1 mutants, but the infection process stops after formation of primary lesions. In contrast, bcg2 mutants show wild-type colony morphology in axenic culture and are only slightly reduced in pathogenicity. Complementation of bcg1 mutants with the wild-type gene copy led to the full recovery of colony morphology, protease secretion, and pathogenicity on both host plants. Application of exogenous cyclic AMP restored the wild-type growth pattern of bcg1 mutants, but not the protease secretion, implicating an essential role of BCG1 in different signaling pathways.


Assuntos
Botrytis/metabolismo , Botrytis/patogenicidade , Fabaceae/microbiologia , Proteínas Heterotriméricas de Ligação ao GTP/metabolismo , Botrytis/genética , Clonagem Molecular , Fabaceae/crescimento & desenvolvimento , Regulação da Expressão Gênica no Desenvolvimento , Marcação de Genes , Genes Fúngicos , Teste de Complementação Genética , Proteínas Heterotriméricas de Ligação ao GTP/genética , Solanum lycopersicum/crescimento & desenvolvimento , Solanum lycopersicum/microbiologia , Mutação , Doenças das Plantas/microbiologia , Transdução de Sinais
13.
FEMS Microbiol Lett ; 184(1): 9-15, 2000 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-10689158

RESUMO

The creA genes of two plant pathogenic fungi, the gibberellin-producing rice pathogen Gibberella fujikuroi and the gray mold Botrytis cinerea, were isolated and characterized. The deduced amino acid sequences of both glucose repressors are 64% identical to each other and 59% (G. fujikuroi) and 61% (B. cinerea) identical to the CreA protein of Aspergillus nidulans. The zinc finger regions of the Gibberella and Botrytis CreA proteins shared 98% identity with the corresponding zinc finger region of the A. nidulans protein, and studies by complementation of a creA null mutant of A. nidulans showed that the proteins are functional homologues of A. nidulans CreA. Northern blot analysis revealed that creA transcript levels are independent of the carbon source in both fungi.


Assuntos
Botrytis/genética , Carbono/metabolismo , Proteínas Fúngicas/genética , Gibberella/genética , Proteínas Repressoras/genética , Sequência de Aminoácidos , Aspergillus nidulans/genética , Sequência de Bases , Northern Blotting , Botrytis/metabolismo , DNA Fúngico/química , DNA Fúngico/genética , DNA Fúngico/isolamento & purificação , Proteínas Fúngicas/fisiologia , Regulação Fúngica da Expressão Gênica , Teste de Complementação Genética , Gibberella/metabolismo , Dados de Sequência Molecular , Plantas/microbiologia , RNA Fúngico/genética , RNA Fúngico/metabolismo , Proteínas Repressoras/fisiologia , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Homologia de Sequência do Ácido Nucleico
14.
Appl Microbiol Biotechnol ; 52(3): 298-310, 1999 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-10531641

RESUMO

Gibberellins (GAs) are a large family of isoprenoid plant hormones hormones, some of which are bioactive growth regulators, controlling seed germination, stem elongation, and flowering. The rice pathogen Gibberella fujikuroi (mating population C) is able to produce large amounts of GAs, especially the bioactive compounds gibberellic acid (GA3) and its precursors, GA4 and GA7. The main steps of the biosynthetic pathway have long been established from the identification of intermediates in wild-type G. fujikuroi and mutant strains. However, the genetics of the fungus have been rather under-developed, and molecular genetic studies of the GA pathway started just recently. The progress in researching GA biosynthesis in the last 2 years resulted primarily from development of the molecular tools, e.g. transformation systems for the fungus, and cloning the genes encoding GA biosynthesis enzymes, such as the bifunctional ent-copalyl diphosphate/kaurene synthase and several cytochrome P450 monooxygenases. The availability of these genes opened new horizons both for detailed study of the pathway and the regulation mechanisms at the molecular level, and for modern strain improvement programs. This review gives a short overview of the well-known physiological and biochemical studies and concentrates mainly on the new molecular genetic data from GA research, including new information on the regulation of GA biosynthesis.


Assuntos
Gibberella/metabolismo , Giberelinas/biossíntese , Aerobiose , Sequência de Aminoácidos , Carbono/metabolismo , Clonagem Molecular , Enzimas/genética , Enzimas/metabolismo , Fermentação , Proteínas Fúngicas/genética , Proteínas Fúngicas/metabolismo , Genes Fúngicos , Microbiologia Industrial/economia , Microbiologia Industrial/métodos , Dados de Sequência Molecular , Nitrogênio/metabolismo , Oryza/microbiologia , Especificidade da Espécie , Dedos de Zinco/genética
15.
Appl Environ Microbiol ; 65(6): 2558-64, 1999 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-10347043

RESUMO

We induced mutants of Gibberella fujikuroi deficient in gibberellin (GA) biosynthesis by transformation-mediated mutagenesis with the vector pAN7-1. We recovered 24 GA-defective mutants in one of nine transformation experiments performed without the addition of a restriction enzyme. Each mutant had a similar Southern blot pattern, suggesting the integration of the vector into the same site. The addition of a restriction enzyme by restriction enzyme-mediated integration (REMI) significantly increased the transformation rate and the rate of single-copy integration events. Of 1,600 REMI transformants, two produced no GAs. Both mutants had multiple copies of the vector pAN7-1 and one had a Southern blot pattern similar to those of the 24 conventionally transformed GA-deficient mutants. Biochemical analysis of the two REMI mutants confirmed that they cannot produce ent-kaurene, the first specific intermediate of the GA pathway. Feeding the radioactively labelled precursors ent-kaurene and GA12-aldehyde followed by high-performance liquid chromatography and gas chromatography-mass spectrometry analysis showed that neither of these intermediates was converted to GAs in the mutants. Southern blot analysis and pulsed-field gel electrophoresis of the transformants using the bifunctional ent-copalyl diphosphate/ent-kaurene synthase gene (cps/ks) and the flanking regions as probes revealed a large deletion in the GA-deficient REMI transformants and in the GA-deficient transformants obtained by conventional insertional transformation. We conclude that transformation procedures with and without the addition of restriction enzymes can lead to insertion-mediated mutations and to deletions and chromosome translocations.


Assuntos
Gibberella/genética , Giberelinas/biossíntese , Giberelinas/genética , Mutagênese Insercional/métodos , Transformação Genética , Southern Blotting , Enzimas de Restrição do DNA/metabolismo , Eletroforese em Gel de Campo Pulsado , Deleção de Genes , Genes Fúngicos , Gibberella/crescimento & desenvolvimento , Gibberella/metabolismo
16.
Mol Gen Genet ; 261(1): 106-14, 1999 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-10071216

RESUMO

The gene areA-GF, a homologue of the major nitrogen regulatory genes nit-2, areA, nre and NUT1 of Neurospora crassa, Aspergillus nidulans, Penicillium chrysogenum and Magnaporthe grisea, respectively, was cloned from the gibberellin (GA)-producing rice pathogen Gibberella fujikuroi. areA-GF encodes a protein of 972 amino acid residues which contains a single putative zinc finger DNA-binding domain that is at least 98% identical to the zinc finger domains of the homologous fungal proteins. The areA-GF gene has been shown to be functional in N. crassa by heterologous complementation of a RIP induced nit-2 mutant. The transformation rate was nearly as high as in a homologous complementation control. Transformants were able to utilize nitrate and expressed a normally regulated nitrate reductase activity. To generate areA-GF- mutants, gene replacement experiments were performed using a linearized replacement vector carrying the hygromycin B phosphotransferase (hph) gene. The replacement of the zinc finger by the hygromycin cassette resulted in transformants which were unable to utilize nitrogen sources other than ammonium and glutamine, and gave significantly reduced gibberellin production yields. Complementation of such a mutant with the wild-type gene led to the full recovery of gibberellin production.


Assuntos
DNA Fúngico/isolamento & purificação , Proteínas Fúngicas/genética , Genes Fúngicos/genética , Gibberella/genética , Fatores de Transcrição/genética , Sequência de Aminoácidos , Clonagem Molecular , DNA Fúngico/química , DNA Fúngico/genética , Proteínas de Ligação a DNA/genética , Proteínas Fúngicas/fisiologia , Regulação Fúngica da Expressão Gênica , Marcação de Genes , Teste de Complementação Genética , Giberelinas/biossíntese , Dados de Sequência Molecular , Mutação , Neurospora crassa/genética , Nitrato Redutase , Nitrato Redutases/genética , Nitrogênio/metabolismo , Alinhamento de Sequência , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Fatores de Transcrição/fisiologia
17.
Curr Genet ; 34(3): 234-40, 1998 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-9745028

RESUMO

The gene coding for copalyl diphosphate synthase (CPS), which represents the first gene of the gibberellin pathway, was isolated from the rice pathogen Gibberella fujikuroi. This fungus is used commercially for the production of gibberellic acid and related gibberellins. CPS is a terpene cyclase which catalyzes the first specific step of the gibberellin (GA) pathway as it branches off from the general isoprenoid (biosynthetic) pathway at geranylgeranyl disphosphate (GGDP). A cDNA fragment of the cps gene from the fungus G. fujikuroi was amplified by RT-PCR using oligonucleotides based on amino-acid sequences which were conserved between the plant CPSs and the bifunctional CPS/KS of the fungus Phaeosphaeria sp. L487. A 588-bp fragment obtained with nested PCR was used to isolate the corresponding genomic clone of the cps gene from the wild-type lambda-library. This gene consists of three exons and two introns. The three exons are 2877 bp long and encode 959 amino-acid residues. The protein shares 48% identity with the bifunctional Phaeosphaeria sp. L487 FCPS and between 16% and 18% identity to the corresponding plant CPSs. Expression of the G. fujikuroi cps gene is strongly enhanced under conditions optimized for gibberellin biosynthesis and is reduced when high amounts of ammonium are present in the medium. Gene disruption, followed by gibberellin assays and Southern-blot analysis of the transformants, demonstrated clearly that the cloned gene has the expected function in the biosynthesis of fungal gibberellins.


Assuntos
Alquil e Aril Transferases/química , Gibberella/enzimologia , Giberelinas/biossíntese , Proteínas de Plantas , Sequência de Aminoácidos , Clonagem Molecular , Proteínas Fúngicas/química , Regulação Fúngica da Expressão Gênica/genética , Dados de Sequência Molecular , Oryza/microbiologia , RNA Mensageiro/metabolismo , Mapeamento por Restrição , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos
18.
Fungal Genet Biol ; 25(3): 157-70, 1998 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-9917370

RESUMO

Differential screening of a Gibberella fujikuroi cDNA library was used to successfully clone and identify genes involved in the pathway of gibberellin biosynthesis. Several cDNA clones that hybridized preferentially to a cDNA probe prepared from mycelium induced for gibberellin production were isolated and characterized. The deduced amino acid sequences of two (identical) clones contained the conserved heme-binding motif of cytochrome P450 monooxygenases (FXXGXXXCXG). One of these cDNA fragments was used as a homologous probe for the screening of a genomic library. A hybridizing 6.7-kb genomic SalI fragment was cloned into pUC19. The sequencing of this clone revealed that a second cytochrome P450 monooxygenase gene was closely linked to the first one. Since at least four cytochrome P450 monooxygenase-catalyzed steps are involved in the synthesis of gibberellins, chromosome walking was performed to find a further gene of this family or other genes involved in gibberellin pathway. Next to the two P450 monooxygenase genes, a putative geranylgeranyl diphosphate synthase gene, the copalyl diphosphate synthase gene, which is the first specific gene of the gibberellin pathway, and a third P450 monooxygenase gene were identified. These results suggest that at least some of the genes involved in the biosynthesis of gibberellins are closely linked in a gene cluster in G. fujikuroi, as has been recently found for other "dispensable" pathways in fungi.


Assuntos
Genes Fúngicos , Gibberella/enzimologia , Gibberella/genética , Giberelinas/biossíntese , Proteínas de Plantas , Alquil e Aril Transferases/genética , Alquil e Aril Transferases/metabolismo , Sequência de Aminoácidos , Northern Blotting , Southern Blotting , Sistema Enzimático do Citocromo P-450/genética , Sistema Enzimático do Citocromo P-450/metabolismo , DNA Complementar/análise , Farnesiltranstransferase , Proteínas Fúngicas/biossíntese , Biblioteca Gênica , Dados de Sequência Molecular , Família Multigênica , Mapeamento Físico do Cromossomo , Plasmídeos/genética , RNA Mensageiro/análise , Análise de Sequência de DNA
19.
Mol Gen Genet ; 255(1): 96-105, 1997 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-9230902

RESUMO

The rice pathogen, Gibberella fujikuroi, produces large amounts of gibberellins, a group of natural plant hormones, which induce the superelongation (bakanae) disease of rice. Gibberellins are diterpenoid compounds which are synthesized via the isoprenoid pathway. Here we report the isolation and molecular characterization of the geranylgeranyl diphosphate synthase (ggs) gene from G. fujikuroi. Geranylgeranyl diphosphate synthase is a key enzyme in isoprenoid biosynthesis. Southern blot analysis showed that G. fujikuroi has a single copy of the ggs gene, which is not linked to the farnesyl diphosphate synthase gene. This indicates that the genes of the isoprenoid pathway are not clustered in the fungal genome. The ggs gene is not interrupted by an intron and codes for a polypetide of 418 amino acids. Peptide sequence comparison showed a high degree of similarity to the corresponding Neurospora crassa gene (al-3). However, transcription analyses revealed that the ggs gene, in contrast to the analogous N. crassa gene, is not regulated by blue light. Ammonium and glucose did not affect the transcription of the G. fujikuroi ggs gene, indicating that it is not subject to nitrogen and carbon catabolite repression. The G. fujikuroi gene complements a N. crassa al-3 mutant.


Assuntos
Alquil e Aril Transferases , Genes Fúngicos , Gibberella/genética , Transferases/genética , Sequência de Aminoácidos , Sequência de Bases , Southern Blotting , Carotenoides/biossíntese , Farnesiltranstransferase , Dosagem de Genes , Regulação Fúngica da Expressão Gênica , Teste de Complementação Genética , Gibberella/enzimologia , Giberelinas/biossíntese , Glucose/metabolismo , Dados de Sequência Molecular , Neurospora crassa/enzimologia , Neurospora crassa/genética , Compostos de Amônio Quaternário/metabolismo , Alinhamento de Sequência , Transferases/biossíntese , Transferases/química
20.
Curr Genet ; 31(1): 38-47, 1997 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-9000379

RESUMO

3-Hydroxy-3-methylglutaryl-CoA reductase (HMGR) is the first specific enzyme of the isoprenoid pathway, which leads to several classes of primary and secondary metabolites such as sterols, quinones, carotenoids and gibberellins. The structural gene of HMG-CoA reductase was isolated from the ascomycetous fungus Gibberella fujikuroi. Additionally, the most conserved region of this gene was also isolated from another plant pathogenic fungus, Sphaceloma manihoticola. Both ascomycetous fungi use the plant hormone gibberellin to induce an elongation of infected host plants, and in the case of S. manihoticola of plant tumors. Sequence analysis revealed a high degree of similarity between the deduced amino-acid sequences in the C-terminal catalytic domains of all known HMG-CoA reductases, but the highest degree was found between the sequences of both analysed ascomycetes. In contrast to Saccharomyces cerevisiae, Ustilago maydis and plants, G. fujikuroi and S. manihoticola possess only a single copy of this gene, although the product of HMGR (mevalonate) is the precursor for essential sterol and quinone biosynthesis and secondary metabolites such as gibberellins. RNA-blot and hybridization experiments showed that gene expression is not influenced by either glucose or ammonium excess.


Assuntos
Genes Fúngicos , Gibberella/enzimologia , Gibberella/genética , Inibidores de Hidroximetilglutaril-CoA Redutases/química , Sequência de Aminoácidos , Ascomicetos/enzimologia , Ascomicetos/genética , Bacteriófago lambda , Sequência de Bases , Northern Blotting , Southern Blotting , Mapeamento Cromossômico , Clonagem Molecular , DNA Fúngico/genética , Regulação Enzimológica da Expressão Gênica , Regulação Fúngica da Expressão Gênica , Biblioteca Gênica , Giberelinas/metabolismo , Dados de Sequência Molecular , Hibridização de Ácido Nucleico , Filogenia , Plantas/enzimologia , Plantas/genética , Reação em Cadeia da Polimerase , RNA Fúngico/genética , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/genética , Análise de Sequência de DNA , Homologia de Sequência de Aminoácidos , Ustilago/enzimologia , Ustilago/genética
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