Efficacy and Stability of Integrating Fungicide and Cultivar Resistance to Manage Fusarium Head Blight and Deoxynivalenol in Wheat.

Integration of host resistance and prothioconazole + tebuconazole fungicide application at anthesis to manage Fusarium head blight (FHB) and deoxynivalenol (DON) in wheat was evaluated using data from over 40 trials in 12 U.S. states. Means of FHB index (index) and DON from up to six resistance class-fungicide management combinations per trial (susceptible treated [S_TR] and untreated [S_UT]; moderately susceptible treated [MS_TR] and untreated [MS_UT]; moderately resistant treated [MR_TR] and untreated [MR_UT]) were used in multivariate meta-analyses, and mean log response ratios across trials were estimated and transformed to estimate mean percent control ( ) due to the management combinations relative to S_UT. All combinations led to a significant reduction in index and DON (P < 0.001). MR_TR was the most effective combination, with a of 76% for index and 71% for DON, followed by MS_TR (71 and 58%, respectively), MR_UT (54 and 51%, respectively), S_TR (53 and 39%, respectively), and MS_UT (43 and 30%, respectively). Calculations based on the principle of treatment independence showed that the combination of fungicide application and resistance was additive in terms of percent control for index and DON. Management combinations were ranked based on percent control relative to S_UT within each trial, and nonparametric analyses were performed to determine management combination stability across environments (trials) using the Kendall coefficient of concordance (W). There was a significant concordance of management combinations for both index and DON (P < 0.001), indicating a nonrandom ranking across environments and relatively low variability in the within-environment ranking of management combinations. MR_TR had the highest mean rank (best control relative to S_UT) and was one of the most stable management combinations across environments, with low rank stability variance (0.99 for index and 0.67 for DON). MS_UT had the lowest mean rank (poorest control) but was also one of the most stable management combinations. Based on Piepho's nonparametric rank-based variance homogeneity U test, there was an interaction of management combination and environment for index (P = 0.011) but not for DON (P = 0.147), indicating that the rank ordering for index depended somewhat on environment. In conclusion, although the magnitude of percent control will likely vary among environments, integrating a single tebuconazole + prothioconazole application at anthesis with cultivar resistance will be a more effective and stable management practice for both index and DON than either approach used alone.

First Report of Anthracnose Caused by Colletotrichum caudatum on Indiangrass in New York.

Indiangrass or yellow indiangrass (Sorghastrum nutans L.) is a warm-season, perennial grass grown for livestock forage, erosion control, wildlife food and cover, landscaping, and more recently, as a biofuel crop. In August of 2007, foliar lesions were observed on plants within mature stands of a number of cultivars and populations of indiangrass at the USDA-NRCS Plant Materials Center in Big Flats (Chemung County), NY. In subsequent years, similar lesions were observed in both mature and immature (less than 3 years old) stands of indiangrass in Chemung and Tompkins counties. Lesions were elliptical to irregular with distinct or diffuse purple margins often surrounded by tan-to-maroon halos and were sometimes observed on the leaf sheath and stem. Lesions were generally less than 2 cm long, approximately 2 mm wide, and often coalesced when disease was severe. Centers became necrotic and often developed numerous acervuli with black setae. After 2 to 5 days of incubation in moist chambers, symptomatic leaf tissue developed acervuli containing masses of cream-colored spores. Spores streaked onto potato dextrose agar containing streptomycin gave rise to cultures with gray mycelium often accompanied by sporulating avervuli. The fungus was identified as Colletotrichum caudatum (Peck ex Sacc.) Peck on the basis of cultural characteristics and conidial morphology (2). Conidia were one celled, hyaline, fusiform, and falcate with a filiform, caudate appendage. Conidial length averaged 28 µm (21 to 45 µm), width averaged 5 µm (4 to 6 µm), and the appendage averaged 15 µm (5 to 29 µm) long. The sequence of the rDNA internal transcribed spacer (ITS) regions of an isolate from 'Rumsey' indiangrass in Chemung County, NY (Cc004NY07, GenBank Accession No. JF437056) exhibited 98% nucleotide identity to C. caudatum isolates (GenBank Accession Nos. AB042304 and AB042305) collected from bentgrass (Agrostis sp. L.) and cogongrass (Imperata cylindrica L.) in Japan (1). Colletotrichum species from grasses are not discriminated solely on ITS sequence, but the unique caudate appendage is diagnostic of C. caudatum. Pathogenicity of the sequenced isolate plus a second isolate from 'Rumsey' indiangrass (Cc006NY07) was evaluated in greenhouse experiments. Eight-week-old plants of indiangrass population 'PA Ecotype' (Ernst Conservation Seeds, Meadville, PA) were inoculated with conidial suspensions (2 × 106 conidia/ml) of C. caudatum. Twelve plants were sprayed with either inoculum or sterile water (as the control treatment) until runoff with a spray bottle. After inoculum had dried, plants were placed in a mist chamber for 48 h. Plants were then returned to the greenhouse and observed for disease development, which occurred within 1 week of inoculation. No symptoms developed on the control plants. Foliar lesions closely resembled those observed in the field. C. caudatum was reisolated consistently from symptomatic tissue collected from greenhouse experiments. To our knowledge, this is the first report of C. caudatum causing anthracnose on indiangrass in New York, though it has been reported in the adjoining states of New Jersey (2) and Pennsylvania (3). Indiangrass cultivars should be assessed for susceptibility to regional isolates of C. caudatum prior to expanded regional production of indiangrass as a biofuel crop. References: (1) J. Moriwaki et al. J. Gen. Plant Pathol. 68:307, 2002. (2) T. R. Nag Raj. Can. J. Bot. 51:2463, 1973. (3) K. E. Zeiders. Plant Dis. 71:348, 1987.

First Report of a Leaf Spot Caused by Bipolaris oryzae on Switchgrass in New York.

Switchgrass (Panicum virgatum L.) is a perennial grass with biofuel potential. From 2007 to 2010, foliar lesions were observed on first year and mature stands of switchgrass in various locations in New York. Foliar lesions were purple, elliptical (up to 1 cm) with either distinct or diffuse margins, and occasionally with yellow halos and/or white necrotic centers. After 2 to 5 days of moist chamber incubation, surface-sterilized, symptomatic leaf tissue produced conidia that when streaked onto potato dextrose agar containing 0.3 g of streptomycin per liter gave rise to cultures with gray-to-black mycelium that developed brown conidia. The fungus was identified as Bipolaris oryzae (Breda de Haan) Shoemaker on the basis of conidial morphology (1,2). Conidiophores were brown, straight, cylindrical, and multiseptate. Conidia were brown, curved, ellipsoidal tapering to rounded ends, with 3 to 14 septa. Conidia averaged 105 µm (54 to 160 µm) long and 16 µm (12 to 20 µm) wide. Sequences of the glyceraldehyde-3-phosphate dehydrogenase (GDP) gene of three isolates from Tompkins County (Cornell Accession and corresponding GenBank Nos.: Bo005NY07 [cv. Cave-in-Rock], JF521648; Bo006NY07 [cv. Kanlow], JF521649; and Bo038NY07 [cv. Shawnee], JF521650) exhibited 100% nucleotide identity to B. oryzae isolates (GenBank Nos. AY277282-AY277285) collected from switchgrass in North Dakota (1). Sequences of the rDNA internal transcribed spacer (ITS) regions of the isolates (Cornell Accession and corresponding GenBank Nos.: Bo005NY07, JF693908; Bo006NY07, JF693909; and Bo038NY07, JF693910) exhibited 100% nucleotide identity to B. oryzae isolates (GenBank Nos. GU222690-GU222693) collected from switchgrass in Mississippi (3). Pathogenicity of two of the sequenced isolates (Bo006NY07 and Bo038NY07) along with one other isolate (Bo116NY09 from 'Cave-in-Rock' in Cayuga County) was evaluated in the greenhouse. Six- to eight-week-old switchgrass plants were inoculated with conidial suspensions (40,000 conidia/ml) of B. oryzae. Inoculum or sterilized water was applied until runoff. There were three plants per treatment of each of 'Blackwell', 'Carthage', 'Cave-in-Rock', 'Kanlow', 'Shawnee', 'Shelter', and 'Sunburst'. After inoculum had dried, plants were placed in a mist chamber for 24 h and then returned to the greenhouse. Symptoms developed 2 to 4 days after inoculation for all cultivars. No symptoms developed on the control plants. Foliar lesions closely resembled those observed in the field. B. oryzae was consistently reisolated from symptomatic tissue collected from greenhouse experiments. B. oryzae was first reported as a pathogen of switchgrass in North Dakota (1) and more recently in Mississippi (3). To our knowledge, this is the first report of B. oryzae causing a leaf spot on switchgrass in New York. Observation of severe leaf spot in several field plots suggests that switchgrass populations should be screened for their reaction to regional isolates of B. oryzae prior to expanded production of switchgrass as a biofuel crop. References: (1) J. M. Krupinsky et al. Can. J. Plant Pathol. 26:371 2004. (2) R. A. Shoemaker. Can. J. Bot. 37:883, 1959. (3) M. Tomaso-Peterson and C. J. Balbalian. Plant Dis. 94:643 2010.

First Report of Anthracnose Caused by Colletotrichum navitas on Switchgrass in New York.

Switchgrass (Panicum virgatum L.) is a perennial grass with significant potential as a biofuel crop. From 2007 to 2010, foliar lesions were observed in new and mature stands of switchgrass in various locations in New York. Lesions were elliptical with purple margins and white necrotic centers, generally <3 cm long, ~1 mm wide, often coalesced, and containing black setae. Upon incubation, symptomatic leaf tissue developed acervuli with masses of salmon-colored spores. The fungus was identified as Colletotrichum nativas Crouch on the basis of typical cultural characteristics and conidial morphology (1). Conidia were one-celled, hyaline, fusiform, and generally falcate. Conidial length averaged 40 µm (22 to 47 µm) and width averaged 5 µm (4 to 7 µm). Compared with other graminicolous species of Colletotrichum, the conidia were larger and varied from straight to irregularly bent. Sequences of the rDNA internal transcribed spacer (ITS) regions of three isolates (Cornell accession and corresponding GenBank Nos.: Cn071NY08 (from a >20-year-old naturalized stand of switchgrass in Steuben County), JF437053; Cn080NY08 (from 'Pathfinder' in Chemung County), JF437054; and Cn101NY09 (from 'Blackwell' in Chemung County), JF437055) exhibited 100% nucleotide identity to the type isolate of C. nativas (GenBank No. GQ919068) collected from switchgrass selection 'Brooklyn' in New Jersey (1). Pathogenicity of the sequenced isolates along with seven other isolates (Cn105NY09 from 'Sunburst' in Tompkins County; Cn107NY09 from 'Trailblazer' in Tompkins County; Cn109NY09 from 'Forestburg' in Tompkins County; Cn111NY09 and Cn112NY09 from 'Shelter' in Tompkins County; and Cn122NY09 and Cn123NY09 from 'Cave-in-Rock' in Genesee County) was evaluated in greenhouse experiments. Seven- to eight-week-old switchgrass plants were inoculated with conidial suspensions (1 × 106 conidia/ml) of C. nativas. Inoculum or sterilized water was sprayed until runoff. Three plants of each of 'Cave-in-Rock' and 'Kanlow' were sprayed per treatment and the experiment was repeated for 3 of the 10 isolates. Inoculated plants were placed in a mist chamber for 48 h before they were returned to the greenhouse and observed for disease development, which occurred within 1 week of inoculation for both cultivars. No symptoms developed on the control plants. Foliar lesions closely resembled those observed in the field. C. nativas was consistently reisolated from symptomatic tissue collected from greenhouse experiments. Switchgrass anthracnose associated with C. graminicola sensu lata has been reported in many U.S. states (2). On the basis of molecular phylogenetics and distinguishing morphological characters, Crouch et al. erected C. navitas as a novel species distinct from C. graminicola sensu stricto, a taxon restricted to the corn anthracnose pathogen (1). C. nativas was first documented on switchgrass in New Jersey (1) and appears to be the same pathogen causing anthracnose of switchgrass in the adjoining state of Pennsylvania (1,3). To our knowledge, this is the first report of C. nativas causing anthracnose of switchgrass in New York. References: (1) J. A. Crouch et al. Mycol. Res. 113:1411, 2009. (2) D. F. Farr and A. Y. Rossman. Fungal Databases, Systematic Mycology and Microbiology Laboratory, ARS, USDA. Retrieved from http://nt.ars-grin.gov/fungaldatabases/ , May 5, 2011. (3) M. A. Sanderson et al. Agron. J. 100:510, 2008.