Genetic Dissection of Diverse Seed Coat Patterns in Cowpea through a Comprehensive GWAS Approach.

This study investigates the genetic determinants of seed coat color and pattern variations in cowpea (Vigna unguiculata), employing a genome-wide association approach. Analyzing a mapping panel of 296 cowpea varieties with 110,000 single nucleotide polymorphisms (SNPs), we focused on eight unique coat patterns: (1) Red and (2) Cream seed; (3) White and (4) Brown/Tan seed coat; (5) Pink, (6) Black, (7) Browneye and (8) Red/Brown Holstein. Across six GWAS models (GLM, SRM, MLM, MLMM, FarmCPU from GAPIT3, and TASSEL5), 13 significant SNP markers were identified and led to the discovery of 23 candidate genes. Among these, four specific genes may play a direct role in determining seed coat pigment. These findings lay a foundational basis for future breeding programs aimed at creating cowpea varieties aligned with consumer preferences and market requirements.

Pyrrolic Nitrogen Boosted H2 Generation from an Aqueous Solution of HCHO at Room Temperature by Metal-Free Carbon Catalysts.

Hydrogen production from organic hydrides represents a promising strategy for the development of safe and sustainable technologies for H2 storage and transportation. Nonetheless, the majority of existing procedures rely on noble metal catalysts and emit greenhouse gases such as CO2/CO. Herein, we demonstrated an alternative N-doped carbon (CN) catalyst for highly efficient and robust H2 production from an aqueous solution of formaldehyde (HCHO). Importantly, this process generated formic acid as a valuable byproduct instead of CO2/CO, enabling a clean H2 generation process with 100% atom economy. Mechanism investigations revealed that the pyrrolic N in the CN catalysts played a critical role in promoting H2 generation via enhancing the transformation of O2 to generate •OO- free radicals. Consequently, the optimized CN catalysts achieved a remarkable H2 generation rate of 13.6 mmol g-1 h-1 at 30 °C. This finding is anticipated to facilitate the development of liquid H2 storage and its large-scale utilization.

The size distribution of the agitated saline microbubbles for contrast transcranial Doppler generated using standard manual methods.

Agitated saline microbubbles (MBs) are a common contrast agent for determining right-to-left shunt (RLS) by the contrast transcranial Doppler (c-TCD). The size of the generated bubbles is not standardized in clinical practice. MBs were generated using the recommended manual method by reciprocating motion through two syringes. The bubble size distributions (BSD) were measured using the microscopic shadow imaging technique. The results show that the diameter of MBs is mainly distributed between 10 and 100 µm, the mean bubble size is between 21 and 34 µm, the Sauter mean diameter (D32) is primarily between 50 and 300 µm, and the standard deviation (SD) is between 6 and 17 µm in 80 experiments. It provides a more accurate basis for the recommended manual method instability. The high variance values of the BSD indicate that the manual method has low stability and repeatability. The results of this study can be useful for further improvement of the reliability of c-TCD in detecting RLS. RESEARCH HIGHLIGHTS: This study provided the first detailed descriptions of the MBs size distribution in a flowing contrast agent by the microscopic shadow imaging technique. It reveals significant differences in the bubble size of manual foaming during repeated manipulations for each individual and between individuals.

Efficient methane production from anaerobic co-digestion of poultry litter with wheat straw in sequencing batch reactor: Effects of carbon-to-nitrogen ratio, total solids, and hydraulic retention time.

This study performed co-digestion of poultry litter (PL) with wheat straw in the daily anaerobic sequencing batch reactor considering operation parameters of carbon-to-nitrogen ratio (C/N, 11.6 to 28.4), total solids (TS, 2.6 to 9.4%), and hydraulic retention time (HRT, 7.6 to 24.4d). The inoculum with a diverse microbial community structure included 2% of methanogens (Methanosaeta) was chosen. Experimental performance by central composite design showed continuous methane production with the highest biogas production rate (BPR) obtained at C/N = 20, TS = 6%, and HRT = 7.6d, being (1.18 ± 0.14 L/LR/d). A significant modified quadratic model (p < 0.0001) for predicting BPR was built (R2 = 0.9724). The operation parameters and process stability both affected the release of nitrogen, phosphorus, and magnesium in the effluent. The results provided new support for the novel reactor operations for efficient bioenergy production from PL and agricultural wastes.

Employing micro-aeration in anaerobic digestion of poultry litter and wheat straw: Batch kinetics and continuous performance.

In this study, different micro-aeration (MA) strategies for anaerobic digestion (AD) of poultry litter (PL) and wheat straw (WS) were examined. MA at different stages (pretreatment, middle, pretreatment plus middle, and daily) in batch AD of WS showed that daily MA had the highest increase (16.5 %) of the cumulative methane yield (CMY) compared to the control. Batch co-digestion (Co-AD) of WS and PL with daily MA obtained a furtherly improved (15.1 %) CMY of 225.44 N mL CH4/g vS added. The modified Gompertz model and Cone model were good in fitting the methane yield kinetics of MA engaged AD process (R2 greater than 0.99). Daily MA shortened the lag phase of Co-AD by 3.4 %. The sequencing batch reactor for the Co-AD of WS and PL showed an increased (21.5 %) daily methane yield when 0.5-h/d MA was employed. The results provided support for the application of micro-aeration in the AD of agricultural wastes.

Start-up of co-digestion of poultry litter and wheat straw in anaerobic sequencing batch reactor by gradually increasing organic loading rate: Methane production and microbial community analysis.

Anaerobic co-digestion (ACoD) of poultry litter (PL) and wheat straw (WS) in an anaerobic sequencing batch reactor (ASBR) for continuous bio-energy generation was started up for the first time by gradually increasing the organic loading rate (OLR). A steady-state was reached with a daily biogas production of (13.06 ± 0.21) L and methane content of (54.38 ± 0.53) %. The subsequent regular operation achieved a daily methane yield of (100.41-188.65) mL CH4/g VS added and a total chemical oxygen demand (tCOD) removal rate of (70.3-85.9) % in the effluent under different operating parameters. The overall microbial community became more uniform, and the dominant aceticlastic methanogen of Methanosaeta was enriched after the start-up. While the microbial community was largely stable in the overall structure since the regular operation. Therefore, the start-up of the ACoD of PL and WS was successful with stable and continuous methane production.

The IL-22 gene rs2227478 polymorphism significantly decreases the risk of colorectal cancer in a Han Chinese population.

To examine the role of IL-22 gene in colorectal cancer (CRC) susceptibility, we identified causative genetic polymorphisms in promoter region of IL-22 gene and explored the mechanism underlying their contribution to CRC development in a Chinese population of Hubei province. 13 target single nucleotide polymorphisms (SNPs) in IL-22 gene promoter were genotyped in 787 CRC patients (426 colon cancer and 361 rectal cancer) and 800 normal controls. The results demonstrated that the rs2227478 T > C polymorphism was significantly associated with the risk of colon cancer, rectal cancer and CRC, and the C allele was associated with a decreased cancer risk than the T allele. In CRC tissue samples, the subjects with CT+CC genotypes of rs2227478 had lower levels of IL-22 mRNA than the subjects with TT genotypes. Further functional analysis revealed that the transcription repressor Sp1 possessed a higher binding affinity to the C allele than the T allele. Collectively, the rs2227478 T > C is a functional genetic polymorphism that significantly reduces the CRC risk in a Han Chinese population.

Propranolol vs. steroids in the treatment of infantile hemangiomas: A meta-analysis.

Infantile hemangioma (IH) is a common disease, and drug therapy is the most common treatment method. Clinically, steroids have long been used as first-line drugs, but in recent years, some doctors have begun to use propranolol to treat infantile hemangiomas (IHs). The present study performed a meta-analysis to evaluate the clinical effects of propranolol in comparison with steroids in the treatment of infantile hemangiomas. A detailed review of the literature on PubMed, Cochrane Library, Embase and Web of Science was performed prior to March 31, 2020. All literatures were compared with the clinical effects of propranolol and steroids in the treatment of infantile hemangiomas. A total of two researchers independently screened the literature according to the selection criteria, extracted data and assessed the risk of bias for the included studies. Review Manager 5.3 was used to meta-analyze all the included studies. According to the selection criteria, nine articles were included in the present study. The meta-analysis revealed that the effective rate of propranolol was greater than that of steroids in treating infantile hemangiomas [odds ratio (OR), 3.96, 95% confidence interval (CI), 2.47-6.37; P<0.00001]. Additionally, propranolol had fewer complications than steroids (OR, 0.21; 95% CI, 0.12-0.36; P<0.00001). The recurrence rate of the two groups was not statistically different (OR, 1.83; 95% CI, 0.59-5.70; P=0.3) and the surgical resection rate of propranolol was lower than steroids (OR, 0.19; 95% CI, 0.08-0.46; P=0.0002). The present study demonstrated that propranolol is more effective than steroids for the treatment of IHs, and provides a theoretical basis for the clinical use of propranolol as an alternative to steroids.

First Report of Podosphaera xanthii Causing Powdery Mildew on Zinnia elegans in Taiwan.

Zinnia elegans L., known as common zinnia, is an annual flowering plant belonging to the Asteraceae family and native to North America. The plant has colorful flowers and is one of the popular ornamental bedding plants for gardening. In March 2020, powdery mildew symptoms were observed in a zinnia floral field with an incidence of >70% in Dacun Township, Changhua County, Taiwan. The symptoms were spotted on the stems, flower petals and leaves which appeared as irregular colonies and white patches on the surfaces. When disease progressed, most of the plant surfaces were covered by the white fungal colonies and became yellowish. Under microscopic examination, hyphal appressoria of the fungus were indistinct or slightly nipple-shaped. The conidiophores were unbranched, erect, straight, smooth to slightly rough, 75.0 to 200.0 × 10.0 to 15.0 µm (n=10), composed of a cylindrical, flexuous foot cell, 40.0 to 100.0 × 8.8 to 15.0 µm (n=10), and following 1 to 5 shorter cells. The conidia were ellipsoid to ovoid, 25.0 to 37.5 × 15.0 to 23.8 µm (n=60), with an average length-to-width ratio of 1.8 and contained fibrosin bodies. No chasmothecia were found. Three voucher specimens (TNM Nos. F0033680, F0033681, and F0033682) were deposited in the National Museum of Natural Science, Taichung City, Taiwan. To confirm the identification, the internal transcribed spacer (ITS) regions of the three specimens were amplified using primer pairs ITS1/PM6 and PM5/ITS4 (Shen et al. 2015) and sequenced from both ends. The resulting sequences were deposited in GenBank under Accession Nos. MT568609, MT568610, and MT568611. The sequences were identical to each other and shared a 100% identity with that of Podosphaera xanthii MUMH 338 on Z. elegans from Japan (Accession No. AB040355) (Ito and Takamatsu 2010) over a 475 bp alignment. Accordingly, the fungus was identified as P. xanthii (Castagne) U. Braun & Shishkoff (Braun and Cook 2012) based on its morphological and molecular characters. Pathogenicity was demonstrated through inoculation by gently pressing naturally infected leaves onto leaves of three healthy potted common zinnia that had been sprayed with 0.02% Tween 20. Additional three non-inoculated plants treated in the same way without inoculating the powdery mildew served as the controls. Powdery mildew colonies were observed on inoculated leaves after 10 days at room temperature, later the diseased leaves became yellowish and deteriorated. The morphological traits of the fungus on the inoculated leaves were similar to those of the first observed. In addition, the ITS sequence from a colony on the inoculated leaves was 100% identical to MT568609-MT568611, fulfilling the Koch's postulates. All the controls remained symptomless. Z. elegans is known to be a host for different species of powdery mildew in the genus Erysiphe, Golovinomyces, and Podosphaera (Farr and Rossman 2020). In Taiwan, powdery mildew has been briefly reported on zinnia without detailed descriptions (Hsieh 1983). This study confirmed P. xanthii as a causal agent of powdery mildew in Taiwan and the awareness of the disease may benefit the floral industry. To our knowledge, this is the first confirmed report of P. xanthii on Z. elegans in Taiwan.

Investigating the Thermal-Protective Performance of Fire-Retardant Fabrics Considering Garment Aperture Structures Exposed to Flames.

The application of fire-retardant fabrics is essential for providing thermal protective function of the garments. Appropriate clothing design are beneficial for preventing the wearers from skin burn injuries and heat strains simultaneously. The intention of this work was to investigate the effects of clothing ventilation designs on its thermal protective performance by bench-scale tests. Four boundary conditions were designed to simulate the garment aperture structures on fabric level. Tests of thermal shrinkage, mass loss and time-to-second-degree-burns were performed with and without air gap under three heat-flux levels for two kinds of inherently fire-retardant fabrics. The impacts of fabric type, heat-flux level, air gap and boundary condition were analyzed. The presence of a 6.4-mm air gap could improve thermal protective performance of the fabrics, however, the garment openings would decrease this positive effects. More severe thermal aging found for spaced test configuration indicated the importance of balancing the service life and thermal protective performance of the clothing. The findings of this study implied that the characteristics of fabric type, air gap, boundary condition, and their effects on fabric thermal aging should be considered during clothing ventilation designs, to balance the thermal protection and comfort of the protective gear.

Effects of non-surgical periodontal therapy on systemic inflammation and metabolic markers in patients undergoing haemodialysis and/or peritoneal dialysis: a systematic review and meta-analysis.

BACKGROUND: This systematic review aimed to investigate whether non-surgical periodontal therapy (NSPT) can reduce systemic inflammatory levels and improve metabolism in patients undergoing haemodialysis (HD) and/or peritoneal dialysis (PD). METHODS: Electronic databases (PubMed, EMBASE, CENTRAL, CNKI, and WFPD) were searched for randomized controlled trials (RCTs) performed through July 2019. The risk of bias within studies was assessed with the Cochrane Collaboration's risk assessment tool. The systemic inflammatory and metabolic outcomes included the highly sensitive C-reactive protein (hs-CRP), interleukin 6 (IL-6), tumour necrosis factor-a (TNF-a), the albumin (Alb), and lipid metabolite levels. Meta-analyses (MAs) were performed to calculate the overall effect size where appropriate. RESULTS: Five RCTs were included in this study. Compared with untreated periodontitis groups, the dialysis patients after NSPT significantly showed decreased hs-CRP levels at less than or equal to 2 months (standardized mean difference: - 1.53, 95% confidence interval - 2.95 to - 0.11). No significant difference was found in IL-6 and Alb levels following NSPT at either the 3- or 6- month follow-ups. No MAs could be performed on the TNF-a level and the lipid metabolic markers. CONCLUSIONS: NSPT can moderately reduce serum hs-CRP levels in HD and/or PD patients, but did not significantly change IL-6 or Alb levels. For TNF-a and lipid metabolism markers, no sufficient evidence supports that these levels are changed after NSPT. Additional scientific research is necessary to assess the effects of NSPT on systemic inflammation and metabolic parameters in dialysis patients.

In Vitro and in Planta Evaluation of Trichoderma asperellum TA as a Biocontrol Agent Against Phellinus noxius, the Cause of Brown Root Rot Disease of Trees.

Brown root rot (BRR), caused by the white rot fungus Phellinus noxius, is an epidemic disease of diverse broadleaved and coniferous tree species in many tropical and subtropical regions. Flooding and trenching control measures are difficult to implement, and chemical controls can have an adverse impact on ecosystems. Previous studies have provided in vitro evidence for the potential use of Trichoderma spp. for biocontrol of BRR. Here, we analyzed the in vitro antagonistic and mycoparasitic abilities of four Trichoderma spp. isolates against four P. noxius isolates in dual culture and Ficus microcarpa wood blocks. A convenient inoculation system based on root inoculation of a highly susceptible loquat (Eriobotrya japonica) with P. noxius-colonized wheat-oat grains was developed to examine the effect of Trichoderma treatment in planta. Preventive application of Trichoderma asperellum TA, the isolate showing high antagonistic activity in vitro, was effective in preventing and delaying the wilting of P. noxius-inoculated loquat cuttings in greenhouse trials. To understand the specific niche in which T. asperellum TA interacts with P. noxius, KOH-aniline blue fluorescence microscopy was used to investigate the colonization of loquat roots by P. noxius and/or T. asperellum TA. Dilution plating assays were also conducted to quantify Trichoderma populations in the rhizosphere and potting mix. T. asperellum TA was able to robustly establish in the rhizosphere and potting mix but with scarce root penetration limited to the superficial layer. We discuss the timing and strategy for applying antagonistic Trichodema sp. on living trees or in BRR-infested areas for BRR management.

Conformation Search Across Multiple-Level Potential-Energy Surfaces (CSAMP): A Strategy for Accurate Prediction of Protein-Ligand Binding Structures.

Accurate protein binding structure determination presents a great challenge to both experiment and theory. Here, in this work, we propose a new DOX protocol which combines the ensemble molecular Docking as the coarse-level, structure Optimization with the semiempirical quantum mechanics methods as the medium level, and the eXtended ONIOM ( XO) calculations as the fine level. The fundamental of the DOX protocol relies on the Conformation Search Across Multiple-level Potential-energy surfaces (CSAMP) strategy, where the conformation spaces of a funnel-like structure are searched from the coarse level with hundreds of candidates to the medium level with around 10 top candidates to the fine level with the final top 1 or 2 binding modes. An in-depth test for the protocol set up against 28 crystallographic data consisting of HMGR-statins, SDase-inhibitors, 3HNRase-inhibitors, and NA-inhibitors yielded a satisfactory result with ∼0.5 Šroot-mean-square deviations (RMSDs) on geometries and ∼0.8 kcal/mol absolute error of relative binding energies on average. A further larger scale validation on the Astex test set (including 85 diverse structures) revealed an impressive performance with a RMSD < 2 Šsuccess rate of 99%, suggesting DOX is a promising computational route toward accurate prediction of the protein-ligand binding structures.

Electrochemical Umpolung of Bromide: Transition-Metal-Free Bromination of Indole C⁻H Bond.

A facile and sustainable electrochemical umpolung of bromide ion protocol was developed under mild reaction conditions. Transition metal catalysts and exogenous chemical oxidants were obviated for the bromination of C⁻H bond. Notably, graphite rod, which is commercially available at supermarkets and is inexpensive, was employed as the electrode material. This operationally easy and environmentally friendly approach accomplished the synthesis of 3-bromoindole in excellent yield and regioselectivity.

Self-Assembly and Applications of Amphiphilic Hybrid POSS Copolymers.

Understanding the mechanism of molecular self-assembly to form well-organized nanostructures is essential in the field of supramolecular chemistry. Particularly, amphiphilic copolymers incorporated with polyhedral oligomeric silsesquioxanes (POSSs) have been one of the most promising materials in material science, engineering, and biomedical fields. In this review, new ideas and research works which have been carried out over the last several years in this relatively new area with a main focus on their mechanism in self-assembly and applications are discussed. In addition, insights into the unique role of POSSs in synthesis, microphase separation, and confined size were encompassed. Finally, perspectives and challenges related to the further advancement of POSS-based amphiphilics are discussed, followed by the proposed design considerations to address the challenges that we may face in the future.