Stimulation of primed carbon under climate change corresponds with phosphorus mineralization in the rhizosphere of soybean.

Elevated CO2 and temperature likely alter photosynthetic carbon inputs to soils, which may stimulate soil microbial activity to accelerate the decomposition of soil organic carbon (SOC), liberating more phosphorus (P) into the soil solution. However, this hypothesis on the association of SOC decomposition and P transformation in the plant rhizosphere requires robust soil biochemical evidence, which is critical to nutrient management for the mitigation of soil quality against climate change. This study investigated the microbial functional genes relevant to P mineralization together with priming processes of SOC in the rhizosphere of soybean grown under climate change. Soybean plants were grown under elevated CO2 (eCO2, 700 ppm) combined with warming (+ 2 °C above ambient temperature) in open-top chambers. Photosynthetic carbon flow in the plant-soil continuum was traced with 13CO2 labeling. The eCO2 plus warming treatment increased the primed carbon (C) by 43 % but decreased the NaHCO3-extratable organic P by 33 %. Furthermore, NaHCO3-Po was negatively correlated with phosphatase activity and microbial biomass C. Elevated CO2 increased the abundances of C degradation genes, such as abfA and ManB, and P mineralization genes, such as gcd, phoC and phnK. The results suggested that increased photosynthetic carbon inputs to the rhizosphere of plants under eCO2 plus warming stimulated the microbial population and metabolic functions of both SOC and organic P mineralization. There is a positive relationship between the rhizosphere priming effect and P mineralization. The response of microorganisms to plant-C flow is decisive for coupled C and P cycles, which are likely accelerated under climate change.

Soil microbial metabolism on carbon and nitrogen transformation links the crop-residue contribution to soil organic carbon.

The beneficial effect of crop residue amendment on soil organic carbon (SOC) stock and stability depends on the functional response of soil microbial communities. Here we synchronized microbial metagenomic analysis, nuclear magnetic resonance and plant-15N labeling technologies to gain understanding of how microbial metabolic processes affect SOC accumulation in responses to differences in N supply from residues. Residue amendment brought increases in the assemblage of genes involved in C-degradation profiles from labile to recalcitrant C compounds as well as N mineralization. The N mineralization genes were correlated with the C and N accumulation in the particulate and mineral-associated C pools, and plant-derived aliphatic forms of SOC. Thus, the combined C and N metabolic potential of the microbial community transforms residue into persistent organic compounds, thereby increasing C and N sequestration in stable SOC pools. This study emphasizes potential microbially mediated mechanisms by which residue N affects C sequestration in soils.

Plant phosphorus acquisition links to phosphorus transformation in the rhizospheres of soybean and rice grown under CO2 and temperature co-elevation.

Climate change is likely to influence the reservoir of soil phosphorus (P) as plants adaptably respond to climate change in the perspective of P acquisition capability via root proliferation and mediating biochemical properties in the rhizosphere to access various soil P fractions. It is particularly important in cropping soils where P fertilizer plus soil P is required to synchronize crop P demand for the production sustainability under climate change. However, few studies have examined the effect of CO2 and temperature co-elevation on plant P acquisition, P fractions and relevant functional genes in the rhizosphere of different crops. Thus, the present study investigated the effect of elevated CO2 and warming on P uptake of soybean and rice grown in Mollisols, and soil P fractions and relevant biochemical properties and microbial functions in the rhizosphere with or without P application. Open-top chambers were used to achieve elevated CO2 of 700 ppm combined with warming (+ 2 °C above ambient temperature). CO2 and temperature co-elevation increased P uptake in soybean by 23% and 28% under the no-P and P application treatments, respectively; and in rice, by 34% and 13%, respectively. CO2 and temperature co-elevation depleted organic P in the rhizosphere of soybean, but increased in the rhizosphere of rice. The phosphatase activity negatively correlated with organic P in the highland soil while positively in the paddy soil. The P mineralization likely occurs in soybean-grown soils under climate change, while the P immobilization in paddy soils. CO2 and temperature co-elevation increased the copy numbers of P functional genes including phoD, phoC, pstS and phnX, in soils with P application. These results indicate that the P application would be requested to satisfy the increased P demand in soybean under climate change, but not in rice in paddy soils where soil P availability is sufficient. Therefore, elevated CO2 and temperature facilitated the crop P uptake via biochemical and microbial pathways, and P functional genes played an essential role in the conversion of P.

Elevated atmospheric CO2 alters the microbial community composition and metabolic potential to mineralize organic phosphorus in the rhizosphere of wheat.

BACKGROUND: Understanding how elevated atmospheric CO2 (eCO2) impacts on phosphorus (P) transformation in plant rhizosphere is critical for maintaining ecological sustainability in response to climate change, especially in agricultural systems where soil P availability is low. METHODS: This study used rhizoboxes to physically separate rhizosphere regions (plant root-soil interface) into 1.5-mm segments. Wheat plants were grown in rhizoboxes under eCO2 (800 ppm) and ambient CO2 (400 ppm) in two farming soils, Chromosol and Vertosol, supplemented with phytate (organic P). Photosynthetic carbon flow in the plant-soil continuum was traced with 13CO2 labeling. Amplicon sequencing was performed on the rhizosphere-associated microbial community in the root-growth zone, and 1.5 mm and 3 mm away from the root. RESULTS: Elevated CO2 accelerated the mineralization of phytate in the rhizosphere zones, which corresponded with increases in plant-derived 13C enrichment and the relative abundances of discreet phylogenetic clades containing Bacteroidetes and Gemmatimonadetes in the bacterial community, and Funneliformis affiliated to arbuscular mycorrhizas in the fungal community. Although the amplicon sequence variants (ASVs) associated the stimulation of phytate mineralization under eCO2 differed between the two soils, these ASVs belonged to the same phyla associated with phytase and phosphatase production. The symbiotic mycorrhizas in the rhizosphere of wheat under eCO2 benefited from increased plant C supply and increased P access from soil. Further supportive evidence was the eCO2-induced increase in the genetic pool expressing the pentose phosphate pathway, which is the central pathway for biosynthesis of RNA/DNA precursors. CONCLUSIONS: The results suggested that an increased belowground carbon flow under eCO2 stimulated bacterial growth, changing community composition in favor of phylotypes capable of degrading aromatic P compounds. It is proposed that energy investments by bacteria into anabolic processes increase under eCO2 to level microbial P-use efficiencies and that synergies with symbiotic mycorrhizas further enhance the competition for and mineralization of organic P. Video Abstract.

13C-DNA-SIP Distinguishes the Prokaryotic Community That Metabolizes Soybean Residues Produced Under Different CO2 Concentrations.

The amendment of crop residues produced under elevated CO2 (eCO2) may alter soil microbial community structure and their functions on residue decomposition and carbon (C) cycling in soil. The key to understanding this process is to elucidate the structure of prokaryotic communities that metabolize crop residues derived from eCO2. A soil incubation experiment was conducted to explore the response of soil microbial community to the amendment of 13C-labeled soybean residues produced under ambient CO2 (aCO2) and eCO2 . The residues were applied to a Mollisol, followed by 13C-DNA stable isotope probing (SIP) and Illumina sequencing on soil prokaryotic community over time. The structure of residue-metabolizing community differed in response to the amendment of eCO2- and aCO2-derived residues after 28 days of incubation. In particular, genera Actinomadura, Nocardia, Non-omuraea, and Shimazuella were the dominant members of the residue-metabolizing bacteria, which contributed to this difference. The relative abundances of genera Actinomadura, Nocardia and Shimazuella were 118-144%, 71-113%, and 2-4-fold higher in the Mollisol amended with aCO2-derived than eCO2-derived residue. In contrast, the relative abundance of Non-omuraea was 87-90% greater in the eCO2-residue treatment. However, during the incubation period, there was no difference between the two residue treatments in the community structure as a whole without SIP. These results implied that a pioneering prokaryotic community metabolized the residue initially prior to the entire community. Those bacteria genera being inhibited with the amendment of the eCO2-derived residue, compared to aCO2-derived residue, were likely preferential to metabolize recalcitrant C, which might be associated with changes of chemical composition of the residue under eCO2.

Impact of elevated CO2 on C:N:P ratio among soybean cultivars.

Elevated atmospheric CO2 concentration (eCO2) exerts significant influence on nutrient requirement in plant. The investigation of C:N:P ratios in major cropping soils is important for managing nutrient balance and maximizing their use efficiency in future farming systems. This study aimed to examine the effect of eCO2 on the C:N:P ratios in different plant parts among soybean cultivars. Twenty-four soybean cultivars were planted in open top chambers at two CO2 concentrations (390 and 550 ppm) and sampled at the initial pod filling stage (R5) and the full maturity stage (R8). The C, N and P concentrations in root, stem, leaf and seed were determined. Elevated CO2 decreased the N concentrations in stem (-5.1%) and leaf (-3.2%) at R5, and in root (-24%), stem (-25%) and seed (-6.2%) at R8, resulting in a significant decrease of C:N ratio in the corresponding parts. The P concentration was significantly increased in root (6.0%), stem (7.9%) and leaf (16%) at R5, and in root (2.6%), stem (29%) and seed (16%) at R8 across 24 cultivars, leading to a decrease in the C:P ratio. Elevated CO2 significantly decreased the N:P ratio in root (-4.5%), stem (-12%) and leaf (-17%) at R5, and in root (-26%), stem (-57%) and seed (-22%) at R8. Furthermore, the response of C:N:P ratios to eCO2 varied greatly among soybean cultivars leading to significant CO2 × cultivar interactions. Nitrogen, but not P was the limiting factor for the soybean plants grown in Mollisols under eCO2. The considerable variation in the C:N:P ratios among cultivars in response to eCO2 indicates a potential improvement in soybean adaptability to climate change via selection new cultivars. Cultivars SN22 and ZH4 that did not considerably altered the C:N and C:P ratios in response to eCO2 are likely the optimal genomes in soybean breeding programs for eCO2 adaption.