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1.
Fish Shellfish Immunol ; 74: 401-409, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-29337249

RESUMO

Lactate dehydrogenase (LDH) is key for anaerobic glycolysis. LDH is induced by the hypoxia inducible factor -1 (HIF-1). HIF-1 induces genes involved in glucose metabolism and regulates cellular oxygen homeostasis. HIF-1 is formed by a regulatory α-subunit (HIF-1α) and a constitutive ß-subunit (HIF-1ß). The white spot syndrome virus (WSSV) induces anaerobic glycolysis in shrimp hemocytes, associated with lactate accumulation. Although infection and lactate production are associated, the LDH role in WSSV-infected shrimp has not been examined. In this work, the effects of HIF-1 silencing on the expression of two LDH subunits (LDHvan-1 and LDHvan-2) in shrimp infected with the WSSV were studied. HIF-1α transcripts increased in gills, hepatopancreas, and muscle after WSSV infection, while HIF-1ß remained constitutively expressed. The expression for both LDH subunits increased in each tissue evaluated during the WSSV infection, translating into increased enzyme activity. Glucose concentration increased in each tissue evaluated, while lactate increased in gills and hepatopancreas, but not in muscle. Silencing of HIF-1α blocked the increase of LDH expression and enzyme activity, along with glucose (all tissues) and lactate (gills and hepatopancreas) concentrations produced by WSSV infection. These results demonstrate that HIF-1 up regulates the expression of LDH subunits during WSSV infection, and that this induction contributes to substrate metabolism in energetically active tissues of infected shrimp.


Assuntos
Regulação da Expressão Gênica/imunologia , Fator 1 Induzível por Hipóxia/genética , Imunidade Inata/genética , L-Lactato Desidrogenase/genética , L-Lactato Desidrogenase/imunologia , Penaeidae/genética , Penaeidae/imunologia , Sequência de Aminoácidos , Animais , Proteínas de Artrópodes/química , Proteínas de Artrópodes/genética , Proteínas de Artrópodes/imunologia , Sequência de Bases , Perfilação da Expressão Gênica , Fator 1 Induzível por Hipóxia/metabolismo , L-Lactato Desidrogenase/química , Filogenia , Alinhamento de Sequência , Vírus da Síndrome da Mancha Branca 1/fisiologia
2.
J Appl Microbiol ; 117(2): 347-57, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24848880

RESUMO

AIMS: Litopenaeus vannamei do not have an adaptive immune response system. White spot syndrome virus (WSSV) is the most severe pathogen in shrimps. Bacillus subtilis spores carrying heterologous antigens on its surface have been evaluated as a vaccine inducing specific systemic responses on vertebrates. Orally administrated Vp28 vaccines have been investigated in crustaceans. Vp26 is also an important constituent of WSSV structure but little is known about its oral vaccination capacity in L. vannamei. METHODS AND RESULTS: In this study, for first time, L. vannamei WSSV protection was carried out using B. subtilis recombinant spores (RS), displaying CotC::Vp26 fusion protein (FP) on its surface. RS-expressing FP were coated on shrimp food pellets and used to feed L. vannamei. Results have shown that orally administered B. subtilis RS protected 100% L. vannamei against WSSV infection. CONCLUSIONS: Bacillus subtilis spores orally administrated expressing CotC::Vp26 fusion protein on its surface demonstrated the great capacity of Vp26 to induce immune protection, equally or even greater than Vp28 in L. vannamei. SIGNIFICANCE AND IMPACT OF THE STUDY: The biotechnological process developed represents an easy to produce, practical to handle, environmentally stable, human-safe and economically feasible opportunity to apply a new Vp26 vaccine in a massively way in shrimp farms.


Assuntos
Bacillus subtilis/genética , Penaeidae/virologia , Proteínas do Envelope Viral/imunologia , Vacinas Virais , Vírus da Síndrome da Mancha Branca 1/imunologia , Administração Oral , Animais , Proteínas de Bactérias/genética , Penaeidae/imunologia , Proteínas Recombinantes de Fusão/análise , Proteínas Recombinantes de Fusão/imunologia , Esporos Bacterianos/genética , Vacinação/veterinária , Proteínas do Envelope Viral/genética , Vacinas Virais/genética
3.
Genet Mol Res ; 11(4): 4081-92, 2012 Nov 28.
Artigo em Inglês | MEDLINE | ID: mdl-23079970

RESUMO

Ethylene induces characteristic ripening reactions in climacteric fruits through its binding to histidine-kinase (HK) receptors, activating the expression of ripening genes. Ethylene receptors have been found in Arabidopsis thaliana (Brassicaceae) and some fruits; number and expression patterns differ among species. In mango, only ethylene receptor ETR1 was known. We cloned ERS1 cDNA from mango, and evaluated the expression of Mi-ERS1 and Mi-ETR1 by qPCR in developmental and ripening stages of this fruit. The Mi-ERS1 coding sequence is 1890 bp long and encodes 629 amino acids, similar to ERS1 from other fruits. Also, the amino acid sequence of ERS1 C-terminal HK domain shows the cognate fold after molecular modeling. Mi-ERS1 expression levels increased as mangoes ripened, showing the highest levels at the climacteric stage, while Mi-ETR1 levels did not change during development and ripening. We conclude that the patterns of expression of Mi-ERS1 and Mi-ETR1 differ in mango fruit.


Assuntos
Regulação da Expressão Gênica no Desenvolvimento , Regulação da Expressão Gênica de Plantas , Mangifera/crescimento & desenvolvimento , Mangifera/genética , Proteínas de Plantas/genética , Receptores de Superfície Celular/genética , Sequência de Aminoácidos , Sequência de Bases , Dióxido de Carbono/metabolismo , Clonagem Molecular , DNA Complementar/genética , Frutas/genética , Frutas/crescimento & desenvolvimento , Modelos Moleculares , Dados de Sequência Molecular , Proteínas de Plantas/química , Proteínas de Plantas/metabolismo , Estrutura Terciária de Proteína , Receptores de Superfície Celular/química , Receptores de Superfície Celular/metabolismo , Alinhamento de Sequência
4.
Prikl Biokhim Mikrobiol ; 48(5): 494-500, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-23101386

RESUMO

Phosphoketolases are key enzymes of the phosphoketolase pathway of heterofermentative lactic acid bacteria, which include lactobacilli. In heterofermentative lactobacilli xylulose 5-phosphate phosphoketolase (X5PPK) is the main enzyme of the phosphoketolase pathway. However, activity of fructose 6-phosphate phosphoketolase (F6PPK) has always been considered absent in lactic acid bacteria. In this study, the F6PPK activity was detected in 24 porcine wild-type strains of Lactobacillus reuteri and Lactobacillus mucosae, but not in the Lactobacillus salivarius or in L. reuteri ATCC strains. The activity of F6PPK increased after treatment of the culture at low-pH and diminished after porcine bile-salts stress conditions in wild-type strains of L. reuteri. Colorimetric quantification at 505 nm allowed to differentiate between microbial strains with low activity and without the activity of F6PPK. Additionally, activity of F6PPK and the X5PPK gene expression levels were evaluated by real time PCR, under stress and nonstress conditions, in 3 L. reuteri strains. Although an exact correlation, between enzyme activity and gene expression was not obtained, it remains possible that the xpk gene codes for a phosphoketolase with dual substrate, at least in the analyzed strains of L. reuteri.


Assuntos
Aldeído Liases/metabolismo , Intestinos/microbiologia , Lactobacillus/enzimologia , Aldeído Liases/genética , Animais , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Regulação Bacteriana da Expressão Gênica , Lactobacillus/isolamento & purificação , Limosilactobacillus reuteri/enzimologia , Limosilactobacillus reuteri/isolamento & purificação , Estresse Fisiológico , Suínos
5.
Insect Biochem Mol Biol ; 32(11): 1533-41, 2002 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-12530221

RESUMO

The biosynthesis of Rhodnius prolixus heme-binding protein (RHBP), which is present in the hemolymph and oocytes of Rhodnius prolixus, was investigated. Fat bodies of female insects incubated in vitro with 14C-leucine were able to synthesize and secrete 14C-RHBP to the culture medium. Titrtion of synthesized RHBP with hemin showed that the protein secreted by the fat bodies is bound to heme, despite the presence of apo-RHBP in the hemolymph. The sequence of the RHBP cDNA encodes a pre-protein of 128 amino acids with no significant homology to any known protein. Northern-blot assays revealed that RHBP expression was limited to fat bodies. The levels of both RHBP mRNA and secreted protein increased in response to blood meal. In addition, the time-course of RHBP secretion in vitro paralleled mRNA accumulation observed in vivo. The inhibition of the de novo heme biosynthesis by treatment of fat bodies with succinyl acetone (SA), an irreversible inhibitor of delta-aminolevulinic acid-dehydratase, led to a significant decrease of heme-RHBP secretion. Nevertheless, the levels of RHBP mRNA were not modified by SA treatment, suggesting that the heme availability is involved in a post-transcriptional control of the RHBP synthesis.


Assuntos
Proteínas de Transporte/biossíntese , Hemeproteínas/biossíntese , Proteínas de Insetos/biossíntese , Rhodnius/metabolismo , Sequência de Aminoácidos , Animais , Sequência de Bases , Proteínas de Transporte/química , Proteínas de Transporte/genética , Clonagem Molecular , Primers do DNA , DNA Complementar/genética , Feminino , Regulação da Expressão Gênica/fisiologia , Heme/antagonistas & inibidores , Heme/metabolismo , Proteínas Ligantes de Grupo Heme , Hemeproteínas/química , Hemeproteínas/genética , Hemolinfa/metabolismo , Proteínas de Insetos/química , Proteínas de Insetos/genética , Dados de Sequência Molecular , Oócitos/metabolismo , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/química , Rhodnius/genética
6.
J Am Coll Nutr ; 20(6): 649-55, 2001 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11771682

RESUMO

OBJECTIVE: The aim of this study was to determine the effect of dietary fiber consumption and lifestyle on serum lipids in adult men with non-restricted diet and physical activity. METHODS: Two groups of 19 men were classified as high (48 g/day) and low fiber groups (27 g/day). Anthropometry, food frequency, daily weighed intakes and physical activity were done for a seven-day period. Fasting blood was collected and serum was analyzed for triglycerides, total cholesterol and lipoprotein cholesterol fractions. RESULTS: Crude correlation coefficients showed that total cholesterol was negatively associated with physical activity, total dietary fiber and P/S ratio (r = 0.52; p < 0.001. r = -0.44; p < 0.01, r = 0.51, p < 0.001). LDL-C was also correlated negatively with total dietary fiber and P/S ratio (r = -0.34, p < 0.03; r = -0.53, p < 0.01). It was also positively associated with dietary cholesterol and body weight (r = 0.34, p < 0.03; r = 0.31, p < 0.05). Serum triglycerides had an inverse association with total dietary fiber and physical activity (r = -0.30: p < 0.05; r = -0.45, p < 0.004). After controlling for energy intake, total fat, saturated fat, dietary cholesterol, physical activity and body mass index, LDL-C/HDL-C, and TC/HDL-C, remained significantly associated with dietary fiber (r = 0.34; p < 0.05 and r = -0.38; p < 0.02, respectively). CONCLUSIONS: This study provides evidence in free living men that there is an association between dietary fiber intake and favorable lipid status and that lifestyle defined by socioeconomic status, physical activity and the quality of the dietary fat intake can play an important role. Public health nutrition advice and policy should continue to emphasize the importance of these factors.


Assuntos
Fibras na Dieta , Estilo de Vida , Lipídeos/sangue , Adulto , Colesterol/sangue , Registros de Dieta , Comportamento Alimentar/fisiologia , Humanos , Masculino , México , Triglicerídeos/sangue
7.
Eur J Biochem ; 261(1): 285-90, 1999 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-10103061

RESUMO

A new type of insect lipoprotein was isolated from the hemolymph of the female cochineal insect Dactylopius confusus. The lipoprotein from the cochineal insect hemolymph was found to have a relative molecular mass of 450 000. It contains 48% lipid, mostly diacylglycerol, phospholipids and hydrocarbons. The protein moiety of the lipoprotein consists of two apoproteins of approximately 25 and 22 kDa, both of which are glycosylated. Both apolipoproteins are also found free in the hemolymph, unassociated with any lipid. Purified cochineal apolipoproteins can combine with Manduca sexta lipophorin, if injected together with adipokinetic hormone into M. sexta. This could indicate that the cochineal lipoprotein can function as a lipid shuttle similar to lipophorins of other insects, and that the cochineal insect apolipoproteins have an overall structure similar to insect apolipophorin-III.


Assuntos
Hemolinfa/química , Proteínas de Insetos/química , Insetos/química , Lipoproteínas/química , Sequência de Aminoácidos , Animais , Apolipoproteínas/química , Apolipoproteínas/genética , Apolipoproteínas/metabolismo , Transporte Biológico Ativo , Proteínas de Transporte/metabolismo , Feminino , Hemolinfa/metabolismo , Proteínas de Insetos/genética , Proteínas de Insetos/metabolismo , Insetos/genética , Insetos/metabolismo , Metabolismo dos Lipídeos , Lipoproteínas/genética , Lipoproteínas/metabolismo , Manduca , Dados de Sequência Molecular , Peso Molecular
8.
Comp Biochem Physiol B Biochem Mol Biol ; 121(3): 309-14, 1998 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-9972303

RESUMO

A high density lipoprotein (HDL) and beta-glucan binding protein (BGBP) have been found in the hemolymph of marine shrimp. These proteins are involved in the transport of lipid and the recognition of foreign matter, respectively. Similarities in the color of the proteins and the molecular mass were noted. For a detailed comparison, HDL and BGBP were purified from two shrimp species, Penaeus vannamei and Penaeus californiensis, and their biochemical characteristics determined. Both proteins from each of the shrimp species are monomeric with approximately the same molecular mass in sodium dodecyl sulfate-polyacrylamide gel electrophoresis (approximately 100-112 kDa) and contain carbohydrate and lipid. The amino acid composition is similar and there is a high degree of similarity in the N-terminus. Furthermore, they are recognized by antibodies prepared independently. These results reveal that BGBP and HDL in shrimp hemolymph are the same protein, suggesting that there is a close relationship between the ability to respond to foreign matter and the diet as a provider of essential nutrients.


Assuntos
Proteínas de Transporte/química , Decápodes/química , Lipoproteínas LDL/química , Sequência de Aminoácidos , Animais , Carboidratos/análise , Proteínas de Transporte/genética , Proteínas de Transporte/isolamento & purificação , Decápodes/genética , Hemolinfa/química , Imunoquímica , Lectinas , Lipídeos/análise , Lipoproteínas LDL/genética , Lipoproteínas LDL/isolamento & purificação , Dados de Sequência Molecular , Peso Molecular , Homologia de Sequência de Aminoácidos , Especificidade da Espécie
9.
Artigo em Inglês | MEDLINE | ID: mdl-9149399

RESUMO

A beta-glucan binding protein (BGBP) was identified in both white (Penaeus vannamei) and blue shrimp (P. stylirostris) plasma. White shrimp BGBP was purified by affinity chromatography using immobilized laminarin, and its molecular and biological properties were described. White shrimp BGBP is a monomeric protein with a molecular mass of 100 kDa, similar to those described for other crustacean BGBPs. White and blue shrimp BGBPs can be detected with antisera against crayfish BGBP and brown shrimp BGBP. Both amino acid composition and N-terminal sequence are markedly similar to brown shrimp (P. californiensis) and crayfish (Pacifastacus leniusculus) BGBP, indicating that this recognition protein is present in freshwater and marine crustaceans.


Assuntos
Proteínas de Transporte/imunologia , Proteínas de Transporte/isolamento & purificação , Penaeidae/química , Aglutininas/metabolismo , Sequência de Aminoácidos , Aminoácidos/análise , Animais , Astacoidea , Proteínas de Transporte/metabolismo , Cromatografia Líquida/métodos , Concanavalina A/metabolismo , Eletroforese em Gel de Poliacrilamida/métodos , Glucanos , Glicosilação , Lectinas , Camundongos , Dados de Sequência Molecular , Peso Molecular , Polissacarídeos , Homologia de Sequência de Aminoácidos
10.
Arch Insect Biochem Physiol ; 31(1): 39-51, 1996.
Artigo em Inglês | MEDLINE | ID: mdl-8541570

RESUMO

Lipid transfer particle (LTP) is present in hemolymph of the tobacco hornworm Manduca sexta. Biosynthesis of LTP, occurrence in hemolymph, and the role of LTP-apoproteins in the lipid transfer reaction were investigated using antibodies specific for LTP or for each of the apoproteins. In vitro protein synthesis followed by immunoprecipitation demonstrated that LTP is synthesized by the fat body and secreted into the medium. In contrast to apolipophorin III, an exchangeable apoprotein of lipophorin (the major lipid transport protein in hemolymph), apoLTP-III could not be detected free in hemolymph. LTP concentrations in the hemolymph were measured by a sandwich ELISA using a mouse monoclonal antibody against apoLTP-III as capturing antibody and rabbit polyclonal antibody against apoLTP-I as detecting antibody. LTP concentration increased during the late fifth instar larval stage, followed by a decrease in the wandering stage. Subsequently, LTP concentrations were strongly increased in hemolymph of adult moths. The role of the three apoproteins of LTP in the lipid transfer reaction was analyzed using apoprotein-specific antibodies. All three, apoLTP-I, -II, and -III, appeared to be important for lipid transfer activity, as shown by inhibition of lipid transfer by antibodies specific for each of the three apoproteins.


Assuntos
Proteínas de Transporte/biossíntese , Corpo Adiposo/metabolismo , Manduca/metabolismo , Animais , Apoproteínas/metabolismo , Proteínas de Transporte/sangue , Hemolinfa/metabolismo , Camundongos , Coelhos
11.
Life Sci ; 59(23): 1951-60, 1996.
Artigo em Inglês | MEDLINE | ID: mdl-8950294

RESUMO

Gliadin-protein interaction and its relationship to the pathogenesis hypotheses of celiac disease was investigated. Wheat germ agglutinin was not immunodetected in gliadin preparations. Peptic-tryptic gliadin digest was used to study the gliadin-protein interactions by crossed immunoelectrophoresis and affinity blotting. Biotinylated gliadin digest interacted with IgG and bovine serum albumin but not with several glycoproteins. Since albumin and IgG light chains are not glycosylated, this interaction is not lectin-like, neither completely immunological because of recognition of the IgG Fc fraction. Immobilized and boiled IgG was not recognized by gliadin digest as a lectin. Gliadin digest fractions from T-gel chromatography reduced the fluorescence intensity of cis-parinaric acid bound to albumin. The gliadin-protein interaction is not lectin-like or completely immunological but hydrophobic. Hydrophobicity of gliadins may contribute to the pathogenic events that result in celiac disease.


Assuntos
Doença Celíaca/metabolismo , Gliadina/metabolismo , Lectinas/metabolismo , Cromatografia em Gel , Eletroforese em Gel de Poliacrilamida , Humanos , Hidrólise , Ligação Proteica , Aglutininas do Germe de Trigo/metabolismo
12.
Arch Insect Biochem Physiol ; 31(3): 273-87, 1996.
Artigo em Inglês | MEDLINE | ID: mdl-8742825

RESUMO

A female specific protein was isolated from eggs and female hemolymph of cochineal insects, using density gradient ultracentrifugation, ammonium sulfate precipitation, and size exclusion column chromatography. The protein was found to consist of four different subunits with apparent molecular weights (Mr) 45,000, 49,000, 53,000, and 56,000, respectively. All four subunits were found to be glycosylated; no association of lipids was detected. Size exclusion column chromatography and non-denaturing polyacrylamide gel electrophoresis demonstrated that the native yolk protein exists as large polymers. Electron microscopy showed that these molecules are long, helical ribbons of variable size which are found in both hemolymph and eggs. Using cryo-electron microscopy, it was shown that the ribbons were 14.6 +/- 1.5 nm wide; the helix they form has a repeat distance of 104.9 +/- 11.3 nm and a diameter of 42.1 +/- 5 nm. A clear substructure of the ribbons was recognized. The newly identified protein is the major yolk protein of Dactylopius confusus and no other proteins resembling the more familiar vitellins of other insect species were detected. Moreover, the D. confusus yolk protein appears to be unique both in its subunit structure and in its polymerizing qualities. Thus, the cochineal yolk protein (CYP) is suggested to represent a new type of insect yolk protein.


Assuntos
Proteínas do Ovo/química , Insetos/química , Sequência de Aminoácidos , Animais , Proteínas do Ovo/isolamento & purificação , Proteínas do Ovo/ultraestrutura , Feminino , Masculino , Microscopia Eletrônica , Dados de Sequência Molecular , Coloração Negativa , Coelhos
13.
J Biol Chem ; 268(4): 2337-40, 1993 Feb 05.
Artigo em Inglês | MEDLINE | ID: mdl-8428907

RESUMO

An ommochrome-binding protein (OBP) from the hemolymph of Manduca sexta has recently been purified and characterized. A cDNA clone was isolated from a fifth instar larval cDNA expression library utilizing antiserum against OBP. Northern blot analysis of total fat body RNA detected a transcript of approximately 1.2 kilobases in fifth instar wandering larvae RNA. The complete nucleotide sequence of the 905-base pair cDNA insert was determined by the dideoxy chain termination method. The OBP cDNA encodes a polypeptide of 274 residues with a predicted molecular weight of 30,580 and with one consensus N-linked glycosylation site. Comparison of the NH2-terminal sequence of the mature protein and the cDNA sequence revealed a typical signal peptide of 18 amino acids. In wandering stage larvae, the OBP transcript appeared to be at least 250-fold less abundant than ribosomal RNA.


Assuntos
Proteínas de Transporte/genética , Genes de Insetos , Hormônios de Inseto/genética , Proteínas de Insetos , Mariposas/genética , Sequência de Aminoácidos , Animais , Sequência de Bases , Clonagem Molecular , DNA/genética , Expressão Gênica , Hemolinfa/química , Dados de Sequência Molecular , Fenotiazinas/metabolismo , RNA Mensageiro/genética , Mapeamento por Restrição
15.
Mol Gen Genet ; 228(1-2): 183-92, 1991 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-1909420

RESUMO

A novel ribosomal protein operon in the Euglena gracilis chloroplast genome was characterized. It encodes the genes for ribosomal proteins S4 and S11 (rps4 and rps11). The coding region of the rps11 gene is interrupted by two introns of 107 and 100 bp. The introns belong to a distinct class known as group III introns. The major transcript from this operon was characterized as a fully spliced dicistronic rps4-rps11 mRNA by RNA blot analysis, primer extension sequencing, and cDNA cloning and sequencing. An additional 95 nucleotide (nt) group III intron was identified in the 123 nt rps4-rps11 intercistronic region. The identification of the intercistronic intron between the rps4 and rps11 genes was unexpected. Other RNA transcripts from regions of the genome that could potentially contain intercistronic introns were re-examined and two other intercistronic, group III introns were found. These are located in a large ribosomal protein operon between the genes for the ribosomal proteins L23 and L2, and between L14 and L5. There are at least 50 group III introns in the E. gracilis chloroplast genome. All but 6 are found in genes encoding protein components of the transcriptional and translational apparatus. The distribution of group III introns and the unusual location of intercistronic group III introns may reflect some aspect of gene expression, or provide some insight into the mechanism of their splicing.


Assuntos
Cloroplastos , Euglena gracilis/genética , Íntrons/genética , Óperon de RNAr/genética , Sequência de Aminoácidos , Animais , Sequência de Bases , Northern Blotting , Clonagem Molecular , Herança Extracromossômica , Dados de Sequência Molecular , Reação em Cadeia da Polimerase , Mapeamento por Restrição , Proteínas Ribossômicas/genética , Homologia de Sequência do Ácido Nucleico , Transcrição Gênica
16.
Nucleic Acids Res ; 18(7): 1869-78, 1990 Apr 11.
Artigo em Inglês | MEDLINE | ID: mdl-2110656

RESUMO

The rpoB gene coding for a beta-like subunit of the chloroplast DNA-dependent RNA polymerase has been located on the chloroplast genome of Euglena gracilis distal to the rrnC ribosomal RNA operon. We have determined 5760 base-pairs of DNA sequence, including 97 bp of the 5S rRNA gene, an intergenic spacer of 1264 bp, the rpoB gene of 4249 bp, 84 bp spacer and 67 bp of the rpoC1 gene. The rpoB gene is of the same polarity as the rRNA operons. The organization of the rpoB and rpoC genes resembles the E. coli rpoB-rpoC and higher plant chloroplast rpoB-rpoC1-rpoC2 operons. The Euglena rpoB gene (1082 codons) encodes a polypeptide with a predicted molecular weight of 124,288. The rpoB gene is interrupted by seven Group III introns of 93, 95, 94, 99, 101, 110 and 99 bp respectively and a Group II intron of 309 bp. All other known rpoB genes lack introns. All the exon-exon junctions were experimentally determined by cDNA cloning and sequencing or direct primer extension RNA sequencing. Transcripts from the rpoB locus were characterized by Northern hybridization. Fully-spliced, monocistronic rpoB mRNA, as well as rpoB-rpoC1 and rpoB1-rpoC1-rpoC2 mRNAs were identified.


Assuntos
Cloroplastos/enzimologia , RNA Polimerases Dirigidas por DNA/genética , Euglena gracilis/genética , Óperon , Transcrição Gênica , Sequência de Aminoácidos , Animais , Sequência de Bases , Clonagem Molecular , Escherichia coli/genética , Euglena gracilis/enzimologia , Genes , Substâncias Macromoleculares , Dados de Sequência Molecular , Sondas de Oligonucleotídeos , Plasmídeos , Mapeamento por Restrição , Homologia de Sequência do Ácido Nucleico
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