Transcriptome analysis reveals the key role of overdominant expression of photosynthetic and respiration-related genes in the formation of tobacco(Nicotiana tabacum L.) biomass heterosis.

BACKGROUND: Leaves are the nutritional and economic organs of tobacco, and their biomass directly affects tobacco yield and the economic benefits of farmers. In the early stage, our research found that tobacco hybrids have more leaves and larger leaf areas, but the performance and formation reasons of biomass heterosis are not yet clear. RESULTS: This study selected 5 parents with significant differences in tobacco biomass and paired them with hybrid varieties. It was found that tobacco hybrid varieties have a common biomass heterosis, and 45 days after transplantation is the key period for the formation of tobacco biomass heterosis; By analyzing the biomass heterosis of hybrids, Va116×GDH94 and its parents were selected for transcriptome analysis. 76.69% of the differentially expressed genes between Va116×GDH94 and its parents showed overdominant expression pattern, and these overdominant expression genes were significantly enriched in the biological processes of photosynthesis and TCA cycle; During the process of photosynthesis, the overdominant up-regulation of genes such as Lhc, Psa, and rbcl promotes the progress of photosynthesis, thereby increasing the accumulation of tobacco biomass; During the respiratory process, genes such as MDH, ACO, and OGDH are overedominantly down-regulated, inhibiting the TCA cycle and reducing substrate consumption in hybrid offspring; The photosynthetic characteristics of the hybrid and its parents were measured, and the net photosynthetic capacity of the hybrid was significantly higher than that of the parents. CONCLUSION: These results indicate that the overdominant expression effect of differentially expressed genes in Va116×GDH94 and its parents plays a crucial role in the formation of tobacco biomass heterosis. The overdominant expression of genes related to photosynthesis and respiration enhances the photosynthetic ability of Va116×GDH94, reduces respiratory consumption, promotes the increase of biomass, and exhibits obvious heterosis.

Overdominant expression of genes plays a key role in root growth of tobacco hybrids.

Heterosis has greatly improved the yield and quality of crops. However, previous studies often focused on improving the yield and quality of the shoot system, while research on the root system was neglected. We determined the root numbers of 12 F1 hybrids, all of which showed strong heterosis, indicating that tobacco F1 hybrids have general heterosis. To understand its molecular mechanism, we selected two hybrids with strong heterosis, GJ (G70 × Jiucaiping No.2) and KJ (K326 × Jiucaiping No.2), and their parents for transcriptome analysis. There were 84.22% and 90.25% of the differentially expressed genes were overdominantly expressed. The enrichment analysis of these overdominantly expressed genes showed that "Plant hormone signal transduction", "Phenylpropanoid biosynthesis", "MAPK signaling pathway - plant", and "Starch and sucrose metabolism" pathways were associated with root development. We focused on the analysis of the biosynthetic pathways of auxin(AUX), cytokinins(CTK), abscisic acid(ABA), ethylene(ET), and salicylic acid(SA), suggesting that overdominant expression of these hormone signaling pathway genes may enhance root development in hybrids. In addition, Nitab4.5_0011528g0020、Nitab4.5_0003282g0020、Nitab4.5_0004384g0070 may be the genes involved in root growth. Genome-wide comparative transcriptome analysis enhanced our understanding of the regulatory network of tobacco root development and provided new ideas for studying the molecular mechanisms of tobacco root development.

Integrated transcriptome and proteome analysis provides insights into the mechanism of cytoplasmic male sterility (CMS) in tobacco (Nicotiana tabacum L.).

Cytoplasmic male sterility (CMS) is critical in maximizing crop yield and quality by utilizing tobacco heterosis. However, the mechanism of tobacco CMS formation remains unknown. Using paraffin section observation, transcriptome sequencing, and TMT proteomic analysis, this study describes the differences in expression profiles in morphology, transcription, and translation between the sua-CMS tobacco line (MSYY87) and its corresponding maintainer line (YY87). According to the microspore morphology, MSYY87 began to exhibit abnormal microspore development during the early stages of germination and differentiation (androgynous primordium differentiation stage). According to transcriptomic and proteomic analyses, 17 genes/proteins involved in lipid transport/binding and phenylpropane metabolism were significantly down-regulated at both the mRNA and protein levels. Through further analysis, we identified some key genes that may be involved in tobacco male sterility, including ß-GLU related to energy metabolism, 4CL and bHLHs related to anther wall formation, nsLTPs related to pollen germination and anther cuticle, and bHLHs related to pollen tapetum degradation. We speculate that the down-regulation of these genes affects the normal physiological metabolism, making tobacco plants show male sterility. SIGNIFICANCE: Cytoplasmic male sterility (CMS) plays a vital role in utilizing tobacco heterosis and enhancing crop yield and quality. We observed paraffin sections and conducted transcriptome sequencing and mitochondrial proteomics to examine the tobacco CMS line Yunyan 87 (MSYY87) and its maintainer line Yunyan 87 (YY87). The down-regulation expression of ß-GLU resulted in insufficient ATP supply, which resulted in disordered energy metabolism. The down-regulation expression of 4CL, nsLTPs and bHLHs may affect the formation of anther wall and anther cuticle, pollen germination, as well as the degradation of pollen tapetum. These various abnormal physiological processes, the male sterility of tobacco is finally caused. The findings shed light on the molecular mechanisms of tobacco CMS and serve as a model for fertility research in other flowering plants.

Preparation and Study of a Simple Three-Matrix Solid Electrolyte Membrane in Air.

Solid-state lithium batteries have attracted much attention due to their special properties of high safety and high energy density. Among them, the polymer electrolyte membrane with high ionic conductivity and a wide electrochemical window is a key part to achieve stable cycling of solid-state batteries. However, the low ionic conductivity and the high interfacial resistance limit its practical application. This work deals with the preparation of a composite solid electrolyte with high mechanical flexibility and non-flammability. Firstly, the crystallinity of the polymer is reduced, and the fluidity of Li+ between the polymer segments is improved by tertiary polymer polymerization. Then, lithium salt is added to form a solpolymer solution to provide Li+ and anion and then an inorganic solid electrolyte is added. As a result, the composite solid electrolyte has a Li+ conductivity (3.18 × 10-4 mS cm-1). The (LiNi0.5Mn1.5O4)LNMO/SPLL (PES-PVC-PVDF-LiBF4-LAZTP)/Li battery has a capacity retention rate of 98.4% after 100 cycles, which is much higher than that without inorganic oxides. This research provides an important reference for developing all-solid-state batteries in the greenhouse.

Comparative transcriptome analysis between inbred lines and hybrids provides molecular insights into K+ content heterosis of tobacco (Nicotiana tabacum L.).

Potassium (K+) is essential for crop growth. Increasing the K+ content can often directly promote the improvement of crop yield and quality. Heterosis plays an important role in genetic improvement and leads to genetic gains. We found that the K+ content of tobacco showed significant heterosis, which is highly significant for cultivating tobacco varieties with high K+ content. However, the mechanism by which K+ content heterosis occurs in tobacco leaves is not clear. In this study, a comprehensive comparative transcriptome sequencing analysis of root samples from the hybrid G70 × GDH11 and its parental inbred lines G70 and GDH11 was performed to elucidate the importance of the root uptake capacity of K+ in the formation of heterosis. The results showed that 29.53% and 60.49% of the differentially expressed genes (DEGs) exhibited dominant and over-dominant expression patterns, respectively. These non-additive upregulated DEGs were significantly enriched in GO terms, such as metal ion transport and reaction, ion balance and homeostasis, ion channel activity, root meristem growth, and regulation of root hairs. The KEGG annotation results indicated that these genes were mainly involved in the pathways such as energy metabolism, carbohydrate formation, amino acid metabolism, and signal transduction. Further analysis showed that probable potassium transporter 17 (NtKT17) and potassium transporter 5-like (NtKT5), associated with potassium ion absorption, glutamate receptor 2.2-like and glutamate receptor 2.8-like, associated with ion channel activity, LOC107782957, protein detoxification 42-like, and probable glutamate carboxypeptidase 2, associated with root configuration, showed a significantly higher expression in the hybrids. These results indicated that the over-dominant expression pattern of DEGs played a key role in the heterosis of K+ content in tobacco leaves, and the overexpression of the genes related to K+ uptake, transport, and root development in hybrids helped to improve the K+ content of plants, thus showing the phenomenon of heterosis.

Overdominant expression of related genes of ion homeostasis improves K+ content advantage in hybrid tobacco leaves.

BACKGROUND: Potassium(K+) plays a vital role in improving the quality of tobacco leaves. However, how to improve the potassium content of tobacco leaves has always been a difficult problem in tobacco planting. K+ content in tobacco hybrid is characterized by heterosis, which can improve the quality of tobacco leaves, but its underlying molecular genetic mechanisms remain unclear. RESULTS: Through a two-year field experiment, G70×GDH11 with strong heterosis and K326×GDH11 with weak heterosis were screened out. Transcriptome analyses revealed that 80.89% and 57.28% of the differentially expressed genes (DEGs) in the strong and weak heterosis combinations exhibited an overdominant expression pattern, respectively. The genes that up-regulated the overdominant expression in the strong heterosis hybrids were significantly enriched in the ion homeostasis. Genes involved in K+ transport (KAT1/2, GORK, AKT2, and KEA3), activity regulation complex (CBL-CIPK5/6), and vacuole (TPKs) genes were overdominant expressed in strong heterosis hybrids, which contributed to K+ homeostasis and heterosis in tobacco leaves. CONCLUSIONS: K+ homeostasis and accumulation in tobacco hybrids were collectively improved. The overdominant expression of K+ transport and homeostasis-related genes conducted a crucial role in the heterosis of K+ content in tobacco leaves.

Combined physical confinement and chemical adsorption on co-doped hollow TiO2 for long-term cycle lithium-sulfur batteries.

Lithium-sulfur (Li-S) batteries have long been expected to be promising high-energy-density secondary batteries because of their high theoretical specific capacity and element abundances. Yet, their poor cyclability and low rate-capacity strongly limited their practical application. Herein, a nitrogen and sulfur dual doped hollow TiO2 sphere is designed and synthesized for the sulfur host. The dual doped hollow TiO2 can enhance the adsorption ability of soluble lithium polysulfides, which effectively promote the conversion reaction of lithium polysulfides from high-order to low-order in Li-S batteries. What is more, the hollow spherical TiO2 host provides a deposition space for lithium polysulfides and blocks polysulfide migration from the cathode to the electrolyte. Both theoretical calculations and experimental studies confirmed that the electrochemical properties of the sulfur electrode are significantly improved by the dual doped hollow TiO2 sphere. The typical as-prepared dual doped hollow TiO2 cathode coated sulfur has a capacity of 1258 mA h g-1 for the first discharge and a capacity decay as low as 0.0648% per cycle during 500 cycles with a sulfur loading of 3.8 mg cm-2.

Fast conversion of lithium (poly)sulfides in lithium-sulfur batteries using three-dimensional porous carbon.

The slow redox kinetics of polysulfide hinders the rapid and complete conversion between soluble polysulfides and Li2S2/Li2S, resulting in unsatisfactory rate and cycle performance in lithium-sulfur batteries. Electrochemical catalysis, one effective method, promotes the reaction kinetics and inhibits the "shuttle effect". Here, we present a three-dimensional ordered macro-porous carbon with abundant cobalt-nitrogen-carbon active sites as a matrix catalyst, leading to accelerated polysulfide redox kinetics. In addition, the interconnected conductive frameworks with ordered macro-porous carbon afford fast ion/electron transport and provide sufficient space to adapt to the volume expansion of the sulfur electrode. Owing to the aforementioned advantages, a lithium-sulfur battery with the matrix catalyst delivers a high specific capacity (1140 mA h g-1 at 0.1C) and a low capacity decay rate (0.0937% per cycle over 500 cycles). Moreover, there is a high rate capacity (349.1 mA h g-1) even at the high current density of 2C and sulfur loading of 3.8 mg cm-2 due to the improved polysulfide redox kinetics by a catalytic effect.

Encapsulation of Sulfur into N-Doped Porous Carbon Cages by a Facile, Template-Free Method for Stable Lithium-Sulfur Cathode.

Lithium-sulfur (Li-S) batteries with a high energy density and long lifespan are considered as promising candidates for next-generation electrochemical energy-storage devices. However, the sluggish redox kinetics of electrochemistry and high solubility of polysulfide during cycling render insufficient sulfur utilization and poor cycling stability. Herein, a facile, template-free procedure based on controlled pyrolysis of polydopamine vesicles is described to prepare N-doped porous carbon cages (NHSC) as a new sulfur host, which significantly improves both the sulfur utilization and cycling stability. As NHSC shows a high pore volume, continuous electron and ion transport paths, and good catalytic activity, encapsulation of S nanoparticles into NHSC endows the resulting S@NHSC electrode with a good energy storage capacity and exceptionally high electrochemical stability. Consequently, a Li-S cell with the S@NHSC as the cathode achieves a high initial capacity of 1280.7 mAh g-1 , and cycling stability over 500 cycles with the capacity decay as low as 0.0373% per cycle.

A polymer cage as an efficient polysulfide reservoir for lithium-sulfur batteries.

Herein, we present a self-assembly strategy to prepare a cage-polymer coated sulfur sample. The sample embeds graphene as a new sulfur cathode. The cathode exhibits excellent electrochemical stability, maintaining a capacity of 546 mA h g-1 after 495 cycles at 1C, corresponding to an attenuation rate of 0.071% per cycle.

Conducting Polymers Crosslinked with Sulfur as Cathode Materials for High-Rate, Ultralong-Life Lithium-Sulfur Batteries.

Low electrical conductivity and a lack of chemical confinement are two major factors that limit the rate performances and cycling stabilities of cathode materials in lithium-sulfur (Li-S) batteries. Herein, sulfur is copolymerized with poly(m-aminothiophenol) (PMAT) nanoplates through inverse vulcanization to form the highly crosslinked copolymer cp(S-PMAT) in which approximately 80 wt % of the feed sulfur is bonded chemically to the thiol groups of PMAT. A cp(S-PMAT)/C-based cathode exhibits a high discharge capacity of 1240 mAh g-1 at 0.1 C and remarkable rate capacities of 880 mAh g-1 at 1 C and 600 mAh g-1 at 5 C. Moreover, it can retain a capacity of 495 mAh g-1 after 1000 deep discharge-charge cycles at 2 C; this corresponds to a retention of 66.9 % and a decay rate of only 0.040 % per cycle. Such a remarkable rate performance is attributed to the highly conductive pathways of PMAT nanoplates, and the excellent cycling stability is ascribed mainly to the chemical confinement of sulfur through a large number of stable covalent bonds between sulfur and the thiol groups of PMAT. The results suggest that this strategy is a viable paradigm for the design and engineering of conducting polymers with reactive functional groups as effective electrode materials for high-performance Li-S batteries.