Prey decline leads to diet shift in the largest population of Indo-Pacific humpback dolphins?

The Pearl River Delta (PRD) region on the southeast coast of China has long been known as a highly productive fishing ground. Since the late 1980s, fishing pressure in the PRD has been intense, which warrants concerns of potential fishery-related impacts on the food resources and foraging ecology of apex marine predators in this region, such as the Indo-Pacific humpback dolphin (Sousa chinensis). In this study, we examined 54 stomachs with food remains, collected from beached carcasses of humpback dolphins recovered during fifteen years between 2003 and 2017. The 6043 identified prey items represent 62 teleost taxa, primarily small estuarine fish, but also larger reef fish. The dolphins appear to be opportunistic foragers, hunting across the water-column, with preference for shoaling and meaty fishes (e.g. Collichthys lucidus IRI% = 38.6%, Johnius belangerii IRI% = 23.1%, Mugil cephalus IRI% = 14.0%). Our findings suggest a dietary shift in recent years, from primarily demersal (as previously reported) to greater intake of neritic and pelagic fish. Dolphin foraging group size has decreased in recent years, which corresponds with declining size and numbers of prey items retrieved from dolphin stomachs. We suggest that these are indicators of declining food resources. Faced with a shortage of preferred prey, humpback dolphins may have broadened their dietary spectrum to maintain their daily energy intake, while their foraging group size decreased in response to the altered tradeoff between the costs and benefits of group foraging.

Low Major Histocompatibility Complex Class II Variation in the Endangered Indo-Pacific Humpback Dolphin (Sousa chinensis): Inferences About the Role of Balancing Selection.

It has been widely reported that the major histocompatibility complex (MHC) is under balancing selection due to its immune function across terrestrial and aquatic mammals. The comprehensive studies at MHC and other neutral loci could give us a synthetic evaluation about the major force determining genetic diversity of species. Previously, a low level of genetic diversity has been reported among the Indo-Pacific humpback dolphin (Sousa chinensis) in the Pearl River Estuary (PRE) using both mitochondrial marker and microsatellite loci. Here, the expression and sequence polymorphism of 2 MHC class II genes (DQB and DRB) in 32 S. chinensis from PRE collected between 2003 and 2011 were investigated. High ratios of non-synonymous to synonymous substitution rates, codon-based selection analysis, and trans-species polymorphism (TSP) support the hypothesis that balancing selection acted on S. chinensis MHC sequences. However, only 2 haplotypes were detected at either DQB or DRB loci. Moreover, the lack of deviation from the Hardy-Weinberg expectation at DRB locus combined with the relatively low heterozygosity at both DQB locus and microsatellite loci suggested that balancing selection might not be sufficient, which further suggested that genetic drift associated with historical bottlenecks was not mitigated by balancing selection in terms of the loss of MHC and neutral variation in S. chinensis. The combined results highlighted the importance of maintaining the genetic diversity of the endangered S. chinensis.

[Physiological response of corn seedlings to changes of wind-sand flow strength].

Corn seedlings are often harmed by strong wind-sand in the spring in semi-arid wind-sand area of west of Northeast China. In order to understand physiological response mechanisms of the corn seedlings to wind-sand damage, the changes in MDA content, membrane permeability, protective enzymes activities and osmotic regulation substances at 0 (CK) , 6, 9, 12, 15 and 18 m . s-1 wind speed (wind-sand flow strength: 0, 1.00, 28.30, 63.28, 111.82 and 172.93 g . cm-1 . min-1, respectively) for 10 min duration were studied during the spring, 2013 in the Horqin Sand Land of Inner Mongolia. The results showed that effects of wind-sand flow blowing on the RWC of the corn seedling were lighter in the 6-12 m . s-1 treatments, but the RWC decreased by 19.0% and 18.7% in the 15 m . s-1 and 18 m . s-1 treatments compared to the CK, respectively. The MDA content tended to decline with increasing the wind-sand flow strength, and decreased by 35.0% and 39.0% in the 15 m . s-1 and 18 m . s-1 treatments compared to the CK, respectively. The membrane permeability increased significantly with increasing the wind-sand flow strength, and increased by 191.3% and 187.8% in the 15 m . s-1 and 18 m . s-1 treatments compared to the CK, respectively. With the increase of wind-sand flow strength, SOD activities decreased and changes of CAT activities were not significant, only POD activities increased significantly, which played an important role in the process of scavenging reactive oxygen species and protecting cell membrane against damage. For lighter water stress caused, by wind-sand flow blowing, proline and soluble sugar did not play any role in osmotic adjustment, but the proline content increased by 11.4% and 24.5% in the 15 m . s-1 and 18 m . s-1 treatments compared to the CK, respectively, which played an important role in osmotic adjustment.

[Effects of sand burial on growth and physiological process of Agriophyllum squarrosum seedlings in Horqin Sand Land of Inner Mongolia, North China].

In 2010-2011, a sand burial experiment was conducted on the Horqin Sand Land of Inner Mongolia to study the growth characteristics and physiological properties of Agriophyllum squarrosum seedlings under different depths of sand burial. The A. squarrosum seedlings had stronger tolerance against sand burial. The seedling growth could be severely inhibited when the burial depth exceeded seedling height, but some seedlings could still be survived when the burial depth exceeded 1.66 times of seedling height. When the burial depth did not exceed the seedling height, the seedling MDA content and membrane permeability had no significant change, but the lipid peroxidation was aggravated and the cell membrane was damaged with increasing burial depth. Under sand burial stress, the seedling SOD and POD activities and proline content increased significantly, while the seedling CAT activity and soluble sugar content deceased. Sand burial decreased the leaf photosynthetic area and damaged cell membrane, inducing the increase of seedling mortality and the inhibition of seedling growth. The increase of SOD and POD activities and proline content played a definite role in reducing the sand burial damage to A. squarrosum seedlings.

[Detection of BCR/ABL fusion gene by fluorescence in situ hybridization and its clinical application].

This study was aimed to investigate the clinical value of detecting BCR/ABL fusion gene by fluorescence in situ hybridization (FISH). The conventional cytogenetic test and detection of BCR/ABL fusion gene by FISH for bone marrow of patients with newly diagnosed chronic myeloproliferative disease or myelodysplastic and myeloproliferative disorders, acute lymphocytic leukemia and chronic myelogenous leukemia (CML) after allogeneic hematopoietic stem cell transplantation were carried out. The results showed that (1) out of 46 newly diagnosed as chronic myeloproliferative disease or myelodysplastic and myeloproliferative disorders, 22 cases were diagnosed as CML, the FISH detection showed all positive (100%), while cytogenetic test showed 86.4% (19/22) positive, in the other 24 patients who were diagnosed as other chronic myeloproliferative disease or myelodysplastic and myeloproliferative disorders, BCR/ABL fusion gene all were be detected as negative 100% by FISH, while the cytogenetic test of bone marrow in 3 cases supported the diagnosis of CML, and the diagnosis of myelodysplastic disorder in 1 case; (2) in 3 out of 7 acute lymphocytic leukemia cases the BCR/ABL fusion gene could not be detected by FISH; (3) the BCR/ABL fusion gene could be detected by FISH in 2 cases of CML received allogeneic hematopoietic stem cell transplantation, with abnormal threshold 6.5% and 1.2% respectively. It is concluded that the detection of BCR/ABL fusion gene by FISH is sensitive and reliable, which is very important for the diagnosis and differential diagnosis of chronic myeloproliferative disorders, myelodysplastic and myeloproliferative disease, as well as definite diagnosis of Ph(+) acute lymphoblastic leukemia. This method also has an important significance for monitor of minimal residual disease in CML patients received allogeneic hematopoietic stem cell transplantation.

[Anti GVHD effect of the induction of immune tolerance in rats embryo].

OBJECTIVE: To investigate whether the fetal immune tolerance induction could replace the HLA typing for hematopoietic stem cell transplantation. METHODS: Immune tolerance of SD rats was induced by injecting host Wistar rats peripheral blood mononuclear cells into yolk sac of the embryo, afterward the mature male offsprings were used as donor. The host female recipients received lethal dose irradiation and bone marrow transplantation(BMT). The Wistar rats transplanted with bone marrow from donor and unrelated SD rats as well as the rats which received radiation alone were used as control. The survival, histopathologically GVHD, the mental status, food and water intake, coat characteristics, activities were observed. Forty days after BMT, autologous and allogenous skin transplantation between donor and recipient rats was performed to observe the engraftment of solid organ. RESULTS: The survival of the rats received bone marrow grafts from the immune tolerant donor was significantly longer than that of control groups (30 day survival rates were 86.7%, 6.7%, 0%, and 0% respectively), and there was no histopathologically GVHD observed, while in the sham group, the manifestations of GVHD was clearly visible. The skin engraftment rate between the host and the immune tolerant donor was significantly higher than that among non-related rats (84.6% and 0% respectively). CONCLUSION: The induction of immune tolerance in embryo can overcome the HLA barrier and provide a good donor for hematopoietic stem cell and solid organ transplantation.

Evolution of Sousa chinensis: a scenario based on mitochondrial DNA study.

Taxonomy within genus Sousa is confused largely due to inconsistencies among external morphology, skull morphology, pigmentation patterns and molecular studies. Here we provide our understanding of the evolution of Sousa chinensis by proposing a phylogeographic history based on mtDNA study. It is proposed that the species originated in eastern Australian waters and the current distribution has taken shape over the last 8.02-1.24 million years. Populations in Southeast Asia and Australian region experienced recent expansion about 0.54-1.5 million years ago. It is also proposed that populations in Southeast Asia experienced separation, re-unification and further dispersal during the last glacial age with multiple north-south migration across the Sahul Shelf area of northern Australia.

[Effects of vegetation cover on physical and chemical properties of bio-crust and under-layer soil in Horqin Sand Land].

To understand the effects of different vegetation cover on the bio-crust and its under-layer soil in Horqin Sand Land, the bio-crust and 0-5 cm soil samples in Artemisia frigida, Salix microstachya, Populus simonii, and Pinus sylvestris var. mongolica stands were collected, and their physical and chemical properties were studied. After fifteen years enclosure protection and vegetation establishment, the flowing sand dune in most natural and artificial vegetation sites was covered with bio-crusts. The coverage degree of the crust was 50%-80%, with a thickness of 1-2 cm. In S. microstachya stand, the crust thickness, hardness, and organic matter and nutrient contents were the highest, followed by in P. sylvestris var. mongolica stand, and in A. frigida and A. frigida stands. Moss crust had higher thickness, hardness, and organic matter and nutrient contents than lichen crust. Comparing with those in flowing sand land, the physical and chemical properties of under-layer soil in test stands were improved obviously, the improvement degree being higher under moss crust than under lichen crust, and higher in S. microstachya and P. sylvestris var. mongolica stands than in A. frigida and P. simonii stands. Vegetations with moderate height and rich branches and leaves were more helpful to the development of bio-crust and the improvement of under-layer soil, because they could reduce wind velocity and accumulate more dust and litters, and the development of moss crust was more favorable than lichen crust to the improvement of its under-layer soil.

Microdissection of shoot meristem functional domains.

The shoot apical meristem (SAM) maintains a pool of indeterminate cells within the SAM proper, while lateral organs are initiated from the SAM periphery. Laser microdissection-microarray technology was used to compare transcriptional profiles within these SAM domains to identify novel maize genes that function during leaf development. Nine hundred and sixty-two differentially expressed maize genes were detected; control genes known to be upregulated in the initiating leaf (P0/P1) or in the SAM proper verified the precision of the microdissections. Genes involved in cell division/growth, cell wall biosynthesis, chromatin remodeling, RNA binding, and translation are especially upregulated in initiating leaves, whereas genes functioning during protein fate and DNA repair are more abundant in the SAM proper. In situ hybridization analyses confirmed the expression patterns of six previously uncharacterized maize genes upregulated in the P0/P1. P0/P1-upregulated genes that were also shown to be downregulated in leaf-arrested shoots treated with an auxin transport inhibitor are especially implicated to function during early events in maize leaf initiation. Reverse genetic analyses of asceapen1 (asc1), a maize D4-cyclin gene upregulated in the P0/P1, revealed novel leaf phenotypes, less genetic redundancy, and expanded D4-CYCLIN function during maize shoot development as compared to Arabidopsis. These analyses generated a unique SAM domain-specific database that provides new insight into SAM function and a useful platform for reverse genetic analyses of shoot development in maize.

Metabolic flux maps comparing the effect of temperature on protein and oil biosynthesis in developing soybean cotyledons.

Metabolic flux maps developed from 13C metabolic flux analysis (13C MFA) are effective tools for assessing the response of biological systems to genetic or environmental perturbations, and for identifying possible metabolic engineering targets. Experimental treatments were designed to distinguish between temperature effects prior to, and during incubation in vitro, on primary metabolism in developing soybeans. Biomass accumulation increased with temperature as did carbon partitioning into lipids. The flux through the plastidic oxidative pentose phosphate pathway (pgl(P)) relative to sucrose intake remained fairly constant [ approximately 56% (+/-24%)] when cotyledons were transferred from an optimum growth temperature to varying temperatures in in vitro culture, signifying a rigid node under these conditions. However, pgl(P) flux ranged from 57 to 77% of sucrose intake when growth temperature in planta varied and were cultured in vitro at the same temperature (as the plant), indicating a flexible node for this case. The carbon flux through the anaplerotic reactions catalysed by plastidic malic enzyme (me(P)), cytosolic phosphoenolpyruvate (PEP) carboxylase and the malate (Mal) transporter from the cytosol to mitochondrion varied dramatically with temperature and had a direct influence on the carbon partitioning into protein and oil from the plastidic pyruvate (Pyr) pool. These results of the in vitro culture indicate that temperature during early stages of development has a dominant effect on establishing capacity for flux through certain components of central carbon metabolism.

Global gene expression analysis of the shoot apical meristem of maize (Zea mays L.).

All above-ground plant organs are derived from shoot apical meristems (SAMs). Global analyses of gene expression were conducted on maize (Zea mays L.) SAMs to identify genes preferentially expressed in the SAM. The SAMs were collected from 14-day-old B73 seedlings via laser capture microdissection (LCM). The RNA samples extracted from LCM-collected SAMs and from seedlings were hybridized to microarrays spotted with 37 660 maize cDNAs. Approximately 30% (10 816) of these cDNAs were prepared as part of this study from manually dissected B73 maize apices. Over 5000 expressed sequence tags (ESTs) (about 13% of the total) were differentially expressed (P < 0.0001) between SAMs and seedlings. Of these, 2783 and 2248 ESTs were up- and down-regulated in the SAM, respectively. The expression in the SAM of several of the differentially expressed ESTs was validated via quantitative RT-PCR and/or in situ hybridization. The up-regulated ESTs included many regulatory genes including transcription factors, chromatin remodeling factors and components of the gene-silencing machinery, as well as about 900 genes with unknown functions. Surprisingly, transcripts that hybridized to 62 retrotransposon-related cDNAs were also substantially up-regulated in the SAM. Complementary DNAs derived from the LCM-collected SAMs were sequenced to identify additional genes that are expressed in the SAM. This generated around 550 000 ESTs (454-SAM ESTs) from two genotypes. Consistent with the microarray results, approximately 14% of the 454-SAM ESTs from B73 were retrotransposon-related. Possible roles of genes that are preferentially expressed in the SAM are discussed.

[Effects of desertification on C and N storages in grassland ecosystem on Horqin sandy land].

Sandy grassland is widespread in northern China, where desertification is very common because of overgrazing and estrepement. However, little is known about the effects of desertification on grassland C and N storages in this region. A field survey was conducted on Horqin sandy grassland, and desertification gradients were established to evaluate the effects of desertification on C and N storages in soil, plant, and litter. The results showed that desertification had deep effects on the contents and storages of grassland C and N. The C and N contents and storages in the grassland decreased significantly with increasing desertification degree. Comparing with those in un-desertified grassland, the C and N contents in lightly, moderately, heavily, and severely desertified grasslands decreased by 56.06% and 48.72%, 78.43% and 74.36%, 88.95% and 84.62%, and 91.64% and 84.62% in 0-100 cm soil layer, and by 8.61% and 6.43%, 0.05% and 25.71%, 2.58% and 27.14%, and 8. 61% and 27. 86% in plant components, respectively. Relevantly, the C and N storages decreased by 50.95% and 43.38%, 75.19% and 71.04%, 86.76% and 81.48%, and 91.17% and 83.17% in plant underground components in 0-100 cm soil layer, and by 25.08% and 27.62%, 30.90% and 46.55%, 73.84% and 80.62%, and 90.89% and 87.31% in plant aboveground components, respectively. In 2000, the total area of desertified grassland in Horqin sandy land was 30152. 7 km2, and the C and N loss via desertification reached up to 107.53 and 9.97 Mt, respectively. Correlation analysis indicated that the decrease of soil C and N contents was mainly come from the decreased soil fine particles caused by wind erosion in the process of desertification, and the degradation of soil texture- and nutrient status led finally to the rapid decrease of C and N storages in plant biomass and litter.

Quantification of compartmented metabolic fluxes in developing soybean embryos by employing biosynthetically directed fractional (13)C labeling, two-dimensional [(13)C, (1)H] nuclear magnetic resonance, and comprehensive isotopomer balancing.

Metabolic flux quantification in plants is instrumental in the detailed understanding of metabolism but is difficult to perform on a systemic level. Toward this aim, we report the development and application of a computer-aided metabolic flux analysis tool that enables the concurrent evaluation of fluxes in several primary metabolic pathways. Labeling experiments were performed by feeding a mixture of U-(13)C Suc, naturally abundant Suc, and Gln to developing soybean (Glycine max) embryos. Two-dimensional [(13)C, (1)H] NMR spectra of seed storage protein and starch hydrolysates were acquired and yielded a labeling data set consisting of 155 (13)C isotopomer abundances. We developed a computer program to automatically calculate fluxes from this data. This program accepts a user-defined metabolic network model and incorporates recent mathematical advances toward accurate and efficient flux evaluation. Fluxes were calculated and statistical analysis was performed to obtain sds. A high flux was found through the oxidative pentose phosphate pathway (19.99 +/- 4.39 micromol d(-1) cotyledon(-1), or 104.2 carbon mol +/- 23.0 carbon mol per 100 carbon mol of Suc uptake). Separate transketolase and transaldolase fluxes could be distinguished in the plastid and the cytosol, and those in the plastid were found to be at least 6-fold higher. The backflux from triose to hexose phosphate was also found to be substantial in the plastid (21.72 +/- 5.00 micromol d(-1) cotyledon(-1), or 113.2 carbon mol +/-26.0 carbon mol per 100 carbon mol of Suc uptake). Forward and backward directions of anaplerotic fluxes could be distinguished. The glyoxylate shunt flux was found to be negligible. Such a generic flux analysis tool can serve as a quantitative tool for metabolic studies and phenotype comparisons and can be extended to other plant systems.

[Effect of grazing on sandy grassland ecosystem in Inner Mongolia].

This experiment was carried out for 5 years in Horqin sandy land, lnner Mongolia, which had 4 treatments: Non-grazing (NG), light grazing (LG), moderate grazing (MG) and over grazing (OG). The results showed that different grazing intensities resulted in different development trend of the pasture ecosystem, of which, the injury of OG on pasture ecosystem was very great. The plant diversity, vegetation coverage, plant height and primary productivity under continuous overgrazing for 5 year were 87.9%, 82.1%, 94.0% and 57.0%, respectively, lower than those in NG. The biomass on the OG pasture was only 2.1% of NG, and the contents of soil clay, C and N as well as the quantities of soil microbes and small animals in OG were respectively 6.0%, 31.9%, 25.0%, 95.0% and 75.9% lower than those in NG, but the soil hardness was raised by 274.0%. Especially, the secondary productivity of the pasture became negative from the third year, and the productive foundation of the pasture ecosystem was completely destroyed. Non-grazing was beneficial to pasture, and enclosure caused an increase in vegetation coverage, plant height and primary productivity. The vegetation coverage, plant height and soil status in LG and MG were not as good as those in NG, but were stable and didn't show worsening trend. Based on the above results, it's considered that on the sandy pasture in the semi-arid area of Inner Mongolia, the rational grass utilization ratio is 45%-50%, and the suitable loading capacity is 3-4 sheep unit.hm-2.

[Influence of saltwater irrigation on the yield and quality of Cynodon dactylon under desert conditions].

Responses of six varieties (Suwannee, Coast cross, Tifton44, Tifton68, Tifton78 and Tifton85) of Cynodon dactylon to irrigation-water salinity were investigated in field by means of a double line source experimental design. The digestibility of the grass by goat was analyzed using the rumen gastric justice digestion method. The results showed that the six varieties grew well, and had a high yield of fresh grass when eletro-conductivity (Eci) < 10 ds.m-1. Particularly when Eci = 4.4 ds.m-1, the fresh grass yield of Coast cross, Suwannee, Tifton44, Tifton68, Tifton78 and Tifton85 was respectively increased by 142.1%, 61.1%, 136%, 121.1%, 202.3% and 109.7%, in comparison with fresh water (Eci = 1.2) irrigation. Dry matter yield was also elevated with the increasing salinity of irrigated water. There was no obvious effect of salinity on crude protein, fiber and ash contents in the six varieties. Goats were fond of eating the hay irrigated by saline water, perhaps because of its higher digestibility. At least, the yield and quality of Cynodon dactylon were not effected by saltwater irrigation.