Bioactive Compounds from Vicia sativa L. and Vicia monantha Retz. with Unveiling Antiviral Potentials in Newly Green Synthesized CdO Nanoparticles.

BACKGROUND: in the current study, a comparative phytochemical analysis was carried out to explore the phenolic and flavonoid contents in the aerial parts of Vicia sativa L and Vicia monantha Retz growing in cultivated, reclaimed, and desert habitats. METHODS: High-performance liquid chromatography (HPLC) was used to detect Vicia methanolic extracts' individual phenolic and flavonoid constituents. The first-time synthesis of cadmium oxide nanoparticles (CdO NPs) using the aqueous extract of V. monantha has been developed using a green approach. Also, the cytotoxicity of V. monantha extract and CdO NPs was examined using 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) assay for unveiling them as anti-HAV and anti-AdV. RESULTS: Our results indicated that in the case of desert habitat, the contents of total phenolics (76.37 mg/g) and total flavonoids (65.23 mg/g) of V. monantha were higher than those of V. sativa (67.35 mg/g and 47.34 mg/g, respectively) and the contents of these secondary metabolites were even increased in V. monantha collected from reclaimed land (phenolics: 119.77 mg/g, flavonoids: 88.61 mg/g). Also, V. monantha surpassed V. sativa in the contents of some individual HPLC constituents, and hence, V. monantha was used to synthesize the green CdO NPs and subsequent antiviral tests. The average size of CdO NPs was determined to be 24.28 nm, and the transmission electron microscopy (TEM) images of CdO NPs clearly showed their spherical form and varying particle sizes, with different diameters in the range of 19-29 nm. MTT assay was positive to the exposure of CdO NPs in the normal cell line, proposing that CdO NPs can reduce cell viability. V. monantha extract showed promising antiviral activity against Hepatitis A virus (HAV) and Adenovirus (AdV) with SI of 16.40 and 10.54. On the other hand, CdONPs had poor antiviral activity against HAV with an SI of 4.74 and moderate antiviral activity against AdV with an SI of 10.54. CONCLUSION: V. monantha is now considered a new, valuable natural resource for phenolics and flavonoids, especially when grown in reclaimed soil. The green CdO NPs based on V. monantha extract showed a promising antiviral effect against HAV and AdV.

Antioxidant, anti-inflammatory, and anti-apoptotic effects of genkwanin against aflatoxin B1-induced testicular toxicity.

Aflatoxin B1 (AFB1) is the most hazardous aflatoxin that causes significant damage to the male reproductive system. Genkwanin (GNK) is a bioactive flavonoid that shows antioxidant and anti-inflammatory potential. Therefore, the current study was planned to evaluate the effects of GNK against AFB1-induced testicular toxicity. Forty-eight male rats were distributed into four groups (n = 12 rats). AFB1 (50 µg/kg) and GNK (20 mg/kg) were administered to the rats for eight weeks. Results of the current study revealed that AFB1 exposure induced adverse effects on the Nrf2/Keap1 pathway and reduced the expressions and activities of antioxidant enzymes. Additionally, it increased the levels of oxidative stress markers. Furthermore, expressions of steroidogenic enzymes were down-regulated by AFB1 intoxication. Besides, AFB1 exposure reduced the levels of gonadotropins and plasma testosterone, which subsequently reduced the epididymal sperm count, motility, and hypo-osmotic swelled (HOS) sperms, while increasing the number of dead sperms and causing morphological anomalies of the head, midpiece, and tail of the sperms. In addition, AFB1 decreased the activities of testicular function marker enzymes and the levels of inflammatory markers. Moreover, it severely affected the apoptotic profile by up-regulating the expressions of Bax and Casp3, while down-regulating the Bcl2 expression. Besides, AFB1 significantly damaged the histoarchitecture of testicular tissues. However, GNK treatment reversed all the AFB1-induced damages in the rats. Taken together, the current study reports the potential use of GNK as a therapeutic agent to prevent AFB1-induced testicular toxicity due to its antioxidant, anti-inflammatory, and anti-apoptotic properties.

Genomic and phenotypic biology of a novel Dickeya zeae WH1 isolated from rice in China: Insights into pathogenicity and virulence factors.

Soft rot caused by Dickeya zeae is an important bacterial disease affecting rice and other plants worldwide. In this study, Nanopore and Illumina sequencing platforms were used to sequence the high-quality complete genome of a novel D. zeae strain WH1 (size: 4.68 Mb; depth: 322.37x for Nanopore, 243.51x for Illumina; GC content: 53.59%), which was isolated from healthy rice root surface together with Paenibacillus polymyxa, a potential biocontrol bacterium against D. zeae strain WH1. However, the pure WH1 culture presented severe pathogenicity. Multilocus sequence analysis (MLSA) indicated that strains WH1, EC1, and EC2 isolated from rice were grouped into a clade differentiated from other D. zeae strains. The average nucleotide identity (ANI) and DNA-DNA hybridization (DDH) analyses demonstrated that WH1 was phylogenetically closest to EC2. Furthermore, the pathogenicity determinants and virulence factors of WH1 were mainly analyzed through genomic comparison with complete genomes of other D. zeae strains with high virulence (EC1, EC2, MS1, and MS2). The results revealed that plant cell wall-degrading extracellular enzymes (PCWDEs), flagellar and chemotaxis, and quorum sensing were highly conserved in all analyzed genomes, which were confirmed through phenotypic assays. Besides, WH1 harbored type I, II, III, and VI secretion systems (T1SS, T2SS, T3SS, and T6SS), but lost T4SS and T5SS. Like strains MS1 and MS2 isolated from bananas, WH1 harbored genes encoding both capsule polysaccharide (CPS) and exopolysaccharide (EPS) biosynthesis. The results of pathogenicity assays demonstrated that WH1 produced severe soft rot symptoms on potato tubers, carrots, radishes, and Chinese cabbage. Meanwhile, WH1 also produced phytotoxin(s) to inhibit rice seed germination with an 87% inhibitory rate in laboratory conditions. More importantly, we confirmed that phytotoxin(s) produced by WH1 are different from zeamines produced by EC1. Comparative genomics analyses and phenotypic and pathogenicity assays suggested that WH1 likely evolved through a pathway different from the other D. zeae strains from rice, producing a new type of rice foot rot pathogen. These findings highlight the emergence of a new type of D. zeae strain with high virulence, causing soft rot in rice and other plants.

[Using shape analysis to inform variation in otolith morphology with life stages of Dissostichus mawsoni]. / 基于形态分析探究鳞头犬牙南极鱼各生活史阶段耳石形态变化.

As the most important domestic fish in the Antarctic Ocean, Antarctic toothfish (Dissostichus mawsoni) has an important ecological role and high commercial value. The otolith morphology of fish species differs across stages of life history. Therefore, otolith shape analysis can be used to infer life history of D. mawsoni. In this study, otoliths from 120 D. mawsoni individuals with four life stages randomly collected from the Ross Sea, Amundsen Sea, Weddell Sea and Lazarev Sea were used to analyze the otolith morphological differences of D. mawsoni at life stages by conventional measurement and elliptical Fourier analysis. The results showed that variation in otolith morphology occurred across life stages. Generally, the morphology of otolith was changed from smooth and low comple-xity to zigzagging and high complexity. The growth rate of otolith along the longitudinal direction was lower than that along the transverse direction. The characteristic parts of otolith, such as antirostrum, changed significantly across life stages. Compared to the linear discriminant analysis (71.9%), the elliptical Fourier analysis had the higher discrimination rate (85.4%), indicating that the elliptical Fourier analysis was more suitable to analyze the otolith morphology of D. mawsoni.

A bifunctional enzyme belonging to cytochrome P450 family involved in the O-dealkylation and N-dealkoxymethylation toward chloroacetanilide herbicides in Rhodococcus sp. B2.

BACKGROUND: The chloroacetamide herbicides pretilachlor is an emerging pollutant. Due to the large amount of use, its presence in the environment threatens human health. However, the molecular mechanism of pretilachlor degradation remains unknown. RESULTS: Now, Rhodococcus sp. B2 was isolated from rice field and shown to degrade pretilachlor. The maximum pretilachlor degradation efficiency (86.1%) was observed at a culture time of 5 d, an initial substrate concentration 50 mg/L, pH 6.98, and 30.1 °C. One novel metabolite N-hydroxyethyl-2-chloro-N-(2, 6-diethyl-phenyl)-acetamide was identified by gas chromatography-mass spectrometry (GC-MS). Draft genome comparison demonstrated that a 32,147-bp DNA fragment, harboring gene cluster (EthRABCDB2), was absent from the mutant strain TB2 which could not degrade pretilachlor. The Eth gene cluster, encodes an AraC/XylS family transcriptional regulator (EthRB2), a ferredoxin reductase (EthAB2), a cytochrome P450 monooxygenase (EthBB2), a ferredoxin (EthCB2) and a 10-kDa protein of unknown function (EthDB2). Complementation with EthABCDB2 and EthABDB2, but not EthABCB2 in strain TB2 restored its ability to degrade chloroacetamide herbicides. Subsequently, codon optimization of EthABCDB2 was performed, after which the optimized components were separately expressed in Escherichia coli, and purified using Ni-affinity chromatography. A mixture of EthABCDB2 or EthABDB2 but not EthABCB2 catalyzed the N-dealkoxymethylation of alachlor, acetochlor, butachlor, and propisochlor and O-dealkylation of pretilachlor, revealing that EthDB2 acted as a ferredoxin in strain B2. EthABDB2 displayed maximal activity at 30 °C and pH 7.5. CONCLUSIONS: This is the first report of a P450 family oxygenase catalyzing the O-dealkylation and N-dealkoxymethylation of pretilachlor and propisochlor, respectively. And the results of the present study provide a microbial resource for the remediation of chloroacetamide herbicides-contaminated sites.

Persistent organic pollution in Antarctic marine biota: Level, transport and risk assessment.

Although the Antarctic is considered as a pristine region away from human pollution, traditional and emerging persistent organic pollutants (POPs), such as organochlorine pesticides (OCPs), polychlorinated biphenyls (PCBs), polybrominated diphenyl ethers (PBDEs) and per-/polyfluoroalkyl substances (PFASs), have been constantly detected in the Antarctic, which received global concerns. POPs are persistent and toxic, prone to accumulate in organisms and further pose environmental risks. In order to understand their biogeochemical processes as well as impacts on organisms in the Antarctic, we summarized the research status of POPs in different trophic levels in the Antarctic marine, combining their living habits. We also proposed the future research directions of POPs in the vulnerable Antarctic ecosystem. Researches showed that the Antar-ctic was the region under the lowest pollution level all over the world. However, the types of POPs in Antarctic marine organisms were increasing in the past decades, meaning the area was affected increasingly by the activities inside and/or outside of this area. Scattered research data and different techniques hamper red the elucidation about the mechanism of POPs transport along the food chain. It is urgent to establish long-term monitoring and assessment program on POPs dynamics of Antarctic marine ecosystem.

Mapping leprosy-associated coding variants of interleukin genes by targeted sequencing.

Previous genotyping-based assays have identified non-coding variants of several interleukins (ILs) being associated with genetic susceptibility to leprosy. However, understanding of the involvement of coding variants within all IL family genes in leprosy was still limited. To obtain the full mutation spectrum of all ILs in leprosy, we performed a targeted deep sequencing of coding regions of 58 ILs genes in 798 leprosy patients (age 56.2 ± 14.4; female 31.5%) and 990 healthy controls (age 38.1 ± 14.0; female 44.3%) from Yunnan, Southwest China. mRNA expression alterations of ILs in leprosy skin lesions or in response to M. leprae treatment were estimated by using publicly available expression datasets. Two coding variants in IL27 (rs17855750, p.S59A, p = 4.02 × 10-8 , odds ratio [OR] = 1.748) and IL1RN (rs45507693, p.A106T, p = 1.45 × 10-5 , OR = 3.629) were significantly associated with leprosy risk. mRNA levels of IL27 and IL1RN were upregulated in whole blood cells after M. leprae stimulation. These data showed that IL27 and IL1RN are leprosy risk genes. Further functional study is required for characterizing the exact role of ILs in leprosy.

Isocitrate dehydrogenase 1 from Acinetobacter baummanii (AbIDH1) enzymatic characterization and its regulation by phosphorylation.

Acinetobacter baumannii encodes all enzymes required in the tricarboxylic acid (TCA) cycle and glyoxylate bypass except for isocitrate dehydrogenase kinase/phosphatase (IDHKP), which can phosphorylate isocitrate dehydrogenase (IDH) at a substrate-binding Ser site and control the carbon flux in enterobacteria, such as Escherichia coli. The potential kinase was not successfully pulled down from A. baumannii cell lyase; therefore, whether the IDH 1 from A. baumannii (AbIDH1) can be phosphorylated to regulate intracellular carbon flux has not been clarified. Herein, the AbIDH1 gene was cloned, the encoded protein was expressed and purified to homogeneity, and phosphorylation and enzyme kinetics were evaluated in vitro. Gel filtration and SDS-PAGE analyses showed that AbIDH1 is an 83.5 kDa homodimer in solution. The kinetics showed that AbIDH1 is a fully active NADP-dependent enzyme. The Michaelis constant Km is 46.6 (Mn2+) and 18.1 µM (Mg2+) for NADP+ and 50.5 (Mn2+) and 65.4 µM (Mg2+) for the substrate isocitrate. Phosphorylation experiments in vitro indicated that AbIDH1 is a substrate for E. coli IDHKP. The activity of AbIDH1 treated with E. coli IDHKP immediately decreased by 80% within 9 min. Mass spectrometry indicated that the conserved Ser113 of AbIDH1 is phosphorylated. Continuous phosphorylation-mimicking mutants (Ser113Glu and Ser113Asp) lack almost all enzymatic activity. Side-chain mutations at Ser113 (Ser113Thr, Ser113Ala, Ser113Gly and Ser113Tyr) remarkably reduce the enzymatic activity. Understanding the potential of AbIDH1 phosphorylation enables further investigations of the AbIDH1 physiological functions in A. baumannii.

Biochemical Characterization and Crystal Structure of a Novel NAD+-Dependent Isocitrate Dehydrogenase from Phaeodactylum tricornutum.

The marine diatom Phaeodactylum tricornutum originated from a series of secondary symbiotic events and has been used as a model organism for studying diatom biology. A novel type II homodimeric isocitrate dehydrogenase from P. tricornutum (PtIDH1) was expressed, purified, and identified in detail through enzymatic characterization. Kinetic analysis showed that PtIDH1 is NAD+-dependent and has no detectable activity with NADP+. The catalytic efficiency of PtIDH1 for NAD+ is 0.16 µM-1·s-1 and 0.09 µM-1·s-1 in the presence of Mn2+ and Mg2+, respectively. Unlike other bacterial homodimeric NAD-IDHs, PtIDH1 activity was allosterically regulated by the isocitrate. Furthermore, the dimeric structure of PtIDH1 was determined at 2.8 Å resolution, and each subunit was resolved into four domains, similar to the eukaryotic homodimeric NADP-IDH in the type II subfamily. Interestingly, a unique and novel C-terminal EF-hand domain was first defined in PtIDH1. Deletion of this domain disrupted the intact dimeric structure and activity. Mutation of the four Ca2+-binding sites in the EF-hand significantly reduced the calcium tolerance of PtIDH1. Thus, we suggest that the EF-hand domain could be involved in the dimerization and Ca2+-coordination of PtIDH1. The current report, on the first structure of type II eukaryotic NAD-IDH, provides new information for further investigation of the evolution of the IDH family.

[Spatial-temporal variation in hotspot and coldspot of Antarctic krill distribution in recent 100 years]. / 近百年来南极磷虾分布冷热点的时空变动.

To analyze the long-term variation in the spatial-temporal patterns of Antarctic krill (Euphausia superba) distribution, based on krill density data collected from 1926 to 2016, we analyzed the spatial and temporal variation of krill using the Getis-Ord Gi* statistic and the Triangulated Irregular Network (TIN) model. We compared the krill abundance, the percentage of krill abundance, and the size of hotspot/coldspot area. The results showed that there were one core hot-spot area, one sub-hotspot area and one edge hotspot area from 1926 to 1935 and from 1936 to 1945; one core hotspot area, one sub-hotspot area and one edge hotspot/coldspot area from 1976 to 1985; two core hotspot areas, two sub-hotspot areas, two edge hotspot areas, one sub-coldspot area and one coldspot area from 1986 to 1995; two core hotspot areas, two sub-hotspot/sub-coldspot areas and two edge hotspot/coldspot areas from 1996 to 2005; and from 2006 to 2016, there were two sub-hotspot areas, two edge hotspot areas, one sub-coldspot area and one edge coldspot area, respectively. Those hotspots/coldspots mostly occurred in the South Sandwich Islands, the Antarctic Peninsula, and the west of the Prydz Bay. From 1926 to 2016, krill abundance, the percentage of krill abundance in the hotspot area and the size of hotspot area had generally reduced, but the percentage of krill abundance in coldspot area and the size of coldspot area were increasing, while krill abundance in coldspot area decreased. It is a feasible approach to build an irregular triangle network to measure the size of hotspot/coldspot area and utilize hotspot analysis with 95% confidence to analyze the spatial-temporal pattern of krill distribution.

[Behavioral and physiological ecology of Antarctic krill (Euphausia superba): A review]. / å—æžç£·è™¾è¡Œä¸ºä¸Žç”Ÿç†ç”Ÿæ€å­¦ç ”ç©¶è¿›å±•.

Behavioral and physiological ecology are two important research aspects of ecological field. Related studies help us better understand the marine animal's habit and adaptability to environment. Antarctic krill (Euphausia superba, thereafter krill) is a key-stone species in the Southern Ocean. Understanding its behavioral and physiological ecology can understand the ability of marine organisms such as krill to cope with extreme environment. We summarized the typical ecological characteristics of krill from both aspects of behavioral ecology and physiological ecology. Behavioral ecology included its swarming (size and behavior) and swimming (angle, beat of pleopod), while physiological ecology included respiration, excretion, metabolism, molting and growth. Generally, the studies on behavioral and physiological ecology of krill were very limited, and many studies were based on land-based krill aquarium. In view of the large difference between land-based aquarium and natural environment of krill, it's extremely urgent to develop the in-situ experimental ecology of krill in the sea.

Comparison Among Five Eucalyptus Species Based on Their Leaf Contents of Some Primary and Secondary Metabolites.

BACKGROUND: Eucalyptus belongs to the Myrtaceae family. It is the most planted hardwood forest crop worldwide, representing a global renewable resource of fiber, pharmaceuticals and energy. OBJECTIVE: To compare the five species, E. maidenii, E. robusta, E. citriodora, E. tereticornis and E. camaldulensis, seeking for the richest source of nutrients and pharmaceuticals. METHODOLOGY: Eucalyptus samples were subjected to some chemical determinations for both primary and secondary metabolites to verify their nutritional and pharmaceutical importance related to different extracts. GC-MS analysis was applied to detect the presence of some individual phenolic constituents in their leaves. RESULTS: E. robusta recorded the maximum contents of carbohydrates (40.07%) and protein (31.91%). While E. camaldulensis contained the highest contents of total phenolic compounds (46.56 mg/g), tannins (40.01 mg/g) and antioxidant activities assayed by the phosphomolybednum method (57.60 mg/g), followed by E. citridora. However, E. tereticornis exhibited the highest reducing power ability (151.23 mg/g). The GC-MS highlighted 20 phenolic constituents and antioxidants which varied in their abundance in Eucalyptus leaves, 8 individual phenolics (hydroquinone, hesperitin, pyrogallol, resorcinol, protocatechuic acid, naringenin, chlorogenic acid and catechin) were maximally recorded with E. camaldulensis and secondly, with E. citridora in case of at least 5 components. Nevertheless, gallic and quinic acids were more abundant in the leaves of E. tereticornis, which may explain its high corresponding reducing powers. CONCLUSION: Acetone-water combination has enhanced phenolics extraction from Eucalyptus tissues. This is the first report aiming to compare between the aforementioned Eucalyptus species highlighting either their nutritional or medicinal importance.

Phenolic compounds and antioxidants from Eucalyptus camaldulensis as affected by some extraction conditions, a preparative optimization for GC-MS analysis.

Four organic solvents along with water were applied for the conventional extraction of Eucalyptus camaldulensis (Myrtaceae), phenolic contents and antioxidant activities were investigated through variable protocols and correlation coefficients were considered, the phenolic composition was also characterized by Gas chromatography-mass spectrometry (GC-MS). Using solvents with dissimilar polarities affected the phenolic yields extracted from E. camaldulensis and their related antioxidant activities varied significantly among the four investigated plant organs. The leaf extract of acetone 70% contained the highest amount of phenolic compounds (46.56 mg/g dry weight); while the bud-water boiled extract maintained the maximum value of tannins (45.68 mg/g dry weight). Correlation coefficients indicated that phenolic compounds were mostly accountable for the phosphomolybednum antioxidant potentials (0.520), followed by tannins (0.460). Also, both the reducing power activities and hydrogen peroxide scavenging of E. camaldulensis extracts positively correlated with tannins, but at different significance degrees. However, the GC-MS analysis revealed that most of the detected phenolic constituents were more abundant in the plant seed. So, the existence of some other compounds such as organic acids, along with phenolics, may have increased the antioxidant potentials of leaf and bud. Undeniably, the optimization of extraction conditions could stimulate the antioxidant capabilities of the plant extracts of E. camaldulensis.

Comparative effects of some extraction solvents on the antimicrobial activity of Eucalyptus camaldulensis leaf, bud, capsule and seed crude extracts.

Well diffusion method was used to evaluate the antibacterial activity of Eucalyptus camaldulensis, while the antifungal effect was assessed by calculating the reduction percent in the radial growth of mycelia. The inhibition zones exerted by E. camaldulensis crude extracts varied significantly (p ≤ 0.01). The capsule crude extract (acetone 30%) highly inhibited the growth of Acinetobacter baumannii (35 mm clear zone). The highest antifungal activity was against Rhizopus stolonifer with a reduction percent in its radial growth reached to 96%. The bacterial MICs ranged from 20 to 0.5 mg/mL against Escherichia coli and Bacillus subtilis respectively. The MIC values for fungi were between 18 mg/mL (Mucor sp.) and 4 mg/mL (R. stolonifer). Both type and concentration of the solvent greatly affected the antimicrobial potentials of E. camaldulensis. The empty capsule and bud of E. camaldulensis are recognized for the first time as potentially natural resources of effective antimicrobial agents.

[DNA barcoding identification of Dendrobium huoshanense and its adulterants].

This research preliminarily discusses the relations of Dendrobium system growth through chloroplast gene rbcL, matK and the nuclear genome ITS2. The DNA barcoding universal sequence for authentication of the Dendrobium medical plants was slected and the possibility concerning utilizing the DNA barcoding to distinguish the D. huoshanenseand its adulterants was analyzed. Using the universal primer pair of ITS2, rbcL and matK, series of extended sequencing in the Dendrobium were conducted. Meanwhile, considering the different index about amplification and sequencing success rate of each sequence, the intraspecific and interspecific aberrance, the employment of BioEdit and MEGA 5.0 software were applied to establish the systematic tree of the NJ molecular and evaluate the diversified authentication capability of various sequences. The consequence demonstrates that the sequence of ITS2 is not only the largest one both in the intraspecific and interspecific aberrance of the Dendrobium but also has obvious barcoding gap. Considering the few overlap between the intraspecific and interspecific aberrance and the highest percentage regarding the formation of unilateral branch in diverse Dendrobium which have different ITS2 sequences, it can differentiate the species of Dendrobium. Furthermore, due to the inferior success rate of the rbcL and thematK and the lower reliability of NJ systematic tree, the percentage of the unilateral species which are generated by the systematic tree of rbcL and matK sequences is deficient. Therefore, the sequence of ITS2 can serves as DNA barcoding to distinguish the D. huoshanense, the D. moniliform and the D. officinale.

[Spatial-temporal variation in population structure of Antarctic krill (Euphausia superba)in the Scotia Sea, Antarctic in 2016.] / 2016年南极斯科舍海南极大磷虾种群结构的时空变化.

The Scotia Sea occupies the highest density of Antarctic krill (Euphausia superba), which is the traditional fishing ground of krill fishery. However, the population structure of krill differed significantly inter-annually, seasonally and regionally. In order to understand the population dynamics of krill in this region, we analyzed the spatial-temporal variation on population structure of krill using samples collected randomly from fishery survey during January to September 2016. The results showed that sex ratio presented remarkably difference among different months. Females dominated in the population from January to May, but the opposite result occurred from June to September. During the survey period (January to September), juveniles only presented in the January popu-lation, and the percentage of adult females was over 40% and similar to that in February. The proportion of sub-adult females were over 50%, but the proportion of female adults were decreased gradually from March to May. The sub-adult males predominated in the population from June to August. The proportion of sub-adult females increased significantly but the number of male adults decreased in September. Sub-adult females occupied half of population in the Bransfield Strait from February to May. The proportion of spent females (25.6%) was higher than those of individuals with other sexual maturity stages and the gravid females occupied higher percentage of population off northeastern waters of the King George Island in January. From June to September, about half of the population was mature males, but the proportion of mature females was very low off northeastern waters of the South Georgia Island. Maturity stage composition indicated that peak spawning occurred in January and February and that spawning grounds occurred off northeastern waters of the King George Island and in the Bransfield Strait.

[Stock assessment methods on marine crustacean species: A review.] / æµ·æ´‹ç”²å£³ç±»ç”Ÿç‰©èµ„æºè¯„ä¼°æ–¹æ³•ç ”ç©¶è¿›å±•.

Crustaceans, such as crab, lobster, prawn, and Antarctic krill, have formed a vast and commercially valuable fishery globally. Although the importance and scale of these crustacean fishe-ries are increasing, the suitable and effective methods for stock assessment and management of crustacean fisheries are urgent to be improved compared to other fisheries. We reviewed and evaluated four kinds of stock assessment methods for assessing crustacean fishery, including the surplus production model, delay-difference model, the depletion model, and size-structured model. We described the application of those models in stock assessment of crustacean fishery, and briefly summarized the assumptions and data needed in these models. We further compared the advantages and disadvantages of those models. In addition, the assumptions of the models, the estimation method of the parameters, and the general solution of uncertainty were analyzed. Finally, the future direction and prospect of crustacean stock assessment were discussed.

[Analysis of influence on spatial distribution of fishing ground for Antarctic krill fishery in the northern South Shetland Islands based on GWR model]. / åŸºäºŽåœ°ç†åŠ æƒæ¨¡åž‹çš„å—è®¾å¾—å °ç¾¤å²›åŒ—éƒ¨å—æžç£·è™¾æ¸”åœºç©ºé—´åˆ†å¸ƒå½±å“åˆ†æž.

Based on Antarctic krill fishery and marine environmental data collected by scientific observers, using geographically weighted regression (GWR) model, we analyzed the effects of the factors with spatial attributes, i.e., depth of krill swarm (DKS) and distance from fishing position to shore (DTS), and sea surface temperature (SST), on the spatial distribution of fishing ground in the northern South Shetland Islands. The results showed that there was no significant aggregation in spatial distribution of catch per unit fishing effort (CPUE). Spatial autocorrelations (positive) among three factors were observed in 2010 and 2013, but were not in 2012 and 2016. Results from GWR model showed that the extent for the impacts on spatial distribution of CPUEs varied among those three factors, following the order DKS>SST>DTS. Compared to the DKS and DTS, the impact of SST on the spatial distribution of CPUEs presented adverse trend in the eastern and western parts of the South Shetland Islands. Negative correlations occurred for the spatial effects of DKS and DTS on distribution of CPUEs, though with inter-annual and regional variation. Our results provide metho-dological reference for researches on the underlying mechanism for fishing ground formation for Antarctic krill fishery.

Biochemical Characterization and Complete Conversion of Coenzyme Specificity of Isocitrate Dehydrogenase from Bifidobacterium longum.

Bifidobacterium longum is a very important gram-positive non-pathogenic bacterium in the human gastrointestinal tract for keeping the digestive and immune system healthy. Isocitrate dehydrogenase (IDH) from B. longum (BlIDH), a novel member in Type II subfamily, was overexpressed, purified and biochemically characterized in detail. The active form of BlIDH was an 83-kDa homodimer. Kinetic analysis showed BlIDH was a NADP⁺-dependent IDH (NADP-IDH), with a 567- and 193-fold preference for NADP⁺ over NAD⁺ in the presence of Mg(2+) and Mn(2+), respectively. The maximal activity for BlIDH occurred at 60 °C (with Mn(2+)) and 65 °C (with Mg(2+)), and pH 7.5 (with Mn(2+)) and pH 8.0 (with Mg(2+)). Heat-inactivation profiles revealed that BlIDH retained 50% of maximal activity after incubation at 45 °C for 20 min with either Mn(2+) or Mg(2+). Furthermore, the coenzyme specificity of BlIDH can be completely reversed from NADP⁺ to NAD⁺ by a factor of 2387 by replacing six residues. This current work, the first report on the coenzyme specificity conversion of Type II NADP-IDHs, would provide better insight into the evolution of NADP⁺ use by the IDH family.

[Spatial point patterns of Antarctic krill fishery in the northern Antarctic Peninsula]. / å—æžåŠå²›åŒ—éƒ¨å—æžç£·è™¾æ¸”ä¸šç©ºé—´ç‚¹æ ¼å±€ç‰¹å¾.

As a key species in the Antarctic ecosystem, the spatial distribution of Antarctic krill (thereafter krill) often tends to present aggregation characteristics, which therefore reflects the spatial patterns of krill fishing operation. Based on the fishing data collected from Chinese krill fishing vessels, of which vessel A was professional krill fishing vessel and Vessel B was a fishing vessel which shifted between Chilean jack mackerel (Trachurus murphyi) fishing ground and krill fishing ground. In order to explore the characteristics of spatial distribution pattern and their ecological effects of two obvious different fishing fleets under a high and low nominal catch per unit effort (CPUE), from the viewpoint of spatial point pattern, the present study analyzed the spatial distribution characteristics of krill fishery in the northern Antarctic Peninsula from three aspects: (1) the two vessels' point pattern characteristics of higher CPUEs and lower CPUEs at different scales; (2) correlation of the bivariate point patterns between these points of higher CPUE and lower CPUE; and (3) correlation patterns of CPUE. Under the analysis derived from the Ripley's L function and mark correlation function, the results showed that the point patterns of the higher/lo-wer catch available were similar, both showing an aggregation distribution in this study windows at all scale levels. The aggregation intensity of krill fishing was nearly maximum at 15 km spatial scale, and kept stably higher values at the scale of 15-50 km. The aggregation intensity of krill fishery point patterns could be described in order as higher CPUE of vessel A > lower CPUE of vessel B >higher CPUE of vessel B > higher CPUE of vessel B. The relationship of the higher and lo-wer CPUEs of vessel A showed positive correlation at the spatial scale of 0-75 km, and presented stochastic relationship after 75 km scale, whereas vessel B showed positive correlation at all spatial scales. The point events of higher and lower CPUEs were synchronized, showing significant correlations at most of spatial scales because of the dynamics nature and complex of krill aggregation patterns. The distribution of vessel A's CPUEs was positively correlated at scales of 0-44 km, but negatively correlated at the scales of 44-80 km. The distribution of vessel B's CPUEs was negatively correlated at the scales of 50-70 km, but no significant correlations were found at other scales. The CPUE mark point patterns showed a negative correlation, which indicated that intraspecific competition for space and prey was significant. There were significant differences in spatial point pattern distribution between vessel A with higher fishing capacity and vessel B with lower fishing capacity. The results showed that the professional krill fishing vessel is suitable to conduct the analysis of spatial point pattern and scientific fishery survey.