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1.
J Chem Inf Model ; 64(11): 4462-4474, 2024 Jun 10.
Artigo em Inglês | MEDLINE | ID: mdl-38776464

RESUMO

The (S)-norcoclaurine synthase from Thalictrum flavum (TfNCS) stereoselectively catalyzes the Pictet-Spengler reaction between dopamine and 4-hydroxyphenylacetaldehyde to give (S)-norcoclaurine. TfNCS can catalyze the Pictet-Spengler reaction with various aldehydes and ketones, leading to diverse tetrahydroisoquinolines. This substrate promiscuity positions TfNCS as a highly promising enzyme for synthesizing fine chemicals. Understanding carbonyl-containing substrates' structural and electronic signatures that influence TfNCS activity can help expand its applications in the synthesis of different compounds and aid in protein optimization strategies. In this study, we investigated the influence of the molecular properties of aldehydes and ketones on their reactivity in the TfNCS-catalyzed Pictet-Spengler reaction. Initially, we compiled a library of reactive and unreactive compounds from previous publications. We also performed enzymatic assays using nuclear magnetic resonance to identify some reactive and unreactive carbonyl compounds, which were then included in the library. Subsequently, we employed QSAR and DFT calculations to establish correlations between substrate-candidate structures and reactivity. Our findings highlight correlations of structural and stereoelectronic features, including the electrophilicity of the carbonyl group, to the reactivity of aldehydes and ketones toward the TfNCS-catalyzed Pictet-Spengler reaction. Interestingly, experimental data of seven compounds out of fifty-three did not correlate with the electrophilicity of the carbonyl group. For these seven compounds, we identified unfavorable interactions between them and the TfNCS. Our results demonstrate the applications of in silico techniques in understanding enzyme promiscuity and specificity, with a particular emphasis on machine learning methodologies, DFT electronic structure calculations, and molecular dynamic (MD) simulations.


Assuntos
Aldeídos , Cetonas , Aldeídos/química , Aldeídos/metabolismo , Cetonas/química , Cetonas/metabolismo , Especificidade por Substrato , Carbono-Nitrogênio Ligases/metabolismo , Carbono-Nitrogênio Ligases/química , Thalictrum/enzimologia , Thalictrum/metabolismo , Thalictrum/química , Simulação de Dinâmica Molecular , Biocatálise
2.
Bioorg Med Chem ; 67: 116815, 2022 08 01.
Artigo em Inglês | MEDLINE | ID: mdl-35598527

RESUMO

Butenolides and tetronic acids occupy a prominent position in synthetic chemistry due to their ubiquitous distribution in nature. This has stimulated investigations firstly in the synthesis of such systems and, laterly, the interest has turned to the understanding of the quantum structure of such systems, allowing a deeper understanding of the mechanism and reactivity of this cyclic scaffold. In contrast, tetronamides, which consist of compounds bearing a 4-aminofuran-2(5H)-one backbone, are relatively rare in nature and synthetic routes to such compounds are poorly explored. This review highlights both the importance of the tetronamide scaffold in medicinal chemistry and the most relevant recondite synthetic strategies for obtaining compounds of this class.


Assuntos
Agroquímicos , Química Farmacêutica
3.
Beilstein J Org Chem ; 17: 1849-1938, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34386103

RESUMO

Several valuable biologically active molecules can be obtained through C-H activation processes. However, the use of expensive and not readily accessible catalysts complicates the process of pharmacological application of these compounds. A plausible way to overcome this issue is developing and using cheaper, more accessible, and equally effective catalysts. First-row transition (3d) metals have shown to be important catalysts in this matter. This review summarizes the use of 3d metal catalysts in C-H activation processes to obtain potentially (or proved) biologically active compounds.

4.
Biotechnol Adv ; 33(5): 372-93, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25795055

RESUMO

Dynamic kinetic resolutions have proven to be a useful method for the preparation of enantiopure compounds from racemates, leading to the formation of a single enantiomer in theoretically 100% yield. Because lipases are ubiquitous, versatile, stereoselective and robust biocatalysts, they have been successfully applied as co-catalysts in these reactions, being mostly combined with metals in the chemoenzymatic dynamic kinetic resolutions of alcohols and amines.


Assuntos
Lipase , Biocatálise , Biotecnologia , Cinética , Estereoisomerismo
5.
Org Biomol Chem ; 11(20): 3332-6, 2013 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-23558581

RESUMO

The synthesis of chiral amines is still a challenge for organic synthesis since optically pure amines are of great importance for the pharmaceutical and agrochemical industries. Among all the methodologies developed until now, chemoenzymatic dynamic kinetic resolution has proven to be useful for the preparation of enantioenriched primary chiral amines. In our continuous efforts toward the development of a continuous flow process, herein we report our results on the continuous flow kinetic resolution of (±)-1-phenylethylamine leading to the desired products with high enantiomeric ratios (>200) and short residence times (40 minutes) using ethyl acetate as the acyl donor.


Assuntos
Acetatos/metabolismo , Lipase/metabolismo , Fenetilaminas/metabolismo , Acetatos/química , Biocatálise , Cinética , Estrutura Molecular , Fenetilaminas/química
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