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1.
Ecol Evol ; 14(10): e70333, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39385841

RESUMO

Many social insect species build nests, which differ from the surrounding environment and are often occupied by specific organismal communities. These organisms may interact mutualistically or parasitically with the nest-builders, or simply co-occur, being able to survive in these microenvironments. In temperate forests, red wood ants (e.g. Formica polyctena) are known to create distinct, highly developed nests, which consist of large, above-ground mounds, built primarily out of plant matter collected from the forest litter. The microorganismal communities of such mounds remain understudied. As representatives of Mucoromycota fungi commonly engage in the decomposition process of the forest litter, they would be expected to occur in the mounds. However, it is still not known whether the Mucoromycota community of these ants' nests differ from the one of the surrounding forest litter. In order to distinguish mound-associated taxa, we characterized Mucoromycota communities of Formica polyctena mounds and the surrounding forest litter. We sampled four sites, twice in a season. Sampled material was plated on agar media and emerging Mucoromycota colonies were identified based on their morphology. Fungal identification was further confirmed using DNA barcoding. In order to compare described communities, PERMANOVA test and non-metric multidimensional scaling ordinations were used. To distinguish taxa associated with the mounds, multilevel pattern analysis was performed. Our results show that the Mucoromycota community of Formica polyctena's mound differs from the community of the surrounding forest litter. While representatives of Entomortierella lignicola and Absidia cylindrospora clade were found to be associated with the mound environment, representatives of Umbelopsis curvata and Podila verticillata-humilis clade were associated with forest litter, and were rarely present in the mounds. Our findings strongly suggest that the red wood ants' nest is a specific microenvironment in the temperate forest floor, which is a preferred microhabitat for the mound-associated Mucoromycota, possibly adapted to live in proximity to ants.

2.
Ann Bot ; 2024 Oct 08.
Artigo em Inglês | MEDLINE | ID: mdl-39377181

RESUMO

BACKGROUND AND AIMS: There is ongoing debate about whether offspring perform best next to phylogenetically distantly related adult neighbours (due to the scarcity of enemies and competitors) or next to closely related adults (due to the abundance of mutualists). Here we hypothesise that relatedness of adult neighbours affects which traits confer performance rather than performance itself. METHODS: We studied seed removal, seed germination and sapling growth in Sessile Oaks (Quercus petraea and hybrids), and how they depend on size, shape and other traits, under both closely and distantly related canopies, manipulating offspring-density, presence of insects, and fungi, and spatial proximity to oaks. KEY RESULTS: We found that phylogenetic distance of adult neighbours affects only little performance of offspring but strongly which traits confer performance to offspring, in particular the size and shape of seeds and saplings. Differences in trait-performance relationships mostly disappear once insects or conspecific competitors are excluded (albeit exclusion of fungi reinforced these differences). Effects of phylogenetic distance of neighbours were not replaceable by the percentage of the gymnosperms among neighbours, nor the environmental conditions considered. CONCLUSIONS: We suggest that by responding to a biotic micro-mosaic of selection pressures, Sessile Oak flexibly succeeds in diverse neighbourhoods. Sessile Oak might maintain the potential for both, convergence with and divergence from phylogenetically distantly related species, thereby reinforcing or eroding phylogenetic signal of niches.

3.
Conserv Biol ; : e14370, 2024 Sep 03.
Artigo em Inglês | MEDLINE | ID: mdl-39225270

RESUMO

Expert judgment underpins assessment of threatened ecosystems. However, experts are often narrowly defined, and variability in their judgments may be substantial. Models built from structured elicitation with large diverse expert panels can contribute to more consistent and transparent decision-making. We conducted a structured elicitation under a broad definition of expertise to examine variation in judgments of ecosystem viability and collapse in a critically endangered ecosystem. We explored whether variation in judgments among 83 experts was related to affiliation and management expertise and assessed performance of an average model based on common ecosystem indicators. There were systematic differences among individuals, much of which were not explained by affiliation or expertise. However, of the individuals affiliated with government, those in conservation and environmental departments were more likely to determine a patch was viable than those in agriculture and rural land management. Classification errors from an average model, in which all individuals were weighted equally, were highest among government agriculture experts (27%) and lowest among government conservation experts (12%). Differences were mostly cases in which the average model predicted a patch was viable but the individual thought it was not. These differences arose primarily for areas that were grazed or cleared of mature trees. These areas are often the target of restoration, but they are also valuable for agriculture. These results highlight the potential for conflicting advice and disagreement about policies and actions for conserving and restoring threatened ecosystems. Although adoption of an average model can improve consistency of ecosystem assessment, it can fail to capture and convey diverse opinions held by experts. Structured elicitation and models of ecosystem viability play an important role in providing data-driven evidence of where differences arise among experts to support engagement and discussion among stakeholders and decision makers and to improve the management of threatened ecosystems.


Análisis de los modelos de opiniones de expertos para informar la evaluación de la viabilidad y el colapso ambiental Resumen La evaluación de los ecosistemas amenazados se basa en la opinión de los expertos. Sin embargo, la definición de experto suele ser limitada y la variabilidad de sus juicios puede ser considerable. Los modelos elaborados a partir de consultas estructuradas con grupos de expertos amplios y diversos pueden contribuir a una toma de decisiones más coherente y transparente. Realizamos una consulta estructurada con una definición amplia de experto para analizar la variación en los juicios sobre la viabilidad y el colapso de un ecosistema en peligro crítico. Exploramos si la variación en los juicios entre 83 expertos estaba relacionada con la afiliación y la experiencia en gestión y evaluamos el rendimiento de un modelo medio basado en indicadores comunes del ecosistema. Observamos diferencias sistemáticas entre los expertos, gran parte de las cuales no se explicaban por la afiliación o la experiencia. Sin embargo, entre los expertos vinculados a la administración pública, los de los departamentos de conservación y medio ambiente tenían más probabilidades de determinar que una parcela era viable que los de agricultura y gestión de tierras rurales. Los errores de clasificación de un modelo medio con todos los individuos ponderados por igual, fueron mayores entre los expertos gubernamentales en agricultura (27%) y menores entre los expertos gubernamentales en conservación (12%). En la mayoría de los casos, las diferencias se debían a que el modelo medio predecía que una parcela era viable, pero el individuo pensaba que no lo era. Estas diferencias surgieron sobre todo en zonas que habían sido pastoreadas o con una tala total de árboles maduros. Estas zonas suelen ser objeto de restauración, pero también son valiosas para la agricultura. Estos resultados ponen de manifiesto la posibilidad de que se produzcan consejos contradictorios y desacuerdos sobre las políticas y acciones de conservación y restauración de los ecosistemas pastoreados y forestales. Si bien la adopción de un modelo medio puede mejorar la coherencia de la evaluación de los ecosistemas, también puede fallar a la hora de captar y transmitir las diversas opiniones de los expertos. Las consultas estructuradas y los modelos de viabilidad de los ecosistemas desempeñan un papel importante a la hora de aportar pruebas basadas en datos de dónde surgen las diferencias entre los expertos para apoyar el compromiso y el debate entre las partes interesadas y los responsables de la toma de decisiones, así como para mejorar la gestión de los ecosistemas amenazados.

4.
Sci Rep ; 14(1): 21211, 2024 09 11.
Artigo em Inglês | MEDLINE | ID: mdl-39261589

RESUMO

This study aimed to investigate whether heat stress, as defined by the temperature-humidity index (THI) during the close-up dry period, had any impact on the productive performance, fertility, and immunometabolic blood indices of dairy cows in the subsequent lactation. Lactation performance was associated with increasing THI values on - 21, - 14, and - 7 d before calving resulting in decreased milk yield by about 2.30, 2.60, and 2.90 kg, respectively. The THI on the - 7 d before the calving was negatively associated with fertility parameters such as delayed first estrus postpartum, an elongated calving interval by approximately 32 d, a higher number of services per conception by 1.00, and an elongated artificial insemination service period, days open, and inter-calving period by about 20, 52, and 52 d, respectively. The study found that the immunometabolic blood indices were associated with increasing THI values during the close-up dry period. The study showed that exposing dairy cows to close-up dry period heat stress had negative consequences on performance, fertility, and immunometabolic blood indices in the subsequent lactation. Therefore, it is recommended that herd management and barn microclimate changes be implemented earlier, starting from the late dry period, to mitigate the negative impact of heat stress.


Assuntos
Fertilidade , Resposta ao Choque Térmico , Lactação , Animais , Bovinos , Feminino , Fertilidade/fisiologia , Lactação/fisiologia , Estudos Prospectivos , Indústria de Laticínios , Transtornos de Estresse por Calor/veterinária , Transtornos de Estresse por Calor/sangue , Umidade , Gravidez
5.
Sci Rep ; 14(1): 21600, 2024 09 16.
Artigo em Inglês | MEDLINE | ID: mdl-39284845

RESUMO

Understanding how large carnivores utilize space is crucial for management planning in human-dominated landscape and enhances the accuracy of population size estimates. However, Eurasian lynx display a large inter-population variation in the size of home ranges across their European range which makes extrapolation to broader areas of a species distribution problematic. This study evaluates variations in home range size for 35 Eurasian lynx in the Western Carpathians during 2011-2022 based on GPS telemetry and explains how intrinsic and environmental factors shape lynx spatial behaviour when facing anthropogenic pressure. The average annual home range size of lynx ranged from 283 (± 42 SE) to 360 (± 60 SE) km2 for males and from 148 (± 50 SE) to 190 (± 70 SE) km2 for females, depending on home range estimator (95% MCP, KDE and AKDE). Females with kittens had smaller annual and summer home ranges compared to non-reproducing females and subadults had smaller home ranges compared to adults. Lynx home range size was explained by availability of roe deer, except for summer, when alternative prey was likely available. We also found clear evidence of human-induced changes in lynx home range size, in particular, forest cover significantly decreased the home range size of male lynx during summer while road density led to an expansion of both annual and summer lynx home ranges. Lynx exhibited consistent fidelity to their home ranges throughout consecutive seasons, showing no seasonal variations. Strong territoriality was observed among competing males maintaining relatively low home range overlaps and considerable distances between centres of activity. The most pronounced tendency for association was observed between males and females, maintaining relatively close proximity year-round. The insights into lynx spatial requirements provided by our study will greatly enhance the accuracy of population size estimates and effectiveness of mitigation measures across the Western Carpathians.


Assuntos
Comportamento de Retorno ao Território Vital , Lynx , Animais , Lynx/fisiologia , Feminino , Masculino , Comportamento de Retorno ao Território Vital/fisiologia , Ecossistema , Estações do Ano , Densidade Demográfica
6.
Oecologia ; 2024 Sep 08.
Artigo em Inglês | MEDLINE | ID: mdl-39245757

RESUMO

Increasing atmospheric CO2 levels change the elemental composition in plants, altering their nutritional quality and affecting consumers and ecosystems. Ecological stoichiometry provides a framework for investigating how CO2-driven nutrient dilution in pollen affects bees by linking changes in pollen chemical element proportions to the nutritional needs of bees. We investigated the consequences of five years of Free Air CO2 Enrichment (FACE) in a mature oak-dominated temperate forest on the elemental composition of English oak (Quercus robur) pollen. We measured the concentrations and proportions of 12 elements (C, N, P, S, K, Na, Ca, Mg, Cu, Zn, Fe, and Mn) in Q. robur pollen-bearing flowers collected from the Birmingham Institute for Forest Research (BIFoR) FACE facility. An elevated CO2 (eCO2) level of 150 ppm above ambient significantly reduced the S, K, and Fe levels and altered the multi-element ratio, with different elements behaving differently. This shift in pollen multi-element composition may have subsequent cascading effects on higher trophic levels. To assess the impact on bees, we calculated the stoichiometric mismatch (a measure of the discrepancy between consumer needs and food quality) for two bee species, Osmia bicornis (red mason bee) and Apis mellifera (honey bee), that consume oak pollen in nature. We observed stoichiometric mismatches for P and S, in pollen under eCO2, which could negatively affect bees. We highlight the need for a comprehensive understanding of the changes in pollen multi-element stoichiometry under eCO2, which leads to nutrient limitations under climate change with consequences for bees.

7.
Harmful Algae ; 138: 102698, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-39244233

RESUMO

Marine phytoplankton communities are pivotal in biogeochemical cycles and impact global climate change. However, the dynamics of the dinoflagellate community, its co-occurrence relationship with other eukaryotic plankton communities, and environmental factors remain poorly understood. In this study, we aimed to analyze the temporal changes in the eukaryotic plankton community using a 18S rDNA metabarcoding approach. We performed intensive monitoring for 439 days at intervals of three days during the period from November 2018 to June 2020 (n = 260) in Jangmok Bay Time-series Monitoring Site in South Korea. Among the 16,224 amplicon sequence variants (ASVs) obtained, dinoflagellates were the most abundant in the plankton community (38 % of total relative abundance). The dinoflagellate community was divided into 21 groups via cluster analysis, which showed an annually similar distribution of low-temperature periods. Additionally, we selected 11 taxa that had an occurrence mean exceeding 1 % of the total dinoflagellate abundance, accounting for 93 % of the total dinoflagellate community: namely Heterocapsa rotundata, Gymnodinium sp., Akashiwo sanguinea, Amoebophrya sp., Euduboscquella sp., Spiniferites ramosus, Dissodinium pseudolunula, Sinophysis sp., Karlodinium veneficum, and Katodinium glaucum. The key dinoflagellate species were well represented at temporally variable levels over an entire year. Heterocapsa rotundata was not significantly affected by water temperature, whereas its dynamics were largely influenced by strong predation pressure, competition, and/or the supplementation of food sources. The growth of A. sanguinea was associated with dissolved inorganic phosphorus concentrations, while Euduboscquella sp. showed a significant relationship with D. pseudolunula and K. glaucum, largely representing a positive association that implies possible parasitic mechanisms. This study demonstrated interactions between key dinoflagellate species and the environment, as well as parasites, predators, competitors, and feeders.


Assuntos
Código de Barras de DNA Taxonômico , Dinoflagellida , Dinoflagellida/genética , Dinoflagellida/fisiologia , Dinoflagellida/classificação , República da Coreia , Código de Barras de DNA Taxonômico/métodos , Ecossistema , Fitoplâncton/genética , Fitoplâncton/fisiologia , RNA Ribossômico 18S/análise , RNA Ribossômico 18S/genética
8.
J Virol ; : e0182123, 2024 Sep 12.
Artigo em Inglês | MEDLINE | ID: mdl-39264154

RESUMO

Bacteriophage (phage) studies established the field of molecular biology and continue to propel life science research forward due to their diversity, abundance, and potential applications. In this Gem article, we orient newcomers to four common ways phages are currently classified: infection cycle, morphology, taxonomy, and supergroup. By using these classifications, researchers can determine where any novel phage fits into the scheme of the known "phage-verse".

9.
Front Microbiol ; 15: 1455891, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39345260

RESUMO

Although aboveground biodiversity has been extensively studied, the impact of nutrient enrichment on soil microbial populations remains unclear. Soil microorganisms serve as important indicators in shaping soil nutrient cycling processes and are typically sensitive to nutrient additions. For this, we employed a factorial combination design to examine the impact of nutrient additions on the composition and function of soil bacteria in a temperate steppe. Nitrogen addition promoted the growth of copiotrophic bacteria (Proteobacteria, Firmicutes, and Bacteroidota) but inhibited the growth of oligotrophic bacteria (Acidobacteria, Chloroflexi, and Verrucomicrobiota). Phosphorus addition alleviated phosphorus deficiency, resulting in a decrease in the abundance of phoD-harboring bacteria (Actinobacteria and Proteobacteria). Significant enhancement of soil bacterial alpha diversity was observed only in treatments with added phosphorus. Changes in NO3 --N, NH4 +-N, available phosphorus, and dissolved organic carbon resulting from nutrient addition may have a greater impact on microbial community structure than changes in soil pH caused by nitrogen addition. Moreover, nutrient addition may indirectly impact microbial ecological function by altering nutrient availability in the soil. In conclusion, our study suggests that soil nutrient availability, particularly available phosphorus, affects soil bacterial communities and potentially regulates the biogeochemical cycles of soil ecosystems.

10.
Insects ; 15(9)2024 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-39336664

RESUMO

This study aimed to analyze the population dynamics of the mite Varroa destructor in honey bee (Apis mellifera) colonies in a temperate semi-arid climate in Mexico. Ten colonies homogeneous in population, food stores, and levels of mite infestation were used. The mite infestation rate in brood and adult bees, total number of mites, daily mite fall, brood and adult bee population, and food stores were determined periodically for 10 months. There was a significant effect (p < 0.05) of sampling period on the population of V. destructor in adult bees, brood, total mite population, and daily fallen mites. The total mite population increased by 26% on average per colony. The increase in brood amount reduced the mite infestation rate in adult bees, and the opposite occurred when the brood decreased. Monitoring V. destructor populations by recording fallen mites is more reliable than determining mite infestation rates in bees, as mite fall has a dynamic pattern similar to that of the total mite population. The best period to apply an acaricide treatment in the region of study is between November and December because most mites were in the phoretic phase, since there was less brood in the colonies compared to other times.

11.
Tree Physiol ; 2024 Sep 08.
Artigo em Inglês | MEDLINE | ID: mdl-39244748

RESUMO

None declared.Conflict of interestIn addition to inducing xylem embolism, freeze-thaw events can cause frost fatigue phenomena. Freezing temperature, freezing times, number of freeze-thaw cycles, and frost drought can affect the level of freeze-thaw-induced embolism, but it is unknown whether there is an effect on frost fatigue. We assessed whether these frost-related factors changed frost fatigue in the three diffuse-porous species by simulating freeze-thaw treatments under different conditions. We also proposed a new metric, embolism area, in place of embolism resistance, to more accurately quantify the shift of the vulnerability curve after experiencing freeze-thaw-induced embolism and refilling. Frost fatigue caused VCs of all species to change from S-shaped to double S-shaped or even R-shaped curves. When exposed to a freeze-thaw event, Acer truncatum showed strong resistance to frost fatigue, in contrast, Populus (I-101 × 84 K) and Liriodendron chinense were more vulnerable. Changing freezing temperature and times did not impact the response to frost fatigue in the three species, but a greater number of freeze-thaw cycles and more severe frost drought significantly exacerbated their fatigue degree. Considering that frost fatigue may be a widespread phenomenon among temperate diffuse-porous species, more work is needed in the future to reveal the mechanisms of frost fatigue.

12.
Huan Jing Ke Xue ; 45(9): 5431-5440, 2024 Sep 08.
Artigo em Chinês | MEDLINE | ID: mdl-39323160

RESUMO

Soil aggregate stability and organic carbon (SOC) are important indicators of soil structure and quality and play a key role in the improvement of soil quality in temperate deserts. This study aimed to investigate the distribution patterns, stability of soil aggregates, and variation characteristics of the content of aggregate organic carbon in different grassland types in temperate deserts and their interrelationships. Four grassland types in a temperate desert (Kalidium foliatum type, Reaumuria songarica type, Salsola passerina type, and Sympegma regelii type) in the Longzhong Loess Plateau as research objects, and the soil aggregate particle size distribution characteristics were determined using the wet sieving method. The stability of soil aggregates was analyzed by calculating aggregate stability indicators and the contribution of aggregate particle size SOC to bulk soil SOC content. Correlation analysis, principal component analysis, and linear fitting equations were used to reveal the relationship between the soil aggregate content and aggregate particle size SOC and aggregate stability. The results showed that the content of >0.25 mm aggregates (R0.25), mean weight diameter (MWD), geometric mean diameter (GMD), and bulk soil SOC content in each soil layer (0-10, 10-20, and 20-30 cm) of the K. foliatum type grassland were significantly higher than that of the R. songarica type and S. regelii type (P<0.05). The SOC content of 0.053-0.25 mm and <0.053 mm particle size in each soil layer of the K. foliatum type grassland were significantly higher than that of the S. regelii type (P<0.05). Surface and subsurface soils (0-10 cm and 10-20 cm) had the significantly highest contribution of 0.25-2 mm particle size SOC to the bulk soil SOC content (P<0.05). Additionally, as the soil layer deepened, the R0.25, MWD, GMD, bulk soil, and aggregate SOC contents of the K. foliatum type grassland showed a tendency to increase first and then decrease, with the highest contents from 10-20 cm. Kalidium foliatum type grassland aggregate content was dominated by 0.25-2 mm aggregates, whereas the other three grassland types were dominated by 0.053-0.25 mm aggregates. In addition, bulk soil SOC content was significantly correlated with R0.25, MWD, GMD, and ELT (P<0.01), and the 0.25 mm aggregate was the critical size of positive and negative correlation. R0.25, MWD, GMD, and ELT values were the key factors influencing bulk soil SOC in grassland. The equation fitted to bulk soil SOC content, and GMD was the most suitable to describe the relationship between SOC content and the stability of soil aggregates. Therefore, compared with other grassland types, K. foliatum type grassland had a promoting effect on the soil aggregate stability and the improvement of soil quality.

13.
Sci Total Environ ; 954: 176325, 2024 Sep 16.
Artigo em Inglês | MEDLINE | ID: mdl-39293759

RESUMO

Interactions between multiple global change stressors are a defining characteristic of the Anthropocene. Tree-associated pathogens are affecting forested ecosystems worldwide and occur in the context of increased frequency and intensity of extreme climate events such as heat waves, droughts, and floods. The effects of these events, along with subsequent changes in environmental conditions, on remaining and regenerating trees, are not well understood but crucial for the restoration and conservation of forested habitats. In this study, we investigate ash (Fraxinus excelsior) dieback in a temperate broadleaf woodland as a case study to explore the processes influencing non-infected trees during pathogen-induced mortality events. Utilising an experimental setup, we examine tree growth rates at different chronological stages of the disease, including naturally progressing ash dieback (4-5 years since disease outbreak), accelerated ash dieback where ash trees have been girdled (10-15 years), and negligible ash dieback (<20 % ash trees). During a year with typical climatic conditions (2021), soils in accelerated ash dieback plots remained saturated throughout the summer due to insufficient transpiration (57 % higher in the accelerated dieback plots), suggesting a significantly increased risk of summer run-off and floods. However, tree growth rates in these plots were not affected (t-test, t = -0.3 to 1.2, p > 0.05). Conversely, anomalously dry years, such as the 2022 summer drought, saw higher soil moisture in the accelerated ash dieback plots (t-test, t = 4.8, p < 0.01) acting as a buffer, resulting in normal tree growth during drought compared to greatly reduced growth in plots with weaker dieback. These findings emphasise the complex interactions between extreme climate events and pathogen outbreaks. Better understanding of the relationships between pathogens and hydrology on tree growth is imperative and detailed long-term studies on tree growth and hydrology will facilitate and improve mitigation strategies.

14.
Plant Physiol ; 2024 Sep 24.
Artigo em Inglês | MEDLINE | ID: mdl-39316702

RESUMO

Vernalisation-responsive plants use cold as a cue to monitor the passing of winter. Winter cereals can remember how much cold they have experienced, even when winter is punctuated by warm days. However, in a seemingly unnatural process called 'devernalisation', hot temperatures can erase winter memory. Previous studies in bread wheat (Triticum aestivum) have implicated the MADS-box transcription factor VEGETATIVE TO REPRODUCTIVE TRANSITION 2 (VRT2) in vernalisation based on transcriptional behaviour and ectopic expression. Here, we characterised three BdVRT2 loss-of-function alleles in the temperate model grass Brachypodium distachyon. In addition to extended vernalisation requirements, mutants showed delayed flowering relative to wild-type plants when exposed only briefly to warm temperatures after partial vernalisation, with flowering being unaffected when vernalisation was saturating. Together, these data suggest a role for BdVRT2 in both vernalisation and in its re-initiation when interrupted by warm temperatures. In controlled constant conditions, BdVRT2 transcription was not strongly affected by vernalisation or devernalisation. Yet, by monitoring BdVRT2 expression in seasonally varying and fluctuating conditions in an unheated greenhouse, we observed strong upregulation, suggesting that its transcription is regulated by fluctuating vernalising-devernalising conditions. Our data suggest that devernalisation by hot temperatures is not a peculiarity of domesticated cereal crops but is the extreme of the reversibility of vernalisation by warm temperatures and has broader biological relevance across temperate grasses.

15.
PeerJ ; 12: e17769, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39329142

RESUMO

Leaf litter decomposition, a crucial component of the global carbon cycle, relies on the pivotal role played by microorganisms. However, despite their ecological importance, leaf-litter-decomposing microorganism taxonomic and functional diversity needs additional study. This study explores the taxonomic composition, dynamics, and functional role of microbial communities that decompose leaf litter of forest-forming tree species in two ecologically unique regions of Europe. Twenty-nine microbial metagenomes isolated from the leaf litter of eight forest-forming species of woody plants were investigated by Illumina technology using read- and assembly-based approaches of sequences analysis. The taxonomic structure of the microbial community varies depending on the stage of litter decomposition; however, the community's core is formed by Pseudomonas, Sphingomonas, Stenotrophomonas, and Pedobacter genera of Bacteria and by Aureobasidium, Penicillium, Venturia genera of Fungi. A comparative analysis of the taxonomic structure and composition of the microbial communities revealed that in both regions, seasonal changes in structure take place; however, there is no clear pattern in its dynamics. Functional gene analysis of MAGs revealed numerous metabolic profiles associated with leaf litter degradation. This highlights the diverse metabolic capabilities of microbial communities and their implications for ecosystem processes, including the production of volatile organic compounds (VOCs) during organic matter decomposition. This study provides important advances in understanding of ecosystem processes and the carbon cycle, underscoring the need to unravel the intricacies of microbial communities within these contexts.


Assuntos
Florestas , Microbiota , Folhas de Planta , Estações do Ano , Folhas de Planta/microbiologia , Folhas de Planta/metabolismo , Microbiota/genética , Microbiota/fisiologia , Bactérias/genética , Bactérias/classificação , Bactérias/metabolismo , Fungos/genética , Fungos/classificação , Fungos/metabolismo , Fungos/isolamento & purificação , Sequenciamento Completo do Genoma , Metagenoma/genética , Árvores/microbiologia
16.
Plant Environ Interact ; 5(4): e70002, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-39131952

RESUMO

Arbuscular mycorrhizal fungi (AMF) are widespread obligate symbionts of plants. This dynamic symbiosis plays a large role in successful plant performance, given that AMF help to ameliorate plant responses to abiotic and biotic stressors. Although the importance of this symbiosis is clear, less is known about what may be driving this symbiosis, the plant's need for nutrients or the excess of plant photosynthate being transferred to the AMF, information critical to assess the functionality of this relationship. Characterizing the AMF community along a natural plant productivity gradient is a first step in understanding how this symbiosis may vary across the landscape. We surveyed the AMF community diversity at 12 sites along a plant productivity gradient driven by soil nitrogen availability. We found that AMF diversity in soil environmental DNA significantly increased along with the growth of the host plants Acer rubrum and A. saccharum., a widespread tree genus. These increases also coincided with a natural soil inorganic N availability gradient. We hypothesize photosynthate from the increased tree growth is being allocated to the belowground AMF community, leading to an increase in diversity. These findings contribute to understanding this complex symbiosis through the lens of AMF turnover and suggest that a more diverse AMF community is associated with increased host-plant performance.

17.
New Phytol ; 2024 Aug 22.
Artigo em Inglês | MEDLINE | ID: mdl-39175085

RESUMO

Soil moisture shapes ecological patterns and processes, but it is difficult to continuously measure soil moisture variability across the landscape. To overcome these limitations, soil moisture is often bioindicated using community-weighted means of the Ellenberg indicator values of vascular plant species. However, the ecology and distribution of plant species reflect soil water supply as well as atmospheric water demand. Therefore, we hypothesized that Ellenberg moisture values can also reflect atmospheric water demand expressed as a vapour pressure deficit (VPD). To test this hypothesis, we disentangled the relationships among soil water content, atmospheric vapour pressure deficit, and Ellenberg moisture values in the understory plant communities of temperate broadleaved forests in central Europe. Ellenberg moisture values reflected atmospheric VPD rather than soil water content consistently across local, landscape, and regional spatial scales, regardless of vegetation plot size, depth as well as method of soil moisture measurement. Using in situ microclimate measurements, we discovered that forest plant indicator values for moisture reflect an atmospheric VPD rather than soil water content. Many ecological patterns and processes correlated with Ellenberg moisture values and previously attributed to soil water supply are thus more likely driven by atmospheric water demand.

18.
PhytoKeys ; 246: 1-14, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39183963

RESUMO

A new bamboo species, Yushaniadezhui, from Kunming, Yunnan, China is described and illustrated in this paper. The new species used to be misidentified as Y.polytricha. Based on careful comparison of morphological features and molecular phylogeny evidence, we confirmed its identity as a new member of the genus Yushania. Yushaniadezhui resembles Y.maculata, Y.polytricha and Y.weixiensis in several aspects, such as culm height and branch complement structure. However, the glabrous culm leaf sheaths and internodes, the absence of auricles and oral setae on most foliage leaves, except the one-year-old foliage leaves, the pubescence on the adaxial surface of the one-year-old foliage leaves and its limestone habitat preference can readily distinguish this new species from its related taxa. Moreover, we emphasise that individuals from various populations and molecular markers with different inheritance patterns for phylogeny reconstruction should be included in new species discovery, especially in plant groups with complex evolutionary histories.

19.
Mar Environ Res ; 201: 106703, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39182434

RESUMO

Archaea play a crucial role in the global biogeochemical cycling of elements and nutrients, helping to maintain the functional stability of estuarine systems. This study characterised the abundance and diversity of archaeal communities and identified the environmental conditions shaping these microbial communities within six temperate estuaries along approximately 500 km of the New South Wales coastline, Australia. Estuarine sediments were found to exhibit significantly higher species richness than planktonic communities, with representative sequences from the Crenarchaeota phylum characterising each environment. Ordinate analyses revealed catchment characteristics as the strongest drivers of community variability. Our results also provide evidence supporting distance-decay patterns of archaeal biogeography across intermediate scales within and between temperate estuaries, contributing to a growing body of evidence revealing the extent spatial scales play in shaping microbial communities. This study expands our understanding of microbial diversity in temperate estuaries, with a specific focus on archaeal community structure and their role in maintaining ecosystem stability.


Assuntos
Archaea , Biodiversidade , Estuários , Archaea/genética , New South Wales , Sedimentos Geológicos/microbiologia , Ecossistema , Água do Mar/microbiologia , Água do Mar/química , Filogenia
20.
Sci Total Environ ; 951: 175560, 2024 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-39153618

RESUMO

Understanding of how different grasslands types respond to climate change and human activities across different spatial and temporal dimensions is crucial for devising effective strategies to prevent grasslands degradation. In this study, we developed a novel vulnerability assessment model for grasslands that intricately evaluates the combined impact of climate change and human activities. We then applied this model to analyze the vulnerability and driving mechanism of four representative Chinese grasslands to climate change and human activities. Our findings indicate that the vulnerability of the four grasslands would show a pattern of higher in the west and lower in the east under the influence of climate change alone. However, when human activities are factored in, the vulnerability across the four grasslands tends to homogenize, with human activities notably reducing the vulnerability of alpine grasslands in the west and, conversely, increasing the vulnerability of grasslands in the east. Furthermore, our study reveals distinct major environmental drivers of grasslands vulnerability across different regions. The two western alpine grasslands exhibit higher vulnerability to annual mean temperature and isothermality compared to the eastern temperate grasslands, while their vulnerability to precipitation of the coldest quarter is lower than that of the eastern temperate grasslands. These findings are helpful for understanding the multifaceted causes and mechanisms of grasslands degradation, providing a scientific foundation for the sustainable management and conservation of grassland resources.


Assuntos
Mudança Climática , Pradaria , Atividades Humanas , China , Conservação dos Recursos Naturais , Monitoramento Ambiental , Humanos
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