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1.
Nat Commun ; 11(1): 5574, 2020 11 04.
Artigo em Inglês | MEDLINE | ID: mdl-33149109

RESUMO

Liquid-liquid phase separation (LLPS) of proteins that leads to formation of membrane-less organelles is critical to many biochemical processes in the cell. However, dysregulated LLPS can also facilitate aberrant phase transitions and lead to protein aggregation and disease. Accordingly, there is great interest in identifying small molecules that modulate LLPS. Here, we demonstrate that 4,4'-dianilino-1,1'-binaphthyl-5,5'-disulfonic acid (bis-ANS) and similar compounds are potent biphasic modulators of protein LLPS. Depending on context, bis-ANS can both induce LLPS de novo as well as prevent formation of homotypic liquid droplets. Our study also reveals the mechanisms by which bis-ANS and related compounds modulate LLPS and identify key chemical features of small molecules required for this activity. These findings may provide a foundation for the rational design of small molecule modulators of LLPS with therapeutic value.


Assuntos
Naftalenossulfonato de Anilina/química , Naftalenossulfonato de Anilina/farmacologia , Grânulos Citoplasmáticos/efeitos dos fármacos , Proteínas de Ligação a DNA/química , Transição de Fase , Naftalenossulfonato de Anilina/toxicidade , Grânulos Citoplasmáticos/genética , Grânulos Citoplasmáticos/metabolismo , Citosol/metabolismo , Células HCT116 , Heparina/química , Humanos , Interações Hidrofóbicas e Hidrofílicas , Poli A/química , Domínios Proteicos/genética
2.
PLoS One ; 14(8): e0219130, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31404073

RESUMO

The development of inhibitors of islet amyloid formation is important as pancreatic amyloid deposition contributes to type-2 diabetes and islet transplant failure. The Alzheimer's Aß peptide and human amylin (h-amylin), the polypeptide responsible for amyloid formation in type-2 diabetes, share common physio-chemical features and some inhibitors of Aß also inhibit amyloid formation by h-amylin and vice versa. Thus, a popular and potentially useful strategy to find lead compounds for anti-amylin amyloid agents is to examine compounds that have effects on Aß amyloid formation. The triphenylmethane dye, brilliant blue G (BBG, Sodium;3-[[4-[(E)-[4-(4-ethoxyanilino)phenyl]-[4-[ethyl-[(3-sulfonatophenyl)methyl]azaniumylidene]-2-methylcyclohexa-2,5-dien-1-ylidene]methyl]-N-ethyl-3-methylanilino]methyl]benzenesulfonate) has been shown to modulate Aß amyloid formation and inhibit Aß induced toxicity. However, the effects of BBG on h-amylin have not been examined, although other triphenylmethane derivatives inhibit h-amylin amyloid formation. The compound has only a modest impact on h-amylin amyloid formation unless it is added in significant excess. BBG also remodels preformed h-amylin amyloid fibrils if added in excess, however BBG has no significant effect on h-amylin induced toxicity towards cultured ß-cells or cultured CHO-T cells except at high concentrations. BBG is shown to interfere with standard thioflavin-T assays of h-amylin amyloid formation and disaggregation, highlighting the difficulty of interpreting such experiments in the absence of other measurements. BBG also interferes with ANS based assays of h-amylin amyloid formation. The work highlights the differences between inhibition of Aß and h-amylin amyloid formation, illustrates the limitation of using Aß inhibitors as leads for h-amylin amyloid inhibitors, and reinforces the difficulties in interpreting dye binding assays of amyloid formation.


Assuntos
Agonistas dos Receptores da Amilina/farmacologia , Amiloide/antagonistas & inibidores , Bioensaio/normas , Desenho de Fármacos , Polipeptídeo Amiloide das Ilhotas Pancreáticas/farmacologia , Corantes de Rosanilina/farmacologia , Compostos de Tritil/farmacologia , Amiloide/metabolismo , Naftalenossulfonato de Anilina/farmacologia , Benzotiazóis/farmacologia , Corantes Fluorescentes/farmacologia , Humanos , Indicadores e Reagentes/farmacologia
3.
FASEB J ; 33(9): 10065-10076, 2019 09.
Artigo em Inglês | MEDLINE | ID: mdl-31226003

RESUMO

The adenylate cyclase (CyaA) toxin is a major virulence factor of Bordetella pertussis, the causative agent of whooping cough. CyaA is synthetized as a pro-toxin, pro-CyaA, and converted into its cytotoxic form upon acylation of two lysines. After secretion, CyaA invades eukaryotic cells and produces cAMP, leading to host defense subversion. To gain further insights into the effect of acylation, we compared the functional and structural properties of pro-CyaA and CyaA proteins. HDX-MS results show that the refolding process of both proteins upon progressive urea removal is initiated by calcium binding to the C-terminal RTX domain. We further identified a critical hydrophobic segment, distal from the acylation region, that folds at higher urea concentration in CyaA than in pro-CyaA. Once refolded into monomers, CyaA is more compact and stable than pro-CyaA, due to a complex set of interactions between domains. Our HDX-MS data provide direct evidence that the presence of acyl chains in CyaA induces a significant stabilization of the apolar segments of the hydrophobic domain and of most of the acylation region. We propose a refolding model dependent on calcium and driven by local and distal acylation-dependent interactions within CyaA. Therefore, CyaA acylation is not only critical for cell intoxication, but also for protein refolding into its active conformation. Our data shed light on the complex relationship between post-translational modifications, structural disorder and protein folding. Coupling calcium-binding and acylation-driven folding is likely pertinent for other repeat-in-toxin cytolysins produced by many Gram-negative bacterial pathogens.-O'Brien, D. P., Cannella, S. E., Voegele, A., Raoux-Barbot, D., Davi, M., Douché, T., Matondo, M., Brier, S., Ladant, D., Chenal, A. Post-translational acylation controls the folding and functions of the CyaA RTX toxin.


Assuntos
Toxina Adenilato Ciclase/química , Bordetella pertussis/metabolismo , Processamento de Proteína Pós-Traducional , Acilação , Toxina Adenilato Ciclase/metabolismo , Sequência de Aminoácidos , Naftalenossulfonato de Anilina/farmacologia , Animais , Bordetella pertussis/genética , Eritrócitos/efeitos dos fármacos , Interações Hidrofóbicas e Hidrofílicas , Lisina/química , Conformação Proteica , Domínios Proteicos , Dobramento de Proteína , Estabilidade Proteica , Proteínas Recombinantes/química , Ovinos , Relação Estrutura-Atividade , Espectrometria de Massas em Tandem , Ureia
4.
Int J Biol Macromol ; 122: 636-643, 2019 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-30391427

RESUMO

The exposed hydrophobic patches of protein are widely detected through the binding by the fluorescent probes such as 1-anilino-8-naphthalene sulfonate (ANS), Nile Red (NR) and 1-(N-phenylamino) naphthalene, N-(1-Naphthyl) aniline (1NPN). Interestingly, at pH4, where the Toxoplasma gondii Ferredoxin-NADP(+) reductase (TgFNR) is stable, an exclusive binding and fluorescence emission was observed for ANS. To understand the underlying difference in the binding of ANS, NR and 1NPN; their effect on the protein structure was studied in detail. ANS was found to interact with TgFNR via electrostatic as well as hydrophobic interactions at pH4. NR and 1NPN did not show any such binding to TgFNR in the similar conditions, however showed strong hydrophobic interaction in the presence of NaCl or DSS (2, 2-dimethyl-2-silapentane-5-sulfonate). The subsequent structural studies suggest that ANS, NaCl and DSS induced partial unfolding of TgFNR by modulating ionic interactions of the enzyme, leading to the exposure of buried hydrophobic patches amicable for the binding by NR and 1NPN. The induced unfolding of TgFNR by ANS is unique and thus cautions to use the fluorescent dye as simple indicator to probe the exposed hydrophobic patches of the protein or its folding intermediates.


Assuntos
Naftalenossulfonato de Anilina/metabolismo , Naftalenossulfonato de Anilina/farmacologia , Ferredoxinas/metabolismo , Interações Hidrofóbicas e Hidrofílicas , NADP/metabolismo , Oxirredutases/metabolismo , Toxoplasma/enzimologia , Oxirredutases/química , Ligação Proteica , Desdobramento de Proteína/efeitos dos fármacos
5.
Drug Metab Dispos ; 46(3): 259-267, 2018 03.
Artigo em Inglês | MEDLINE | ID: mdl-29298773

RESUMO

The effects of bovine serum albumin and human serum albumin on the unbound hepatic uptake clearance (PSu,inf) of the organic anion-transporting polypeptide substrates 1-anilino-8-naphthalene sulfonate (ANS) and pitavastatin (PTV) were determined using primary cultured rat hepatocytes and isolated human hepatocytes, respectively. The PSu,inf value of hepatocytes was estimated by dividing the initial uptake rate of these anions by their unbound concentrations. The PSu,inf values for ANS and PTV were enhanced in the presence of albumin, thereby demonstrating the phenomenon of "albumin-mediated" hepatic uptake. We previously constructed a "facilitated-dissociation" model, in which the interaction of the ligand-albumin complex with the cell surface enhanced the dissociation of that complex to provide unbound ligand for uptake to the hepatocytes [J Pharmacokinet Biopharm 16:165-181 (1988)]. That model was able to describe accurately the relationship between the enhancement of the PSu,inf values and the albumin concentration. By considering the enhancement of hepatic uptake clearance by albumin using this facilitated-dissociation model, we could predict accurately the PSu,inf in vivo from that obtained in isolated hepatocytes. In the light of these findings, we suggest that the facilitated-dissociation model is applicable to describing the phenomenon of albumin-mediated hepatic uptake via organic anion transporters and to evaluating hepatic uptake clearance in vivo.


Assuntos
Albuminas/metabolismo , Hepatócitos/metabolismo , Fígado/metabolismo , Transportadores de Ânions Orgânicos/metabolismo , Naftalenossulfonato de Anilina/farmacologia , Animais , Transporte Biológico/efeitos dos fármacos , Transporte Biológico/fisiologia , Células Cultivadas , Hepatócitos/efeitos dos fármacos , Humanos , Cinética , Fígado/efeitos dos fármacos , Masculino , Taxa de Depuração Metabólica/efeitos dos fármacos , Taxa de Depuração Metabólica/fisiologia , Quinolinas/farmacologia , Ratos , Ratos Sprague-Dawley
6.
Int J Biol Macromol ; 74: 327-36, 2015 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-25546245

RESUMO

Glossoscolex paulistus extracellular hemoglobin (HbGp) stability has been monitored in the presence of denaturant agents. 8-Anilino-1-naphtalene-sulfonic acid (ANS) was used, and spectroscopic and hydrodynamic studies were developed. Dodecyltrimethylammonium bromide (DTAB) induces an increase in ANS fluorescence emission intensity, with maximum emission wavelength blue-shifted from 517 to 493 nm. Two transitions are noticed, at 2.50 and 9.50 mmol/L of DTAB, assigned to ANS interaction with pre-micellar aggregates and micelles, respectively. In oxy-HbGp, ANS binds to protein sites less exposed to solvent, as compared to DTAB micelles. In DTAB-HbGp-ANS ternary system, at pH 7.0, protein aggregation, oligomeric dissociation and unfolding were observed, while, at pH 5.0, aggregation is absent. DTAB induced unfolding process displays two transitions, one due to oligomeric dissociation and the second one, probably, to the denaturation of dissociated subunits. Moreover, guanidine hydrochloride and urea concentrations above 1.5 and 4.0 mol/L, respectively, induce the full HbGp denaturation, with reduction of ANS-bound oxy-HbGp hydrophobic patches, as noticed by fluorescence quenching up to 1.0 and 5.0 mol/L of denaturants. Our results show clearly the differences in probe sensitivity to the surfactant, in the presence and absence of protein, and new insights into the denaturant effects on HbGp unfolding.


Assuntos
Naftalenossulfonato de Anilina/farmacologia , Hemoglobinas/química , Desnaturação Proteica/efeitos dos fármacos , Animais , Hidrodinâmica , Concentração de Íons de Hidrogênio , Oligoquetos/química , Oxigênio/química , Multimerização Proteica/efeitos dos fármacos , Estabilidade Proteica/efeitos dos fármacos
7.
J Biol Chem ; 287(46): 39001-11, 2012 Nov 09.
Artigo em Inglês | MEDLINE | ID: mdl-23007392

RESUMO

Glutathione S-transferases (GSTs) form a superfamily of multifunctional proteins with essential roles in cellular detoxification processes. A new fungal specific class of GST has been highlighted by genomic approaches. The biochemical and structural characterization of one isoform of this class in Phanerochaete chrysosporium revealed original properties. The three-dimensional structure showed a new dimerization mode and specific features by comparison with the canonical GST structure. An additional ß-hairpin motif in the N-terminal domain prevents the formation of the regular GST dimer and acts as a lid, which closes upon glutathione binding. Moreover, this isoform is the first described GST that contains all secondary structural elements, including helix α4' in the C-terminal domain, of the presumed common ancestor of cytosolic GSTs (i.e. glutaredoxin 2). A sulfate binding site has been identified close to the glutathione binding site and allows the binding of 8-anilino-1-naphtalene sulfonic acid. Competition experiments between 8-anilino-1-naphtalene sulfonic acid, which has fluorescent properties, and various molecules showed that this GST binds glutathionylated and sulfated compounds but also wood extractive molecules, such as vanillin, chloronitrobenzoic acid, hydroxyacetophenone, catechins, and aldehydes, in the glutathione pocket. This enzyme could thus function as a classical GST through the addition of glutathione mainly to phenethyl isothiocyanate, but alternatively and in a competitive way, it could also act as a ligandin of wood extractive compounds. These new structural and functional properties lead us to propose that this GST belongs to a new class that we name GSTFuA, for fungal specific GST class A.


Assuntos
Glutationa Transferase/química , Glutationa Transferase/metabolismo , Phanerochaete/metabolismo , Naftalenossulfonato de Anilina/farmacologia , Sítios de Ligação , Ligação Competitiva , Biotecnologia/métodos , Clonagem Molecular , Cristalografia por Raios X/métodos , Glutationa/química , Lignina , Espectrometria de Massas/métodos , Dados de Sequência Molecular , Ligação Proteica , Conformação Proteica , Isoformas de Proteínas , Proteínas Recombinantes/química
8.
Arterioscler Thromb Vasc Biol ; 32(8): 1979-90, 2012 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22539594

RESUMO

OBJECTIVE: Staphylococcus aureus can induce platelet aggregation. The rapidity and degree of this correlates with the severity of disseminated intravascular coagulation, and depends on platelet peptidoglycans. Surface-located thiol isomerases play an important role in platelet activation. The staphylococcal extracellular adherence protein (Eap) functions as an adhesin for host plasma proteins. Therefore we tested the effect of Eap on platelets. METHODS AND RESULTS: We found a strong stimulation of the platelet-surface thiol isomerases protein disulfide isomerase and endoplasmic reticulum stress proteins 57 and 72 by Eap. Eap induced thiol isomerase-dependent glycoprotein IIb/IIIa activation, granule secretion, and platelet aggregation. Treatment of platelets with thiol blockers, bacitracin, and anti-protein disulfide isomerase antibody inhibited Eap-induced platelet activation. The effect of Eap on platelets and protein disulfide isomerase activity was completely blocked by glycosaminoglycans. Inhibition by the hydrophobic probe bis(1-anilinonaphthalene 8-sulfonate) suggested the involvement of hydrophobic sites in protein disulfide isomerase and platelet activation by Eap. CONCLUSIONS: In the present study, we found an additional and yet unknown mechanism of platelet activation by a bacterial adhesin, involving stimulation of thiol isomerases. The thiol isomerase stimulatory and prothrombotic features of a microbial secreted protein are probably not restricted to S aureus and Eap. Because many microorganisms are coated with amyloidogenic proteins, it is likely that the observed mechanism is a more general one.


Assuntos
Proteínas de Bactérias/farmacologia , Ativação Plaquetária/efeitos dos fármacos , Isomerases de Dissulfetos de Proteínas/fisiologia , Proteínas de Ligação a RNA/farmacologia , Staphylococcus aureus/patogenicidade , Naftalenossulfonato de Anilina/farmacologia , Plaquetas/enzimologia , Ácido Ditionitrobenzoico/farmacologia , Humanos , Selectina-P/sangue , Proteoglicanas/farmacologia , Tetraspanina 30/sangue
9.
J Biochem ; 151(5): 533-40, 2012 May.
Artigo em Inglês | MEDLINE | ID: mdl-22390874

RESUMO

Human matrix metalloproteinase 7 (MMP-7) is the smallest matrix metalloproteinase. It plays important roles in tumour invasion and metastasis. 8-Anilinonaphthalene 1-sulphonate (ANS) is a fluorescent probe widely used for the analysis of proteins. It emits large fluorescence energy when its anilinonaphthalene group binds with hydrophobic regions of protein. In this study, we analysed the interaction of ANS and MMP-7. At pH 4.5-9.5, ANS inhibited MMP-7 activity in the hydrolysis of (7-methoxycoumarin-4-yl)acetyl-L-Pro-L-Leu-Gly-L-Leu-[N(3)-(2,4-dinitrophenyl)-L-2,3-diaminopropionyl]-L-Ala-L-Arg-NH(2). The inhibition was a non-competitive manner and depended on the time for pre-incubation of ANS and MMP-7. At pH 4.5-9.5, the fluorescence of ANS was not changed by the addition of MMP-7. At pH 3.5, MMP-7 lacked activity, and the fluorescence of ANS was increased by the addition of MMP-7. These results suggest that at pH 4.5-9.5, the sulphonic group of ANS binds with MMP-7 through electrostatic interaction, whereas at pH 3.5, the anilinonaphthalene group of ANS binds with MMP-7 through hydrophobic interaction.


Assuntos
Naftalenossulfonato de Anilina/química , Fluorescência , Corantes Fluorescentes/química , Metaloproteinase 7 da Matriz/química , Metaloproteinase 7 da Matriz/metabolismo , Naftalenossulfonato de Anilina/farmacologia , Ativação Enzimática/efeitos dos fármacos , Corantes Fluorescentes/farmacologia , Humanos , Interações Hidrofóbicas e Hidrofílicas , Inibidores de Metaloproteinases de Matriz/farmacologia , Relação Estrutura-Atividade
10.
PLoS One ; 6(11): e27037, 2011.
Artigo em Inglês | MEDLINE | ID: mdl-22069485

RESUMO

BACKGROUND: Apolipoprotein E (apoE) is a major protein of the lipoprotein transport system that plays important roles in lipid homeostasis and protection from atherosclerosis. ApoE is characterized by structural plasticity and thermodynamic instability and can undergo significant structural rearrangements as part of its biological function. Mutations in the 136-150 region of the N-terminal domain of apoE, reduce its low density lipoprotein (LDL) receptor binding capacity and have been linked with lipoprotein disorders, such as type III hyperlipoproteinemia (HLP) in humans. However, the LDL-receptor binding defects for these apoE variants do not correlate well with the severity of dyslipidemia, indicating that these variants may carry additional properties that contribute to their pathogenic potential. METHODOLOGY/PRINCIPAL FINDINGS: In this study we examined whether three type III HLP predisposing apoE3 variants, namely R136S, R145C and K146E affect the biophysical properties of the protein. Circular dichroism (CD) spectroscopy revealed that these mutations do not significantly alter the secondary structure of the protein. Thermal and chemical unfolding analysis revealed small thermodynamic alterations in each variant compared to wild-type apoE3, as well as effects in the reversibility of the unfolding transition. All variants were able to remodel multillamelar 1,2-Dimyristoyl-sn-glycero-3-phosphocholine (DMPC) vesicles, but R136S and R145C had reduced kinetics. Dynamic light scattering analysis indicated that the variant R136S exists in a higher-order oligomerization state in solution. Finally, 1-anilinonaphthalene-8-sulfonic acid (ANS) binding suggested that the variant R145C exposes a larger amount of hydrophobic surface to the solvent. CONCLUSIONS/SIGNIFICANCE: Overall, our findings suggest that single amino acid changes in the functionally important region 136-150 of apoE3 can affect the molecule's stability and conformation in solution and may underlie functional consequences. However, the magnitude and the non-concerted nature of these changes, make it unlikely that they constitute a distinct unifying mechanism leading to type III HLP pathogenesis.


Assuntos
Apolipoproteína E3/química , Apolipoproteína E3/genética , Astrocitoma/genética , Biofísica , Variação Genética , Hiperlipoproteinemia Tipo III/genética , Naftalenossulfonato de Anilina/farmacologia , Apolipoproteína E3/metabolismo , Astrocitoma/metabolismo , Astrocitoma/patologia , Dicroísmo Circular , Corantes Fluorescentes/farmacologia , Humanos , Hiperlipoproteinemia Tipo III/patologia , Cinética , Mutagênese Sítio-Dirigida , Mutação/genética , Ligação Proteica , Conformação Proteica , Estrutura Secundária de Proteína , Receptores de LDL/metabolismo , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Células Tumorais Cultivadas
11.
Biochemistry ; 50(51): 11009-14, 2011 Dec 27.
Artigo em Inglês | MEDLINE | ID: mdl-22106930

RESUMO

The sucrose permease (CscB) and lactose permease (LacY) of Escherichia coli belong to the oligosaccharide/H(+) symporter subfamily of the major facilitator superfamily, and both catalyze sugar/H(+) symport across the cytoplasmic membrane. Thus far, there is no common substrate for the two permeases; CscB transports sucrose, and LacY is highly specific for galactopyranosides. Determinants for CscB sugar specificity are unclear, but the structural organization of key residues involved in sugar binding appears to be similar in CscB and LacY. In this study, several sugars containing galactopyranosyl, glucopyranosyl, or fructofuranosyl moieties were tested for transport with cells overexpressing either CscB or LacY. CscB recognizes not only sucrose but also fructose and lactulose, but glucopyranosides are not transported and do not inhibit sucrose transport. The findings indicate that CscB exhibits practically no specificity with respect to the glucopyranosyl moiety of sucrose. Inhibition of sucrose transport by CscB tested with various fructofuranosides suggests that the C(3)-OH group of the fructofuranosyl ring may be important for recognition by CscB. Lactulose is readily transported by LacY, where specificity is directed toward the galactopyranosyl ring, and the affinity of LacY for lactulose is similar to that observed for lactose. The studies demonstrate that the substrate specificity of CscB is directed toward the fructofuranosyl moiety of the substrate, while the specificity of LacY is directed toward the galactopyranosyl moiety.


Assuntos
Dissacarídeos/metabolismo , Proteínas de Escherichia coli/metabolismo , Glicosídeos/metabolismo , Proteínas de Membrana Transportadoras/metabolismo , Proteínas de Transporte de Monossacarídeos/metabolismo , Simportadores/metabolismo , Alquilação/efeitos dos fármacos , Naftalenossulfonato de Anilina/farmacologia , Sítios de Ligação/efeitos dos fármacos , Ligação Competitiva , Transporte Biológico/efeitos dos fármacos , Cisteína/química , Escherichia coli/metabolismo , Proteínas de Escherichia coli/antagonistas & inibidores , Proteínas de Escherichia coli/química , Proteínas de Escherichia coli/genética , Frutose/análogos & derivados , Frutose/metabolismo , Galactosídeos/metabolismo , Glucosídeos/metabolismo , Cinética , Lactulose/análogos & derivados , Lactulose/metabolismo , Proteínas de Membrana Transportadoras/química , Proteínas de Membrana Transportadoras/genética , Modelos Moleculares , Conformação Molecular , Proteínas de Transporte de Monossacarídeos/antagonistas & inibidores , Proteínas de Transporte de Monossacarídeos/química , Proteínas de Transporte de Monossacarídeos/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Reagentes de Sulfidrila/farmacologia , Simportadores/antagonistas & inibidores , Simportadores/química , Simportadores/genética
12.
ACS Chem Biol ; 6(5): 492-501, 2011 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-21291269

RESUMO

Cyclin-dependent kinases (CDKs) are key regulatory enzymes in cell cycle progression and transcription. Aberrant activity of CDKs has been implicated in a number of medical conditions, and numerous small molecule CDK inhibitors have been reported as potential drug leads. However, these inhibitors exclusively bind to the ATP site, which is largely conserved among protein kinases, and clinical trials have not resulted in viable drug candidates, attributed in part to the lack of target selectivity. CDKs are unique among protein kinases, as their functionality strictly depends on association with their partner proteins, the cyclins. In an effort to identify potential target sites for disruption of the CDK-cyclin interaction, we probed the extrinsic fluorophore 8-anilino-1-naphthalene sulfonate (ANS) with human CDK2 and cyclin A using fluorescence spectroscopy and protein crystallography. ANS interacts with free CDK2 in a saturation-dependent manner with an apparent K(d) of 37 µM, and cyclin A displaced ANS from CDK2 with an EC(50) value of 0.6 µM. Co-crystal structures with ANS alone and in ternary complex with ATP site-directed inhibitors revealed two ANS molecules bound adjacent to one another, away from the ATP site, in a large pocket that extends from the DFG region above the C-helix. Binding of ANS is accompanied by substantial structural changes in CDK2, resulting in a C-helix conformation that is incompatible for cyclin A association. These findings indicate the potential of the ANS binding pocket as a new target site for allosteric inhibitors disrupting the interaction of CDKs and cyclins.


Assuntos
Naftalenossulfonato de Anilina/farmacologia , Ciclina A/metabolismo , Quinase 2 Dependente de Ciclina/química , Sítio Alostérico , Cristalografia por Raios X , Quinase 2 Dependente de Ciclina/metabolismo , Humanos , Imidazóis/farmacologia , Indóis/farmacologia , Ligantes , Conformação Proteica/efeitos dos fármacos , Espectrometria de Fluorescência
13.
J Biol Chem ; 285(15): 11489-97, 2010 Apr 09.
Artigo em Inglês | MEDLINE | ID: mdl-20145254

RESUMO

The small heat shock proteins (sHSPs) and alpha-crystallins are highly effective, ATP-independent chaperones that can bind denaturing client proteins to prevent their irreversible aggregation. One model of sHSP function suggests that the oligomeric sHSPs are activated to the client-binding form by dissociation at elevated temperatures to dimers or other sub-oligomeric species. Here we examine this model in a comparison of the oligomeric structure and chaperone activity of two conserved classes of cytosolic sHSPs in plants, the class I (CI) and class II (CII) proteins. Like the CI sHSPs, recombinant CII sHSPs from three divergent plant species, pea, wheat, and Arabidopsis, are dodecamers as determined by nano-electrospray mass spectrometry. While at 35 to 45 degrees C, all three CI sHSPs reversibly dissociate to dimers, the CII sHSPs retain oligomeric structure at high temperature. The CII dodecamers are, however, dynamic and rapidly exchange subunits, but unlike CI sHSPs, the exchange unit appears larger than a dimer. Differences in dodecameric structure are also reflected in the fact that the CII proteins do not hetero-oligomerize with CI sHSPs. Binding of the hydrophobic probe bis-ANS and limited proteolysis demonstrate CII proteins undergo significant, reversible structural changes at high temperature. All three recombinant CII proteins more efficiently protect firefly luciferase from insolubilization during heating than do the CI proteins. The CI and CII proteins behave strictly additively in client protection. In total, the results demonstrate that different sHSPs can achieve effective protection of client proteins by varied mechanisms.


Assuntos
Citosol/metabolismo , Proteínas de Choque Térmico Pequenas/metabolismo , Plantas/metabolismo , Naftalenossulfonato de Anilina/farmacologia , Arabidopsis/metabolismo , Chaperoninas/química , Eletroforese em Gel de Poliacrilamida , Modelos Biológicos , Chaperonas Moleculares/química , Pisum sativum/metabolismo , Dobramento de Proteína , Mapeamento de Interação de Proteínas , Espectrometria de Massas por Ionização por Electrospray/métodos , Temperatura , Triticum/metabolismo
14.
Bioorg Med Chem ; 18(1): 100-10, 2010 Jan 01.
Artigo em Inglês | MEDLINE | ID: mdl-19954984

RESUMO

The design of therapeutic compounds targeting transthyretin (TTR) is challenging due to the low specificity of interaction in the hormone binding site. Such feature is highlighted by the interactions of TTR with diclofenac, a compound with high affinity for TTR, in two dissimilar modes, as evidenced by crystal structure of the complex. We report here structural analysis of the interactions of TTR with two small molecules, 1-amino-5-naphthalene sulfonate (1,5-AmNS) and 1-anilino-8-naphthalene sulfonate (1,8-ANS). Crystal structure of TTR:1,8-ANS complex reveals a peculiar interaction, through the stacking of the naphthalene ring between the side-chain of Lys15 and Leu17. The sulfonate moiety provides additional interaction with Lys15' and a water-mediated hydrogen bond with Thr119'. The uniqueness of this mode of ligand recognition is corroborated by the crystal structure of TTR in complex with the weak analogue 1,5-AmNS, the binding of which is driven mainly by hydrophobic partition and one electrostatic interaction between the sulfonate group and the Lys15. The ligand binding motif unraveled by 1,8-ANS may open new possibilities to treat TTR amyloid diseases by the elucidation of novel candidates for a more specific pharmacophoric pattern.


Assuntos
Amiloidose/tratamento farmacológico , Naftalenossulfonatos/química , Naftalenossulfonatos/farmacologia , Pré-Albumina/química , Pré-Albumina/metabolismo , Amiloide/efeitos dos fármacos , Naftalenossulfonato de Anilina/química , Naftalenossulfonato de Anilina/farmacologia , Sítios de Ligação , Cristalografia por Raios X , Humanos , Ligantes , Modelos Moleculares , Ligação Proteica , Conformação Proteica
15.
Biophys J ; 97(9): 2567-76, 2009 Nov 04.
Artigo em Inglês | MEDLINE | ID: mdl-19883600

RESUMO

Rapid and robust methods are required to quantify the effect of hydrodynamic shear on protein conformation change. We evaluated such strategies in this work and found that the binding of the fluorescent probe 4,4'-dianilino-1,1'-binaphthyl-5,5'-disulfonic acid (bis-ANS) to hydrophobic pockets in the blood protein von Willebrand factor (VWF) is enhanced upon the application of fluid shear to the isolated protein. Significant structural changes were observed when the protein was sheared at shear rates >or= 6000/s for approximately 3.5 min. The binding of bis-ANS to multimeric VWF, but not dimeric VWF or control protein bovine serum albumin, was enhanced upon fluid shear application. Thus, high-molecular-weight VWF is more susceptible to conformation change upon tensile loading. Although bis-ANS itself did not alter the conformation of VWF, it stabilized protein conformation once it bound the sheared molecule. Bis-ANS binding to VWF was reduced when the sheared protein was allowed to relax before dye addition. Taken together with functional data in the literature, our results suggest that shear-induced conformation changes in VWF reported by bis-ANS correlate well with the normal function of the protein under physiological/pathological fluid flow conditions. Further, this study introduces the fluorescent dye bis-ANS as a tool that may be useful in studies of shear-induced protein conformation change.


Assuntos
Naftalenossulfonato de Anilina/farmacologia , Espectrometria de Fluorescência/métodos , Fator de von Willebrand/química , Biofísica/métodos , Dimerização , Corantes Fluorescentes/farmacologia , Humanos , Modelos Moleculares , Conformação Molecular , Peso Molecular , Conformação Proteica , Coloração pela Prata , Estresse Mecânico , Resistência à Tração
16.
Mol Endocrinol ; 23(8): 1231-41, 2009 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-19443608

RESUMO

Ligand-induced conformational perturbations in androgen receptor (AR) are important in coactivator recruitment and transactivation. However, molecular rearrangements in AR ligand-binding domain (AR-LBD) associated with agonist binding and their kinetic and thermodynamic parameters are poorly understood. We used steady-state second-derivative absorption and emission spectroscopy, pressure and temperature perturbations, and 4,4'-bis-anilinonaphthalene 8-sulfonate (bis-ANS) partitioning to determine the kinetics and thermodynamics of the conformational changes in AR-LBD after dihydrotestosterone (DHT) binding. In presence of DHT, the second-derivative absorption spectrum showed a red shift and a change in peak-to-peak distance. Emission intensity increased upon DHT binding, and center of spectral mass was blue shifted, denoting conformational changes resulting in more hydrophobic environment for tyrosines and tryptophans within a more compact DHT-bound receptor. In pressure perturbation calorimetry, DHT-induced energetic stabilization increased the Gibbs free energy of unfolding to 8.4 +/- 1.3 kcal/mol from 3.5 +/- 1.6 kcal/mol. Bis-ANS partitioning studies revealed that upon DHT binding, AR-LBD underwent biphasic rearrangement with a high activation energy (13.4 kcal/mol). An initial, molten globule-like burst phase (k approximately 30 sec(-1)) with greater solvent accessibility was followed by rearrangement (k approximately 0.01 sec(-1)), leading to a more compact conformation than apo-AR-LBD. Molecular simulations demonstrated unique sensitivity of tyrosine and tryptophan residues during pressure unfolding with rearrangement of residues in the coactivator recruitment surfaces distant from the ligand-binding pocket. In conclusion, DHT binding leads to energetic stabilization of AR-LBD domain and substantial rearrangement of residues distant from the ligand-binding pocket. DHT binding to AR-LBD involves biphasic receptor rearrangement including population of a molten globule-like intermediate state.


Assuntos
Di-Hidrotestosterona/farmacologia , Receptores Androgênicos/química , Naftalenossulfonato de Anilina/farmacologia , Calorimetria/métodos , Humanos , Cinética , Ligantes , Pressão , Conformação Proteica , Estrutura Terciária de Proteína , Solventes/química , Temperatura , Termodinâmica , Fatores de Tempo , Tirosina/química
17.
Biofizika ; 53(4): 632-7, 2008.
Artigo em Russo | MEDLINE | ID: mdl-18819280

RESUMO

The temporal organization of the synthesis of RNA and antibodies in immunocompetent cells has been investigated by fluorecsent spectroscopy. Two fluorochromes: acridine orange and 1-anilino-8-naphthalenesulfonate were used. Temporal changes in the mean values of the characteristic parameters alpha' and beta in blood lymphocytes stained with acridine orange and 1-anilino-8-naphthalenesulfonate in the immune reaction to the introduction of ovalbumin were obtained. It was shown that the maximal increase in RNA and protein synthesis in blood lymphocytes by a factor of 6-8 occurs after the fourth immunization. The simultaneous increase in RNA and protein synthesis in cells was indicative of cell activation. A general response of immunocompetent blood cells to the introduction of the antigen was observed. The results confirm the idea about the cooperative interaction between different lymphocyte subpopulations during the synthesis of antibodies.


Assuntos
Formação de Anticorpos/fisiologia , Linfócitos/metabolismo , Biossíntese de Proteínas/fisiologia , RNA/biossíntese , Laranja de Acridina/farmacologia , Naftalenossulfonato de Anilina/farmacologia , Animais , Antígenos/imunologia , Antígenos/metabolismo , Corantes Fluorescentes/farmacologia , Linfócitos/imunologia , RNA/imunologia , Coelhos , Espectrometria de Fluorescência/métodos
18.
Chem Senses ; 33(6): 523-30, 2008 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-18487524

RESUMO

In frogs, the responses of the glossopharyngeal nerve (GL) to NaCl are enhanced after treatment of the tongue with 8-anilino-1-naphthalene-sulfonic acid (ANS), a hydrophobic probe for biological membranes. The enhancement by ANS treatment has been explained by removal of Ca2+ from the receptor membrane treated with ANS. To explore the mechanism of enhancement by ANS treatment, we recorded neural responses from the frog GL. After ANS treatment, treatment with 10 mM CaCl2 prior to stimulation of NaCl did not affect the enhanced responses to 100 mM NaCl. The response to a relatively high concentration of CaCl2 (50 mM) was enhanced after ANS treatment. It is difficult to interpret these neural events in terms of modulation of the responses by membrane-bound calcium. The presence of NiCl2 in stimulating solution is known as an enhancer. Neural events after ANS treatment were similar to those caused by NiCl2. Our previous studies have demonstrated that enhancement of the responses to electrolytes by NiCl2 is due to modulation of the responses of water fibers in the GL. Water fibers are characterized by sensitivity to water or CaCl2, and they also respond to relatively high concentrations of electrolytes such as NaCl and choline Cl. Using a suction electrode method, we recorded unitary impulses from single water fibers. The ANS treatment led greatly enhanced responses to NaCl or choline Cl in water fibers, suggesting that enhancement by the ANS treatment is due to modulation of the responses of water fibers as well as enhancement by NiCl2. It appears that distinct receptors for each separate cation responsible for the neural responses in water fibers interact with a membrane element that is affected by ANS or Ni2+.


Assuntos
Naftalenossulfonato de Anilina/farmacologia , Nervo Glossofaríngeo/efeitos dos fármacos , Nervo Glossofaríngeo/fisiologia , Animais , Colina/metabolismo , Eletrólitos , Eletrofisiologia , Rana catesbeiana , Cloreto de Sódio/metabolismo , Água
19.
Biochem Biophys Res Commun ; 362(3): 651-7, 2007 Oct 26.
Artigo em Inglês | MEDLINE | ID: mdl-17761143

RESUMO

An acetylated modification of a tumor-associated ganglioside GD3 (9-O-AcGD3) is expressed in certain tumors and present during early stages of development in different tissues. However, the status and the role of 9-O-AcGD3 in the erythroid progenitor cells remain unexplored. Here, we report the level of 9-O-AcGD3 during erythropoiesis in bone marrow is down regulated during maturation. Signaling via 9-O-AcGD3 induces alteration of morphology and membrane characteristics of mature erythrocytes. This process also induces, a cell death program in these erythrocytes even in the absence of nucleus, mitochondria and other cell organelles sharing features of apoptosis in nucleated cells like membrane alterations, vesicularization, phosphatidyl serine exposure, activation of cysteine proteases like caspase-3. This is the first report of a programmed cell death pathway in mature erythrocytes, triggered by 9-O-AcGD3 contrary to their anti-apoptotic role in lymphoblasts, which suggests a cell specific role of this O-acetyl ester of GD3.


Assuntos
Apoptose , Eritrócitos/metabolismo , Gangliosídeos/metabolismo , Adolescente , Naftalenossulfonato de Anilina/farmacologia , Medula Óssea/metabolismo , Células da Medula Óssea/metabolismo , Caspase 3/metabolismo , Membrana Celular/metabolismo , Criança , Pré-Escolar , Ativação Enzimática , Eritrócitos/patologia , Glicoforinas/metabolismo , Humanos , Fosfatidilserinas/química
20.
Langmuir ; 23(8): 4130-6, 2007 Apr 10.
Artigo em Inglês | MEDLINE | ID: mdl-17348695

RESUMO

The primary objective of the present study is to understand how the different nonionic surfactants modify the anisotropic interface of cationic water-in-oil (W/O) microemulsions and thus influences the catalytic efficiency of surface-active enzymes. Activity of Chromobacterium viscosum lipase (CV-lipase) was estimated in several mixed reverse micelles prepared from CTAB and four different nonionic surfactants, Brij-30, Brij-92, Tween-20, and Tween-80/water/isooctane/n-hexanol at different z ([cosurfactant]/[surfactants]) values, pH 6 (20 mM phosphate), 25 degrees C across a varying range of W0 ([water]/[surfactants]) using p-nitrophenyl-n-octanoate as the substrate. Lipase activity in mixed reverse micelles improved maximum up to approximately 200% with increasing content of non-ionic surfactants compared to that in CTAB probably due to the reduced positive charge density as well as plummeted n-hexanol (competitive inhibitor of lipase) content at the interfacial region of cationic W/O microemulsions. The highest activity of lipase was observed in CTAB (10 mM) + Brij-30 (40 mM)/isooctane/n-hexanol)/water system, k2 = 913 +/- 5 cm3 g-1 s-1. Interestingly, this observed activity is even higher than that obtained in sodium bis (2-ethyl-1-hexyl) sulfosuccinate (AOT)/n-heptane reverse micelles, the most popular W/O microemulsion in micellar enzymology. To ascertain the influence of non-ionic surfactants in improving the activity of surface-active enzymes is not limited to lipase only, we have also investigated the catalytic activity of Horseradish peroxidase (HRP) in different mixed W/O microemulsions. Here also following the similar trend as observed for lipase, HRP activity enhanced up to 2.5 fold with increasing concentration of nonionic surfactants. Finally, the enzyme activity was correlated with the change in the microenvironment of mixed reverse micelles by steady-state fluorescence study using 8-anilino-1-napthalenesulphonic acid (ANS) as probe.


Assuntos
Físico-Química/métodos , Enzimas/química , Íons , Lipase/química , Micelas , Tensoativos/química , Naftalenossulfonato de Anilina/farmacologia , Bactérias/enzimologia , Cátions , Corantes Fluorescentes/farmacologia , Peroxidase do Rábano Silvestre/química , Espectrometria de Fluorescência , Propriedades de Superfície , Temperatura , Água/química
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