Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 44
Filtrar
1.
Immunobiology ; 226(1): 152030, 2021 01.
Artigo em Inglês | MEDLINE | ID: mdl-33278708

RESUMO

Lipopolysaccharides (LPSs) induce a wide spectrum of functional activities after interaction with blood cells. Effect of structure of toxic LPS from S- and Re-chemotypes of E. coli and/or non-toxic LPS of Rhodobacter capsulatus PG (R. caps.) on activation of neutrophils and monocytes of human whole blood were studied, particularly, expression of TLR4, CD14 and CD11b receptors, phagocytosis of BioParticles Alexa Fluor 488, synthesis of cytokines and chemokines. A leading role of CD11b receptor in phagocytic activity of neutrophils primed by LPS from various E. coli chemotypes was shown. The non-toxic LPS of R. caps. does not affect the efficiency of phagocytosis activity of the neutrophils. The LPS of R. caps. was shown to induce production of TRIF-dependent cytokine IFN-ß in human whole blood leukocytes selectively, without activating MyD88-dependent pathway of pro-inflammatory cytokine synthesis, displaying properties of patrial agonist of TLR4. Structure and biological activity of LPS R. caps. allows considering it as a promising immunity stimulating pharmacological agent.


Assuntos
Infecções por Escherichia coli/imunologia , Escherichia coli/fisiologia , Lipopolissacarídeos/farmacologia , Monócitos/imunologia , Neutrófilos/imunologia , Rhodobacter capsulatus/fisiologia , Receptor 4 Toll-Like/agonistas , Adulto , Antígeno CD11b/metabolismo , Feminino , Voluntários Saudáveis , Humanos , Imunização , Masculino , Fagocitose
2.
Plant Cell Physiol ; 62(1): 100-110, 2021 Mar 25.
Artigo em Inglês | MEDLINE | ID: mdl-33169162

RESUMO

Reactive sulfur species (RSS) are involved in bioactive regulation via persulfidation of proteins. However, how cells regulate RSS-based signaling and RSS metabolism is poorly understood, despite the importance of universal regulation systems in biology. We previously showed that the persulfide-responsive transcriptional factor SqrR acts as a master regulator of sulfide-dependent photosynthesis in proteobacteria. Here, we demonstrated that SqrR also binds heme at a near one-to-one ratio with a binding constant similar to other heme-binding proteins. Heme does not change the DNA-binding pattern of SqrR to the target gene promoter region; however, DNA-binding affinity of SqrR is reduced by the binding of heme, altering its regulatory activity. Circular dichroism spectroscopy clearly showed secondary structural changes in SqrR by the heme binding. Incremental change in the intracellular heme concentration is associated with small, but significant reduction in the transcriptional repression by SqrR. Overall, these results indicate that SqrR has an ability to bind heme to modulate its DNA-binding activity, which may be important for the precise regulation of RSS metabolism in vivo.


Assuntos
Proteínas de Bactérias/metabolismo , Proteínas de Ligação a DNA/metabolismo , Genes Bacterianos , Proteínas Repressoras/metabolismo , Rhodobacter capsulatus/metabolismo , Sulfetos/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/fisiologia , Proteínas de Ligação a DNA/genética , Proteínas de Ligação a DNA/fisiologia , Escherichia coli , Regulação Bacteriana da Expressão Gênica , Microrganismos Geneticamente Modificados , Proteínas Repressoras/genética , Proteínas Repressoras/fisiologia , Rhodobacter capsulatus/genética , Rhodobacter capsulatus/fisiologia
3.
Microbiology (Reading) ; 163(9): 1355-1363, 2017 09.
Artigo em Inglês | MEDLINE | ID: mdl-28869409

RESUMO

Small bacteriophage-like particles called gene transfer agents (GTAs) that mediate DNA transfer between cells are produced by a variety of prokaryotes. The model GTA, produced by the alphaproteobacterium Rhodobacter capsulatus (RcGTA), is controlled by several cellular regulators, and production is induced upon entry into the stationary phase. We report that RcGTA production and gene transfer are stimulated by nutrient depletion. Cells depleted of organic carbon or blocked for amino acid biosynthesis increased RcGTA production and release from cells. Furthermore, cells lacking the sole RelA-SpoT homologue produced decreased levels of RcGTA, and the RNA polymerase omega (ω) subunit was required for appreciable production of RcGTA.


Assuntos
RNA Polimerases Dirigidas por DNA/genética , RNA Polimerases Dirigidas por DNA/metabolismo , Transferência Genética Horizontal , Rhodobacter capsulatus/fisiologia , Aminoácidos/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Carbono/metabolismo , Regulação Bacteriana da Expressão Gênica , Mutação , Plasmídeos/genética , Regiões Promotoras Genéticas
4.
J Phys Chem Lett ; 8(18): 4498-4503, 2017 Sep 21.
Artigo em Inglês | MEDLINE | ID: mdl-28872878

RESUMO

Iron-sulfur proteins play essential roles in various biological processes. Their electronic structure and vibrational dynamics are key to their rich chemistry but nontrivial to unravel. Here, the first ultrafast transient absorption and impulsive coherent vibrational spectroscopic (ICVS) studies on 2Fe-2S clusters in Rhodobacter capsulatus ferreodoxin VI are characterized. Photoexcitation initiated populations on multiple excited electronic states that evolve into each other in a long-lived charge-transfer state. This suggests a potential light-induced electron-transfer pathway as well as the possibility of using iron-sulfur proteins as photosensitizers for light-dependent enzymes. A tyrosine chain near the active site suggests potential hole-transfer pathways and affirms this electron-transfer pathway. The ICVS data revealed vibrational bands at 417 and 484 cm-1, with the latter attributed to an excited-state mode. The temperature dependence of the ICVS modes suggests that the temperature effect on protein structure or conformational heterogeneities needs to be considered during cryogenic temperature studies.


Assuntos
Proteínas Ferro-Enxofre/química , Conformação Proteica , Rhodobacter capsulatus/fisiologia , Temperatura , Espectroscopia de Ressonância de Spin Eletrônica , Ferredoxinas , Guanina/análogos & derivados , Proteínas Ferro-Enxofre/fisiologia , Oxirredução , Fotoquímica , Análise Espectral , Enxofre/química , Vibração
5.
Mol Microbiol ; 92(6): 1260-78, 2014 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-24784901

RESUMO

Gene transfer agents (GTAs) are genetic exchange elements that resemble small DNA bacteriophages that transfer random pieces of the producing cell's genome to recipient cells. The best-studied GTA is that of Rhodobacter capsulatus, termed RcGTA. We discovered that the putative response regulator CtrA, which is essential for RcGTA production, is required for RcGTA-mediated gene acquisition, and confirmed that a RecA homologue is required. It was also discovered that a DprA (DNA-protecting protein A) homologue is essential for RcGTA-mediated gene acquisition, and that dprA expression is induced by gtaI-dependent quorum-sensing and non-phosphorylated CtrA. Modelling of the R. capsulatus DprA structure indicated the presence of a C-terminal region that resembles a dsDNA-binding protein domain. Purified His-tagged R. capsulatus DprA protein bound to both single-stranded (ss)DNA and double-stranded (ds)DNA, but with a greater affinity for ssDNA. Additionally, DprA protected dsDNA from endonuclease digestion, and increased the rate of nucleation of Escherichia coli RecA onto ssDNA. Single-cell expression analyses revealed that dprA is expressed in the majority of cells throughout a population. Overall, the results suggest that incorporation of RcGTA DNA into the recipient cell genome proceeds through a homologous recombination pathway resembling DNA recombination in natural transformation.


Assuntos
Proteínas de Bactérias/metabolismo , Proteínas de Ligação a DNA/metabolismo , Transferência Genética Horizontal , Proteínas de Membrana/metabolismo , Percepção de Quorum , Recombinases Rec A/metabolismo , Rhodobacter capsulatus/enzimologia , Rhodobacter capsulatus/fisiologia , Proteínas de Bactérias/química , Recombinação Homóloga , Proteínas de Membrana/química , Modelos Moleculares , Conformação Proteica , Rhodobacter capsulatus/genética , Rhodobacter capsulatus/metabolismo
6.
BMC Microbiol ; 14: 71, 2014 Mar 19.
Artigo em Inglês | MEDLINE | ID: mdl-24645667

RESUMO

BACKGROUND: Production of the gene transfer agent RcGTA in the α-proteobacterium Rhodobacter capsulatus is dependent upon the response regulator protein CtrA. Loss of this regulator has widespread effects on transcription in R. capsulatus, including the dysregulation of numerous genes encoding other predicted regulators. This includes a set of putative components of a partner-switching signaling pathway with sequence homology to the σ-regulating proteins RsbV, RsbW, and RsbY that have been extensively characterized for their role in stress responses in gram-positive bacteria. These R. capsulatus homologues, RbaV, RbaW, and RbaY, have been investigated for their possible role in controlling RcGTA gene expression. RESULTS: A mutant strain lacking rbaW showed a significant increase in RcGTA gene expression and production. Mutation of rbaV or rbaY led to a decrease in RcGTA gene expression and production, and these mutants also showed decreased viability in the stationary phase and produced unusual colony morphologies. In vitro and in vivo protein interaction assays demonstrated that RbaW and RbaV interact. A combination of gene disruptions and protein-protein interaction assays were unsuccessful in attempts to identify a cognate σ factor, and the genetic data support a model where the RbaV protein that is the determinant regulator of RcGTA gene expression in this system. CONCLUSIONS: These findings provide new information about RcGTA regulation by a putative partner-switching system and further illustrate the integration of RcGTA production into R. capsulatus physiology.


Assuntos
Proteínas de Bactérias/metabolismo , Regulação Bacteriana da Expressão Gênica , Viabilidade Microbiana , Rhodobacter capsulatus/genética , Rhodobacter capsulatus/fisiologia , Fatores de Transcrição/metabolismo , Proteínas de Bactérias/genética , Deleção de Genes , Perfilação da Expressão Gênica , Mapeamento de Interação de Proteínas , Rhodobacter capsulatus/crescimento & desenvolvimento , Rhodobacter capsulatus/metabolismo , Fatores de Transcrição/genética
7.
Mol Microbiol ; 90(6): 1277-92, 2013 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24134691

RESUMO

The purple bacterium Rhodobacter capsulatus is unique among Rhodobacteriacae as it contains a putative iron response regulator (Irr) but does not possess a copy of the ferric uptake regulator (Fur). Interestingly, an in-frame deletion mutant of Irr shows no major role in iron homeostasis. Instead, we showed that the previously identified activator of haem gene expression HbrL is a crucial regulator of iron homeostasis. We demonstrated that an HbrL deletion strain is unable to grow in iron-limited medium in aerobic, semi-aerobic and photosynthetic conditions and that suppressor strains can be isolated with mutations in iron uptake genes. Gene expression studies revealed that HbrL is a transcriptional activator of multiple ferrous and ferric iron uptake systems in addition to a haem uptake system. Finally, HbrL activates the expression of numerous haem biosynthesis genes. Thus, HbrL has a central role in controlling the amount of iron transport in conjunction with the synthesis of its cognate tetrapyrrole haem.


Assuntos
Proteínas de Bactérias/fisiologia , Genes Bacterianos , Heme/biossíntese , Ferro/metabolismo , Rhodobacter capsulatus/fisiologia , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Regulação Bacteriana da Expressão Gênica , Homeostase , Transporte de Íons/genética , Rhodobacter capsulatus/genética , Tetrapirróis/biossíntese , Fatores de Transcrição/genética , Fatores de Transcrição/metabolismo
8.
Mol Microbiol ; 87(4): 802-17, 2013 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-23279213

RESUMO

The gene transfer agent produced by Rhodobacter capsulatus (RcGTA) resembles a small tailed bacteriophage that packages almost random genomic DNA segments that may be transferred to other R. capsulatus cells. Gene transfer agents are produced by a number of prokaryotes; however, no receptors have been identified. We investigated the RcGTA recipient capability of wild-type R. capsulatus cells at different culture growth phases, and found that the frequency of RcGTA-dependent acquisition of an allele increases as cultures enter the stationary phase. We also found that RcGTA adsorption to cells follows a similar trend. RcGTA recipient capability and adsorption were found to be dependent on the GtaR/I quorum-sensing (QS) system. Production of an extracellular polysaccharide was found to be regulated by GtaR/I QS, as was production of the cell capsule. A number of QS-regulated putative polysaccharide biosynthesis genes were identified, and mutagenesis of two of these genes, rcc01081 and rcc01932, yielded strains that lack a capsule. Furthermore, these mutants were impaired in RcGTA recipient capability and adsorption, as was a non-encapsulated wild-type isolate of R. capsulatus. Overall, our results indicate that capsular polysaccharide is a receptor for the gene transfer agent of R. capsulatus, RcGTA.


Assuntos
Proteínas de Bactérias/metabolismo , Polissacarídeos Bacterianos/metabolismo , Percepção de Quorum , Rhodobacter capsulatus/genética , Transdução Genética , Proteínas de Bactérias/genética , Regulação Bacteriana da Expressão Gênica , Rhodobacter capsulatus/fisiologia
9.
J Bacteriol ; 195(2): 261-9, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23123911

RESUMO

The Rhodobacter capsulatus cbb(3)-type cytochrome c oxidase (cbb(3)-Cox) belongs to the heme-copper oxidase superfamily, and its subunits are encoded by the ccoNOQP operon. Biosynthesis of this enzyme is complex and needs dedicated biogenesis genes (ccoGHIS). It also relies on the c-type cytochrome maturation (Ccm) process, which requires the ccmABCDEFGHI genes, because two of the cbb(3)-Cox subunits (CcoO and CcoP) are c-type cytochromes. Recently, we reported that mutants lacking CcoA, a major facilitator superfamily type transporter, produce very small amounts of cbb(3)-Cox unless the growth medium is supplemented with copper. In this work, we isolated "Cu-unresponsive" derivatives of a ccoA deletion strain that exhibited no cbb(3)-Cox activity even upon Cu supplementation. Molecular characterization of these mutants revealed missense mutations in the ccmA or ccmF gene, required for the Ccm process. As expected, Cu-unresponsive mutants lacked the CcoO and CcoP subunits due to Ccm defects, but remarkably, they contained the CcoN subunit of cbb(3)-Cox. Subsequent construction and examination of single ccm knockout mutants demonstrated that membrane insertion and stability of CcoN occurred in the absence of the Ccm process. Moreover, while the ccm knockout mutants were completely incompetent for photosynthesis, the Cu-unresponsive mutants grew photosynthetically at lower rates and produced smaller amounts of cytochromes c(1) and c(2) than did a wild-type strain due to their restricted Ccm capabilities. These findings demonstrate that different levels of Ccm efficiency are required for the production of various c-type cytochromes and reveal for the first time that maturation of the heme-Cu-containing subunit CcoN of R. capsulatus cbb(3)-Cox proceeds independently of that of the c-type cytochromes during the biogenesis of this enzyme.


Assuntos
Vias Biossintéticas/genética , Complexo IV da Cadeia de Transporte de Elétrons/biossíntese , Mutação de Sentido Incorreto , Rhodobacter capsulatus/enzimologia , Cobre/metabolismo , Complexo IV da Cadeia de Transporte de Elétrons/genética , Técnicas de Inativação de Genes , Fotossíntese , Subunidades Proteicas/biossíntese , Subunidades Proteicas/genética , Rhodobacter capsulatus/genética , Rhodobacter capsulatus/crescimento & desenvolvimento , Rhodobacter capsulatus/fisiologia
10.
Bioresour Technol ; 128: 513-7, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23201907

RESUMO

Photofermentative hydrogen (H(2)) production from glucose with the photosynthetic bacterium Rhodobacter capsulatus JP91 (hup(-)) was examined using a photobioreactor operated in continuous mode. Stable and high hydrogen yields on glucose were obtained at three different retention times (HRTs; 24, 48 and 72 h). The H(2) production rates, varying between 0.57 and 0.81 mmol/h, and optical densities (OD(600 nm)) were similar for the different HRTs examined. However, the rate of glucose consumption was influenced by HRT being greater at HRT 24h than HRTs 48 and 72 h. The highest hydrogen yield, 9.0 ± 1.2 mol H(2)/mol glucose, was obtained at 48 h HRT. These results show that single stage photofermentative hydrogen production from glucose using photobioreactors operated in continuous culture mode gives high, nearly stoichiometric yields of hydrogen from glucose, and thus is considerably more promising than either two stage photofermentation or co-culture approaches.


Assuntos
Glucose/metabolismo , Hidrogênio/metabolismo , Fotobiorreatores/microbiologia , Fotossíntese/fisiologia , Rhodobacter capsulatus/fisiologia , Desenho de Equipamento , Análise de Falha de Equipamento , Fermentação/fisiologia , Fermentação/efeitos da radiação , Hidrogênio/isolamento & purificação , Fotossíntese/efeitos da radiação , Rhodobacter capsulatus/efeitos da radiação
11.
Microbiology (Reading) ; 159(Pt 1): 96-106, 2013 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-23154973

RESUMO

The Rhodobacter capsulatus response regulator CtrA controls the expression of 227 genes, some of which are upregulated by both the phosphorylated and unphosphorylated forms of CtrA. Therefore, CtrA concentration alone, regardless of phosphorylation state, may determine expression of downstream genes, yet little is known about the regulation of ctrA in R. capsulatus. In this study we used a ctrA : : lacZ fusion plasmid to study the effects of medium composition, growth conditions and growth phase on R. capsulatus ctrA gene expression. These experiments indicate that ctrA expression is higher when cultures are grown in phototrophic (anaerobic) conditions compared with chemotrophic (aerobic) conditions, and is higher when grown in a minimal medium compared with a rich medium. We used several mutants to investigate possible regulatory pathways, and found that in R. capsulatus ctrA is not autoregulated but is regulated by a quorum-sensing system. The expression of ctrA increased as cell cultures moved through exponential phase and into stationary phase, with high levels of expression persisting long after culture turbidity plateaued. Although this growth phase-dependent pattern of expression was also observed in a quorum-sensing mutant, the magnitude of ctrA expression was about 50% of the wild-type strain at all phases. Furthermore, reduction of phosphate concentration in the growth medium decreased ctrA expression in a culture density-independent manner, whereas reduction of malic acid (carbon source) or ammonium (nitrogen source) concentration had no effect. The regulation of ctrA expression in R. capsulatus appears to require the coordination of multiple pathways involved in detecting a variety of environmental conditions.


Assuntos
Regulação Bacteriana da Expressão Gênica , Rhodobacter capsulatus/genética , Fatores de Transcrição/biossíntese , Transcrição Gênica , Aerobiose , Anaerobiose , Fusão Gênica Artificial , Meios de Cultura/química , Análise Mutacional de DNA , Genes Reporter , Plasmídeos , Percepção de Quorum , Rhodobacter capsulatus/metabolismo , Rhodobacter capsulatus/fisiologia , Fatores de Transcrição/genética , beta-Galactosidase/biossíntese , beta-Galactosidase/genética
12.
FEMS Microbiol Lett ; 331(1): 53-62, 2012 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-22443140

RESUMO

Production of the gene transfer agent of Rhodobacter capsulatus, RcGTA, is dependent upon several cellular regulatory systems, including a putative phosphorelay involving the CtrA and CckA proteins. These proteins are also involved in flagellar motility in R. capsulatus. The interactions of proteins in this system are best understood in Caulobacter crescentus where CtrA is activated by phosphorylation by the CckA-ChpT phosphorelay. CtrA~P activity is further controlled by SciP, which represses ctrA transcription and CtrA activation of transcription. We show that R. capsulatus chpT and cckA mutants both have greatly reduced motility and RcGTA activity. Unlike the ctrA mutant where RcGTA gene transcription is absent, the decrease in RcGTA activity is because of reduced release of RcGTA from the cells. The sciP mutant is not affected for RcGTA production but our results support the C. crescentus model of SciP repression of flagellar motility genes. We show that both unphosphorylated and phosphorylated CtrA can activate RcGTA gene expression, while CtrA~P seems to be required for release of the particle and expression of motility genes. This has led us to a new model of how this regulatory system controls motility and production of RcGTA in R. capsulatus.


Assuntos
Flagelos/fisiologia , Regulação Bacteriana da Expressão Gênica , Transferência Genética Horizontal , Rhodobacter capsulatus/genética , Proteínas de Bactérias , Caulobacter crescentus/genética , Proteínas de Ligação a DNA , Genes Bacterianos , Locomoção , Rhodobacter capsulatus/fisiologia , Fatores de Transcrição , Estados Unidos
13.
J Anim Physiol Anim Nutr (Berl) ; 96(6): 1091-100, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-21929698

RESUMO

The present study was conducted to investigate the effect of dietary Rhodobacter capsulatus on lipid fractions and egg-yolk fatty acid composition in laying hens. Thirty-six laying hens (30 weeks old) were randomly assigned into two dietary groups fed diets with (0.04%) or without (control) R. capsulatus for a 60-day feeding trial. Dietary R. capsulatus decreased (p < 0.05) serum and hepatic cholesterol and increased (p < 0.05) the excreta cholesterol, and resultant lower (p < 0.05) cholesterol contents in egg yolk. The concentration of polyunsaturated fatty acids (PUFA) and ratio to saturated fatty acids in egg yolk was improved (p < 0.05) by dietary R. capsulatus. The concentration of hepatic bile acid was increased (p < 0.05) and excreta bile acid was decreased (p < 0.01) in the laying hens fed R. capsulatus diet. The incorporation of 1-(14) C-palmitic acid into hepatic lipids and lipid fractions was increased (p < 0.05) in laying hens fed R. capsulatus diet. Moreover, dietary R. capsulatus did not appear to cause any adverse effects on laying hen performances. Therefore, dietary supplementation of R. capsulatus in layer diets may be a feasible means of producing eggs with lower cholesterol and higher PUFA contents for health conscious consumers.


Assuntos
Galinhas/fisiologia , Gema de Ovo/química , Ácidos Graxos/química , Lipídeos/química , Rhodobacter capsulatus/fisiologia , Ração Animal/análise , Fenômenos Fisiológicos da Nutrição Animal , Animais , Dieta/veterinária , Feminino , Oviposição , Probióticos
14.
Biochim Biophys Acta ; 1817(2): 336-52, 2012 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-22079525

RESUMO

In well-characterised species of the Rhodobacter (Rba.) genus of purple photosynthetic bacteria it is known that the photochemical reaction centre (RC) is intimately-associated with an encircling LH1 antenna pigment protein, and this LH1 antenna is prevented from completely surrounding the RC by a single copy of the PufX protein. In Rba. veldkampii only monomeric RC-LH1 complexes are assembled in the photosynthetic membrane, whereas in Rba. sphaeroides and Rba. blasticus a dimeric form is also assembled in which two RCs are surrounded by an S-shaped LH1 antenna. The present work established that dimeric RC-LH1 complexes can also be isolated from Rba. azotoformans and Rba. changlensis, but not from Rba. capsulatus or Rba. vinaykumarii. The compositions of the monomers and dimers isolated from these four species of Rhodobacter were similar to those of the well-characterised RC-LH1 complexes present in Rba. sphaeroides. Pigment proteins were also isolated from strains of Rba. sphaeroides expressing chimeric RC-LH1 complexes. Replacement of either the Rba. sphaeroides LH1 antenna or PufX with its counterpart from Rba. capsulatus led to a loss of the dimeric form of the RC-LH1 complex, but the monomeric form had a largely unaltered composition, even in strains in which the expression level of LH1 relative to the RC was reduced. The chimeric RC-LH1 complexes were also functional, supporting bacterial growth under photosynthetic conditions. The findings help to tease apart the different functions of PufX in different species of Rhodobacter, and a specific protein structural arrangement that allows PufX to fulfil these three functions is proposed.


Assuntos
Proteínas de Bactérias/fisiologia , Complexos de Proteínas Captadores de Luz/fisiologia , Complexo de Proteínas do Centro de Reação Fotossintética/metabolismo , Complexo de Proteínas do Centro de Reação Fotossintética/fisiologia , Rhodobacter/metabolismo , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Regulação Bacteriana da Expressão Gênica , Complexos de Proteínas Captadores de Luz/química , Complexos de Proteínas Captadores de Luz/genética , Complexos de Proteínas Captadores de Luz/metabolismo , Modelos Moleculares , Organismos Geneticamente Modificados , Peptídeos/química , Peptídeos/metabolismo , Fotossíntese/genética , Fotossíntese/fisiologia , Complexo de Proteínas do Centro de Reação Fotossintética/análise , Complexo de Proteínas do Centro de Reação Fotossintética/química , Domínios e Motivos de Interação entre Proteínas , Multimerização Proteica/genética , Multimerização Proteica/fisiologia , Estrutura Quaternária de Proteína , Rhodobacter/genética , Rhodobacter/fisiologia , Rhodobacter capsulatus/genética , Rhodobacter capsulatus/metabolismo , Rhodobacter capsulatus/fisiologia , Rhodobacter sphaeroides/genética , Rhodobacter sphaeroides/metabolismo , Rhodobacter sphaeroides/fisiologia , Especificidade da Espécie
15.
PLoS One ; 6(5): e19646, 2011 May 04.
Artigo em Inglês | MEDLINE | ID: mdl-21573194

RESUMO

The long-range movement of Rhodobacter capsulatus cells in the glass-agar interstitial region of borosilicate Petri plates was found to be due to a subset of the cells inoculated into plates. The macroscopic appearance of plates indicated that a small group of cells moved in a coordinated manner to form a visible satellite cluster of cells. Satellite clusters were initially separated from the point of inoculation by the absence of visible cell density, but after 20 to 24 hours this space was colonized by cells apparently shed from a group of cells moving away from the point of inoculation. Cell movements consisted of flagellum-independent and flagellum-dependent motility contributions. Flagellum-independent movement occurred at an early stage, such that satellite clusters formed after 12 to 24 hours. Subsequently, after 24 to 32 hours, a flagellum-dependent dispersal of cells became visible, extending laterally outward from a line of flagellum-independent motility. These modes of taxis were found in several environmental isolates and in a variety of mutants, including a strain deficient in the production of the R. capsulatus acyl-homoserine lactone quorum-sensing signal. Although there was great variability in the direction of movement in illuminated plates, cells were predisposed to move toward broad spectrum white light. This predisposition was increased by the use of square plates, and a statistical analysis indicated that R. capsulatus is capable of genuine phototaxis. Therefore, the variability in the direction of cell movement was attributed to optical effects on light waves passing through the plate material and agar medium.


Assuntos
Fotossíntese/fisiologia , Rhodobacter capsulatus/citologia , Rhodobacter capsulatus/fisiologia , Ágar/farmacologia , Contagem de Colônia Microbiana , Flagelos/efeitos dos fármacos , Flagelos/metabolismo , Flagelos/efeitos da radiação , Luz , Movimento/efeitos dos fármacos , Movimento/fisiologia , Movimento/efeitos da radiação , Mutação/genética , Fenótipo , Fotossíntese/efeitos dos fármacos , Fotossíntese/efeitos da radiação , Rhodobacter capsulatus/crescimento & desenvolvimento , Rhodobacter capsulatus/isolamento & purificação
16.
Curr Microbiol ; 62(2): 391-5, 2011 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-20697715

RESUMO

In a previous study, we evaluated the effects of inoculating rice plants with the phototrophic purple nonsulfur bacterium Rhodobacter capsulatus (Rc) on growth and yield of rice in pots and lysimeter experiments and the results obtained have been highly encouraging. In this study, we carried out two field experiments: one in the experimental farm of the Faculty of Agriculture, Fayoum University, and the second in a farmer's field in Kafr El-sheikh, to assess the effects of Rc on growth and yield of rice in comparison and in combination with chemical nitrogen fertilizer (CNF) and farmyard manure. The results indicated that both biological and grain yields in all the Rc inoculated treatments were significantly higher than those in the uninoculated corresponding treatments in both fields. With regard to grain yield, the major factor for determining the effectiveness of any agricultural treatment, inoculation with Rc in combination with 50% of the recommended CNF rate gave a grain yield that was statistically equivalent to that obtained with 100% of the recommended CNF rate. These results provide a clear evidence for the potential of Rc as biofertilizer for flooded rice under field conditions.


Assuntos
Agricultura/métodos , Fertilizantes , Oryza/crescimento & desenvolvimento , Oryza/microbiologia , Rhodobacter capsulatus/fisiologia , Grão Comestível/crescimento & desenvolvimento , Esterco
17.
Adv Exp Med Biol ; 675: 253-64, 2010.
Artigo em Inglês | MEDLINE | ID: mdl-20532745

RESUMO

When Rhodobacter capsulatus cultures enter the stationary phase of growth, particles of the gene transfer agent (RcGTA) are released from cells. The morphology of RcGTA resembles that of a small, tailed bacteriophage, with a protein capsid surrounding a ~4 kb linear, double-stranded fragment of DNA. However, the DNA present consists of random segments of the R. capsulatus genome, which may be transferred to another strain of R. capsulatus. The recipient in RcGTA-mediated gene transduction may acquire new alleles and thus express a new phenotype. The genes encoding the structural proteins of the RcGTA are clustered on the R. capsulatus chromosome, whereas genes that encode proteins that regulate the production of RcGTA are scattered around the chromosome. These regulatory proteins include a homoserine lactone synthase (GtaI) that produces a quorum-sensing signal, a two-component sensor-kinase protein (CckA), and a two-component response regulator protein (CtrA). We review the proposed evolutionary origin of RcGTA, as well as environmental and cellular factors involved in the induction of this unusual process of genetic exchange.


Assuntos
Transferência Genética Horizontal , Genes Bacterianos/fisiologia , Rhodobacter capsulatus/fisiologia , Filogenia
18.
Appl Environ Microbiol ; 75(21): 6639-46, 2009 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-19717624

RESUMO

Diverse bacteria are known to oxidize millimolar concentrations of ferrous iron [Fe(II)] under anaerobic conditions, both phototrophically and chemotrophically. Yet whether they can do this under conditions that are relevant to natural systems is understood less well. In this study, we tested how light, Fe(II) speciation, pH, and salinity affected the rate of Fe(II) oxidation by Rhodobacter capsulatus SB1003. Although R. capsulatus cannot grow photoautotrophically on Fe(II), it oxidizes Fe(II) at rates comparable to those of bacteria that do grow photoautotrophically on Fe(II) as soon as it is exposed to light, provided it has a functional photosystem. Chelation of Fe(II) by diverse organic ligands promotes Fe(II) oxidation, and as the pH increases, so does the oxidation rate, except in the presence of nitrilotriacetate; nonchelated forms of Fe(II) are also more rapidly oxidized at higher pH. Salt concentrations typical of marine environments inhibit Fe(II) oxidation. When growing photoheterotrophically on humic substances, R. capsulatus is highly sensitive to low concentrations of Fe(II); it is inhibited in the presence of concentrations as low as 5 microM. The product of Fe(II) oxidation, ferric iron, does not hamper growth under these conditions. When other parameters, such as pH or the presence of chelators, are adjusted to promote Fe(II) oxidation, the growth inhibition effect of Fe(II) is alleviated. Together, these results suggest that Fe(II) is toxic to R. capsulatus growing under strictly anaerobic conditions and that Fe(II) oxidation alleviates this toxicity.


Assuntos
Compostos Ferrosos/metabolismo , Inibidores do Crescimento/metabolismo , Luz , Desintoxicação Metabólica Fase I , Rhodobacter capsulatus/fisiologia , Anaerobiose , Compostos Ferrosos/farmacologia , Inibidores do Crescimento/farmacologia , Substâncias Húmicas , Concentração de Íons de Hidrogênio , Oxirredução , Rhodobacter capsulatus/metabolismo , Cloreto de Sódio/metabolismo
19.
Photosynth Res ; 95(2-3): 279-84, 2008.
Artigo em Inglês | MEDLINE | ID: mdl-17922301

RESUMO

Rhodobacter capsulatus contains lhaA and pucC genes that have been implicated in light-harvesting complex 1 and 2 (LH1 and LH2) assembly. The proteins encoded by these genes, and homologues in other photosynthetic organisms, have been classified as the bacteriochlorophyll delivery (BCD) family of the major facilitator superfamily. A new BCD family phylogenetic tree reveals that several PucC, LhaA and Orf428-related sequences each form separate clusters, while plant and cyanobacterial homologues cluster more distantly. The PucC protein is encoded in the pucBACDE superoperon which also codes for LH2 alpha (PucA) and beta (PucB) proteins. PucC was previously shown to be necessary for formation of LH2. This article gives evidence indicating that PucC has a shepherding activity that keeps the homologous alpha and beta proteins of LH1 and LH2 apart, allowing LH1 to assemble properly. This shepherding function was indicated by a 62% reduction in LH1 levels in DeltaLHII strains carrying plasmids encoding pucBA along with a C-terminally truncated pucC gene. More severe reductions in LH1 were seen when the truncated pucC gene was co-expressed in the presence of C-terminal PucC::PhoA fusion proteins. It appears that interaction between truncated PucC::PhoA fusion proteins and the truncated PucC protein disrupts LH1 assembly, pointing towards a PucC dimeric or multimeric functional unit.


Assuntos
Proteínas de Bactérias/fisiologia , Complexos de Proteínas Captadores de Luz/fisiologia , Complexo de Proteína do Fotossistema II/fisiologia , Rhodobacter capsulatus/fisiologia , Proteínas de Bactérias/classificação , Complexo de Proteína do Fotossistema II/classificação , Filogenia
20.
J Bacteriol ; 190(2): 487-93, 2008 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-17981966

RESUMO

Rhodobacter capsulatus can efficiently grow with taurine as the sole sulfur source. The products of the tpa-tauR-xsc gene region are essential for this activity. TauR, a MocR-like member of the GntR superfamily of transcriptional regulators, activates tpa transcription, as shown by analysis of wild-type and tauR mutant strains carrying a tpa-lacZ reporter fusion. Activation of the tpa promoter requires taurine but is not inhibited by sulfate, which is the preferred sulfur source. TauR directly binds to the tpa promoter, as demonstrated by DNA mobility shift assays. As expected for a transcriptional activator, the TauR binding site is located upstream of the transcription start site, which has been determined by primer extension. Site-directed promoter mutations reveal that TauR binds to direct repeats, an unusual property that has to date been shown for only one other member of the MocR subfamily, namely, GabR from Bacillus subtilis. In contrast, all other members of the GntR family analyzed so far bind to inverted repeats.


Assuntos
Proteínas de Bactérias/biossíntese , Regulação Bacteriana da Expressão Gênica/fisiologia , Proteínas de Membrana Transportadoras/biossíntese , Rhodobacter capsulatus/fisiologia , Taurina/metabolismo , Transativadores/fisiologia , Fusão Gênica Artificial , Sítios de Ligação , DNA Bacteriano/metabolismo , Genes Reporter , Mutagênese Sítio-Dirigida , Regiões Promotoras Genéticas , Ligação Proteica , Transativadores/genética , Transaminases/biossíntese
SELEÇÃO DE REFERÊNCIAS
DETALHE DA PESQUISA
...