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1.
Genes (Basel) ; 12(11)2021 11 05.
Artigo em Inglês | MEDLINE | ID: mdl-34828370

RESUMO

Sanguisorba, commonly known as burnet, is a genus in the family Rosaceae native to the temperate regions of the Northern hemisphere. Five of its thirty species are distributed in Korea: Sanguisorba officinalis, S. stipulata, S. hakusanensis, S. longifolia, and S. tenuifolia. S. officinalis has been designated as a medicinal remedy in the Chinese and Korean Herbal Pharmacopeias. Despite being a valuable medicinal resource, the morphological and genomic information, as well as the genetic characteristics of Sanguisorba, are still elusive. Therefore, we carried out the first comprehensive study on the floral micromorphology, palynology, and complete chloroplast (cp) genome of the Sanguisorba species. The outer sepal waxes and hypanthium characters showed diagnostic value, despite a similar floral micromorphology across different species. All the studied Sanguisorba pollen were small to medium, oblate to prolate-spheroidal, and their exine ornamentation was microechinate. The orbicules, which are possibly synapomorphic, were consistently absent in this genus. Additionally, the cp genomes of S. officinalis, S. stipulata, and S. hakusanensis have been completely sequenced. The comparative analysis of the reported Sanguisorba cp genomes revealed local divergence regions. The nucleotide diversity of trnH-psbA and rps2-rpoC2, referred to as hotspot regions, revealed the highest pi values in six Sanguisorba. The ndhG indicated positive selection pressures as a species-specific variation in S. filiformis. The S. stipulata and S. tenuifolia species had psbK genes at the selected pressures. We developed new DNA barcodes that distinguish the typical S. officinalis and S. officinalis var. longifolia, important herbal medicinal plants, from other similar Sanguisorba species with species-specific distinctive markers. The phylogenetic trees showed the positions of the reported Sanguisorba species; S. officinalis, S. tenuifolia, and S. stipulata showed the nearest genetic distance. The results of our comprehensive study on micromorphology, pollen chemistry, cp genome analysis, and the development of species identification markers can provide valuable information for future studies on S. officinalis, including those highlighting it as an important medicinal resource.


Assuntos
Cloroplastos/genética , Código de Barras de DNA Taxonômico/métodos , Flores/anatomia & histologia , Sanguisorba/classificação , Flores/classificação , Flores/genética , Marcadores Genéticos , Tamanho do Genoma , Genoma de Cloroplastos , Filogenia , Pólen/anatomia & histologia , Pólen/classificação , Pólen/genética , Sanguisorba/anatomia & histologia , Sanguisorba/genética , Seleção Genética , Análise de Sequência de DNA , Especificidade da Espécie
2.
Molecules ; 23(9)2018 Aug 24.
Artigo em Inglês | MEDLINE | ID: mdl-30149578

RESUMO

The genus Sanguisorba, which contains about 30 species around the world and seven species in China, is the source of the medicinal plant Sanguisorba officinalis, which is commonly used as a hemostatic agent as well as to treat burns and scalds. Here we report the complete chloroplast (cp) genome sequences of four Sanguisorba species (S. officinalis, S. filiformis, S. stipulata, and S. tenuifolia var. alba). These four Sanguisorba cp genomes exhibit typical quadripartite and circular structures, and are 154,282 to 155,479 bp in length, consisting of large single-copy regions (LSC; 84,405⁻85,557 bp), small single-copy regions (SSC; 18,550⁻18,768 bp), and a pair of inverted repeats (IRs; 25,576⁻25,615 bp). The average GC content was ~37.24%. The four Sanguisorba cp genomes harbored 112 different genes arranged in the same order; these identical sections include 78 protein-coding genes, 30 tRNA genes, and four rRNA genes, if duplicated genes in IR regions are counted only once. A total of 39⁻53 long repeats and 79⁻91 simple sequence repeats (SSRs) were identified in the four Sanguisorba cp genomes, which provides opportunities for future studies of the population genetics of Sanguisorba medicinal plants. A phylogenetic analysis using the maximum parsimony (MP) method strongly supports a close relationship between S. officinalis and S. tenuifolia var. alba, followed by S. stipulata, and finally S. filiformis. The availability of these cp genomes provides valuable genetic information for future studies of Sanguisorba identification and provides insights into the evolution of the genus Sanguisorba.


Assuntos
Genoma de Cloroplastos , Sanguisorba/classificação , Sanguisorba/genética , Composição de Bases , Códon , Biologia Computacional/métodos , Éxons , Variação Genética , Genômica/métodos , Íntrons , Repetições de Microssatélites , Anotação de Sequência Molecular , Filogenia
3.
Plant Biol (Stuttg) ; 19(4): 562-570, 2017 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-28387987

RESUMO

Calcareous grasslands belong to the most species-rich and endangered habitats in Europe. However, little is known about the origin of the species typically occurring in these grasslands. In this study we analysed the glacial and post-glacial history of Sanguisorba minor, a typical plant species frequently occurring in calcareous grasslands. The study comprised 38 populations throughout the whole distribution range of the species across Europe. We used molecular markers (AFLP) and applied Bayesian cluster analysis as well as spatial principal components analysis (sPCA) to identify glacial refugia and post-glacial migration routes to Central Europe. Our study revealed significant differences in the level of genetic variation and the occurrence of rare fragments within populations of S. minor and a distinct separation of eastern and western lineages. The analyses uncovered traditional southern but also cryptic northern refugia and point towards a broad fronted post-glacial recolonisation. Based on these results we postulate that incomplete lineage sorting may have contributed to the detected pattern of genetic variation and that S. minor recolonised Central Europe post-glacially from Iberia and northern glacial refugia in France, Belgium or Germany. Our results highlight the importance of refugial areas for the conservation of intraspecific variation in calcareous grassland species.


Assuntos
Pradaria , Refúgio de Vida Selvagem , Sanguisorba/genética , Análise do Polimorfismo de Comprimento de Fragmentos Amplificados , Teorema de Bayes , Filogeografia , Análise de Componente Principal , Sanguisorba/classificação
4.
Zhongguo Zhong Yao Za Zhi ; 24(12): 715-7, 762, 1999 Dec.
Artigo em Chinês | MEDLINE | ID: mdl-12205978

RESUMO

OBJECTIVE: To approach a new evidence for identifying various species of Rosaceae Sanguisorba, especially for distinguishing S. applanata from S. sitchinese. METHOD: The pollens of five species S. officinalis, S. officinalis var. longifolia, S. applanata, S. applanata var. villosa and S. sitchinese were morphologically identified with electron microscope. RESULTS: The pollens are prolate or perprolate, having six colporates and featuring sculptures of small caverns and small granules combined. The species are closed to each other in pollen morphology, bur display differences in the diameter of pollens, clarity of pore membrane and presence or absence of irregular verrucous sculptures. CONCLUSION: This paper provides a new evidence for identifying the Sanguisorba.


Assuntos
Plantas Medicinais , Pólen/ultraestrutura , Sanguisorba , Microscopia Eletrônica de Varredura , Farmacognosia , Plantas Medicinais/classificação , Plantas Medicinais/ultraestrutura , Sanguisorba/classificação , Sanguisorba/ultraestrutura
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