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1.
Mycopathologia ; 189(3): 43, 2024 May 06.
Artigo em Inglês | MEDLINE | ID: mdl-38709328

RESUMO

During an epidemiological survey, a potential novel species within the basidiomycetous yeast genus Trichosporon was observed. The clinical strain was obtained from a urine sample taken from a Brazilian kidney transplant recipient. The strain was molecularly identified using the intergenic spacer (IGS1) ribosomal DNA locus and a subsequent phylogenetic analysis showed that multiple strains that were previously reported by other studies shared an identical IGS1-genotype most closely related to that of Trichosporon inkin. However, none of these studies provided an in-depth characterization of the involved strains to describe it as a new taxon. Here, we present the novel clinically relevant yeast for which we propose the name Trichosporon austroamericanum sp. nov. (holotype CBS H-24937). T. austroamericanum can be distinguished from other siblings in the genus Trichosporon using morphological, physiological, and phylogenetic characters.


Assuntos
DNA Fúngico , DNA Espaçador Ribossômico , Filogenia , Análise de Sequência de DNA , Transplantados , Trichosporon , Tricosporonose , Trichosporon/classificação , Trichosporon/genética , Trichosporon/isolamento & purificação , DNA Espaçador Ribossômico/genética , DNA Espaçador Ribossômico/química , DNA Fúngico/genética , Humanos , Brasil , Tricosporonose/microbiologia , Análise por Conglomerados , Técnicas de Tipagem Micológica , Transplante de Rim , Microscopia , Genótipo
2.
Mycopathologia ; 188(3): 243-249, 2023 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-37067663

RESUMO

Trichosporon asteroides is an emerging yeast-like pathogen commonly misidentified by commercial biochemical identification systems. We evaluated the performance of matrix-assisted laser desorption/ionization time-of-flight mass spectrometry for the identification of 21 clinical T. asteroides strains using the Bruker Daltonics database (BDAL) and an in-house developed library. Mass spectra were obtained by the FlexControl system v.3.4, and characterizations were performed in the Biotyper BDAL database v.4.1 and the developed in-house library. Species identification for T. asteroides failed as all 21 strains were misidentified as T. japonicum (log-scores 1.89-2.19). Extending the existing database was crucial to achieving 100% correct species-level identification and accurate distinction between species. Our results indicate that the commercial BDAL database has no discriminatory power to distinguish between T. japonicum and T. asteroides. Whereas improvement of the current BDAL database is pending, we strongly advise system users not to exclude the possibility of the failure to report T. asteroides.


Assuntos
Técnicas de Tipagem Micológica , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Trichosporon , Tricosporonose , Humanos , Bases de Dados Factuais , Especificidade da Espécie , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Trichosporon/classificação , Trichosporon/isolamento & purificação , Tricosporonose/diagnóstico , Tricosporonose/microbiologia , Técnicas de Tipagem Micológica/métodos
3.
Mycoses ; 64(8): 918-925, 2021 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-33998718

RESUMO

BACKGROUND: Trichosporonosis is an emerging fungal infection caused by Trichosporon species, a genus of yeast-like fungi, which are frequently encountered in human infections ranging from mild cutaneous lesions to fungemia in immunocompromised patients. The incidence of trichosporonosis has increased in recent years, owing to higher numbers of individuals at risk for this infection. Although amphotericin B, posaconazole and isavuconazole are generally effective against Trichosporon species, some isolates may have variable susceptibility to these antifungals. OBJECTIVES: Herein, we evaluated the species distribution, genetic diversity and antifungal susceptibility profiles of Trichosporon isolates in Iran. METHODS: The yeasts were identified by matrix-assisted laser desorption/ionisation time-of-flight mass spectrometry (MALDI-TOF MS). Phylogenetic analysis was performed based on amplified fragment length polymorphism (AFLP). The in vitro susceptibilities of eight antifungal agents were analysed using the Clinical and Laboratory Standards Institute broth microdilution methods. RESULTS: The isolates belonged to the species T asahii (n = 20), T japonicum (n = 4) and T faecale (n = 3). A dendrogram of the AFLP analysis demonstrated that T asahii and non-asahii Trichosporon strains (T japonicum and T faecale) are phylogenetically distinct. While voriconazole was the most active agent (GM MIC = 0.075 µg/ml), high fluconazole MICs (8 µg/ml) were observed for a quarter of Trichosporon isolates. The GM MIC value of amphotericin B for T asahii and non-asahii Trichosporon species was 0.9 µg/ml. CONCLUSIONS: The distribution and antifungal susceptibility patterns of the identified Trichosporon species could inform therapeutic choices for treating these emerging life-threatening fungi.


Assuntos
Antifúngicos/farmacologia , Farmacorresistência Fúngica , Variação Genética , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz/métodos , Trichosporon/efeitos dos fármacos , Trichosporon/genética , Tricosporonose/microbiologia , Humanos , Irã (Geográfico)/epidemiologia , Testes de Sensibilidade Microbiana , Filogenia , Trichosporon/classificação , Tricosporonose/epidemiologia
4.
Sci Rep ; 10(1): 2780, 2020 02 17.
Artigo em Inglês | MEDLINE | ID: mdl-32066798

RESUMO

Trichosporonaceae incorporates six genera of physiologically and ecologically diverse fungi including both human pathogenic taxa as well as yeasts of biotechnological interest, especially those oleagenic taxa that accumulate large amounts of single cell oils (SCOs). Here, we have undertaken comparative genomic analysis of thirty-three members of the family with a view to gain insight into the molecular determinants underlying their lifestyles and niche specializations. Phylogenomic analysis revealed potential misidentification of three strains which could impact subsequent analyses. Evaluation of the predicted proteins coding sequences showed that the free-living members of the family harbour greater numbers of carbohydrate active enzymes (CAZYmes), metallo- and serine peptidases compared to their host-associated counterparts. Phylogenies of selected lipid biosynthetic enzymes encoded in the genomes of the studied strains revealed disparate evolutionary histories for some proteins inconsistent with the core genome phylogeny. However, the documented oleagenic members distinctly cluster based on the constitution of the upstream regulatory regions of genes encoding acetyl-CoA carboxylase (ACC), ATP-citrate synthase (ACS) and isocitrate dehydrogenase [NADP] (ICDH), which are among the major proteins in the lipid biosynthetic pathway of these yeasts, suggesting a possible pattern in the regulation of these genes.


Assuntos
Fungos/genética , Genoma Fúngico/genética , Genômica , Trichosporon/genética , Animais , Metabolismo dos Carboidratos/genética , Carboidratos/genética , Fungos/classificação , Fungos/patogenicidade , Fungos/fisiologia , Humanos , Filogenia , Trichosporon/classificação , Trichosporon/patogenicidade , Trichosporon/fisiologia
5.
Med Mycol J ; 60(2): 51-57, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31155572

RESUMO

Many nomenclatural changes, including proposals of new taxa, have been carried out in fungi to adapt to the "One fungus = One name" (1F=1N) principle. In yeasts, while some changes have been made in response to 1F=1N, most have resulted from two other factors: i) an improved understanding of biological diversity due to an increase in number of known species, and ii) progress in the methods for analyzing and evaluating biological diversity. The method for constructing a backbone tree, which is a basal tree used to infer phylogeny, has also progressed from single-gene trees to multi-locus trees and further, to genome trees. This paper describes recent advances related to the contribution of genomic data to taxonomy, using the order Trichosporonales as an example.


Assuntos
Classificação/métodos , Genoma Fúngico/genética , Genômica/métodos , Filogenia , Trichosporon/classificação , Trichosporon/genética , Biodiversidade
6.
BMC Microbiol ; 19(1): 113, 2019 05 28.
Artigo em Inglês | MEDLINE | ID: mdl-31138125

RESUMO

BACKGROUND: Trichosporon is the dominant genus of epidermal fungi in giant pandas (Ailuropoda melanoleuca) and causes local and deep infections. To provide the information needed for the diagnosis and treatment of trichosporosis in giant pandas, the sequence of ITS, D1/D2, and IGS1 loci in 29 isolates of Trichosporon spp. which were isolated from the body surface of giant pandas were combination to investigate interspecies identification and genotype. Morphological development was examined via slide culture. Additionally, mice were infected by skin inunction, intraperitoneal injection, and subcutaneous injection for evaluation of pathogenicity. RESULTS: The twenty-nine isolates of Trichosporon spp. were identified as 11 species, and Trichosporon jirovecii and T. asteroides were the commonest species. Four strains of T. laibachii and one strain of T. moniliiforme were found to be of novel genotypes, and T. jirovecii was identified to be genotype 1. T. asteroides had the same genotype which involved in disseminated trichosporosis. The morphological development processes of the Trichosporon spp. were clearly different, especially in the processes of single-spore development. Pathogenicity studies showed that 7 species damaged the liver and skin in mice, and their pathogenicity was stronger than other 4 species. T. asteroides had the strongest pathogenicity and might provoke invasive infection. The pathological characteristics of liver and skin infections caused by different Trichosporon spp. were similar. CONCLUSIONS: Multiple species of Trichosporon were identified on the skin surface of giant panda, which varied in morphological development and pathogenicity. Combination of ITS, D1/D2, and IGS1 loci analysis, and morphological development process can effectively identify the genotype of Trichosporon spp.


Assuntos
DNA Fúngico/genética , Trichosporon/classificação , Trichosporon/patogenicidade , Tricosporonose/microbiologia , Ursidae/microbiologia , Animais , Feminino , Técnicas de Genotipagem , Fígado/microbiologia , Masculino , Camundongos , Filogenia , Pele/microbiologia , Especificidade da Espécie , Trichosporon/genética , Trichosporon/isolamento & purificação
7.
Fungal Genet Biol ; 130: 31-42, 2019 09.
Artigo em Inglês | MEDLINE | ID: mdl-31026590

RESUMO

Delineation and characterization of genera in Trichosporonales (Agaricomycotina, Basidiomycota) was performed using 24 haploid and 3 naturally occurring hybrid genomes, with 3 Tremellales genomes used as outgroups. Orthologous group analysis of those genomes showed presence-absence patterns of orthologs that were consistent with the genus classifications. Many shared unique orthologs were identified in the well-supported lineages (genera Apiotrichum and Trichosporon), supporting the definitions of the genera Apiotrichum and Trichosporon from a genomic perspective. Specifically, we obtained 24 and 285 genus-specific genes from eight Apiotrichum and five Trichosporon species, respectively, and propose that these genus-specific genes can be used for delineation of those genera. On the other hand, the genus Cutaneotrichosporon shared only one genus-specific gene among eight genomes, indicating that this genus definition might require re-examination based on genomic data. In addition, taxonomic revisions are presented in this study, including the proposal of two genera, Pascua and Prillingera. Because genomic data can be systematically obtained and analyzed to compare species from a comprehensive viewpoint, they can be used not only to reconstruct reliable phylogenetic trees, but also to re-examine the definitions of taxonomic classifications. To our knowledge, this is the first report to discuss the 'natural system' of genus level classification in fungi based on genomic data.


Assuntos
Basidiomycota/classificação , Basidiomycota/genética , Genoma Fúngico , Genômica , Filogenia , Basidiomycota/isolamento & purificação , Proteínas Fúngicas/genética , Genes Fúngicos , Haploidia , Fenótipo , Análise de Sequência , Trichosporon/classificação , Trichosporon/genética , Ubiquinona
8.
Clin Microbiol Infect ; 25(7): 909.e1-909.e5, 2019 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-30991116

RESUMO

OBJECTIVES: To provide species distribution and antifungal susceptibility profiles of 358 Trichosporon clinical isolates collected from 24 tertiary-care hospitals. METHODS: Species identification was performed by sequencing the IGS1 region of rDNA. Antifungal susceptibility testing for amphotericin B, fluconazole, voriconazole and posaconazole followed the Clinical and Laboratory Standards Institute reference method. Tentative epidemiologic cutoff values (97.5% ECVs) of antifungals for Trichosporon asahii were also calculated. RESULTS: Isolates were cultured mostly from urine (155/358, 43.3%) and blood (82/358, 23%) samples. Trichosporon asahii was the most common species (273/358, 76.3%), followed by T. inkin (35/358, 9.7%). Isolation of non-T. asahii species increased substantially over the last 11 years [11/77 (14.2%) from 1997 to 2007 vs. 74/281, (26.3%) from 2008 to 2018, p0.03]. Antifungal susceptibility testing showed high amphotericin B minimum inhibitory concentrations against Trichosporon isolates, with higher values for T. faecale. The ECV for amphotericin B and T. asahii was set at 4 µg/mL. Among the triazole derivatives, fluconazole was the least active drug. The ECVs for fluconazole and posaconazole against T. asahii were set at 8 and 0.5 µg/mL, respectively. Voriconazole showed the strongest in vitro activity against the Trichosporon isolates; its ECV for T. asahii was set at 0.25 µg/mL after 48 hours' incubation. CONCLUSIONS: Trichosporon species diversity has increased over the years in human samples, and antifungal susceptibility profiles were species specific. Trichosporon asahii antifungal ECVs were proposed, which may be helpful to guide antifungal therapy.


Assuntos
Antifúngicos/farmacologia , Farmacorresistência Fúngica , Trichosporon/classificação , Trichosporon/efeitos dos fármacos , Anfotericina B/farmacologia , Brasil , DNA Fúngico/genética , DNA Ribossômico/genética , Fluconazol/farmacologia , Humanos , Testes de Sensibilidade Microbiana , Técnicas de Tipagem Micológica , Centros de Atenção Terciária , Tricosporonose/microbiologia , Voriconazol/farmacologia
9.
J Mycol Med ; 29(2): 120-126, 2019 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-30898449

RESUMO

Apiotrichum mycotoxinivorans (formerly Trichosporon mycotoxinivorans) has long been used to degrade fungal toxins in livestock feed. However, clinic reports about this type of fungus are rare. In this study, we report the morphology, biochemistry, and molecular characteristics of an A. mycotoxinivorans strain isolated from a pediatric patient with congenital ventricular septal defect and pneumonia. A female patient, 26 months old, presented with congenital ventricular septal defect. Pulmonary infection symptoms were observed after the patient received cardiac repair surgery. Sputum bacterial and fungal cultures were positive for Elizabethkingia anophelis and a fungus, which was not readily identifiable using biochemical identification, or MALDI-TOF MS analysis. The strain was finally identified as A. mycotoxinivorans using amplification and sequencing of the D1/D2 region of 26S rDNA, ITS, and IGS1. Antifungal susceptibility test results suggested that fluconazole or voriconazole may be an appropriate choice for antifungal therapy. A biodegradability of ochratoxin A was considered as a characteristic of the fungal strain. Our results support the existing evidence that A. mycotoxinivorans is an opportunistic pathogen for human beings. Nucleic acid analysis allows for the accurate identification of the species in instances where conventional identification methods such as biochemical testing and MALDI-TOF MS may be unsuccessful.


Assuntos
Pneumonia/microbiologia , Escarro/microbiologia , Trichosporon/classificação , Trichosporon/isolamento & purificação , Tricosporonose/diagnóstico , Antifúngicos/farmacologia , Pré-Escolar , DNA Fúngico/genética , Feminino , Humanos , Técnicas de Tipagem Micológica , Filogenia , Trichosporon/efeitos dos fármacos , Tricosporonose/microbiologia
10.
J Clin Microbiol ; 57(2)2019 02.
Artigo em Inglês | MEDLINE | ID: mdl-30463892

RESUMO

A total of 133 clinical Trichosporon isolates were collected in the National China Hospital Invasive Fungal Surveillance Net (CHIF-NET) program in 2009 to 2016. Accurate identification was performed by sequencing of the intergenic spacer 1 (IGS1) region. Among these isolates, Trichosporon asahii (108 isolates [81.2%]) was the leading species, followed by Trichosporon dermatis (7 isolates [5.3%]), Trichosporon asteroides (5 isolates [3.8%]), Trichosporon inkin (5 isolates [3.8%]), Trichosporon dohaense (3 isolates [2.3%]), and 1 isolate (0.7%) each of Trichosporon faecale, Trichosporon jirovecii, Trichosporon mucoides, Trichosporon coremiiforme, and Trichosporon montevideense Both the Vitek mass spectrometry (MS) (bioMérieux, Marcy l'Etoile, France) and Bruker Biotyper MS (Bruker Daltonics GmbH, Germany) platforms gave high levels (>97.5%) of correct identification when the species were present in the database. The geometric mean (GM) of amphotericin B MICs for T. asahii was 2-fold higher than that for non-asahii Trichosporon High fluconazole MICs (≥8 µg/ml) were observed for 25% of T. asahii isolates (27/108 isolates) and 16% of non-asahii Trichosporon (4/25 isolates) isolates. Itraconazole MICs were ≤0.5 µg/ml for 89.5% of the isolates. Voriconazole was the most potent antifungal agent in vitro, with a GM of 0.09 µg/ml. Genotyping of the isolates using IGS1 sequence alignment revealed that genotype 1 was most common (41.7%), followed by genotype 4 (31.5%), genotype 3 (23.1%), genotype 5 (0.9%), genotype 6 (0.9%), and genotype 7 (1.8%). Our data on species distribution, genotypes, and antifungal susceptibilities may contribute to a better understanding of the epidemiology of invasive Trichosporon infections throughout China.


Assuntos
Antifúngicos/farmacologia , Genótipo , Infecções Fúngicas Invasivas/epidemiologia , Trichosporon/isolamento & purificação , Tricosporonose/epidemiologia , Adolescente , Adulto , Idoso , Idoso de 80 Anos ou mais , Criança , Pré-Escolar , China/epidemiologia , DNA Fúngico/química , DNA Fúngico/genética , DNA Ribossômico/química , DNA Ribossômico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Feminino , Técnicas de Genotipagem , Humanos , Lactente , Recém-Nascido , Infecções Fúngicas Invasivas/microbiologia , Masculino , Técnicas Microbiológicas , Pessoa de Meia-Idade , Estudos Prospectivos , Análise de Sequência de DNA , Trichosporon/classificação , Trichosporon/efeitos dos fármacos , Trichosporon/genética , Tricosporonose/microbiologia , Adulto Jovem
11.
J Fish Dis ; 41(11): 1719-1732, 2018 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-30255599

RESUMO

One hundred and twenty-nine isolates of Trichosporon jirovecii were isolated from the melanized exoskeleton as well as eyestalks, gills, muscle and haemolymph of red swamp crayfish (Procambarus clarkii) collected from the River Nile, during summer 2015. Isolates were similar morphologically, biochemically and genetically. Also, random amplified polymorphic DNA (RAPD) analysis exhibited no polymorphism among the tested isolates. Virulence factors such as chitinase, protease, lipase activities and biofilm formation were examined. Challenge test, using a representative isolate (Tj_ASU8), proved its pathogenicity against crayfish. Magnesium oxide nanoparticles had a good antifungal activity with a minimum fungicidal concentration of 8 mg/ml. To the best of our knowledge, this is the first report for isolation of T. jirovecii from red swamp crayfish, showing melanization, from the River Nile. We assume that infected crayfish may act as a vector for this fungus and can disseminate infection to all susceptible hosts in the vicinity.


Assuntos
Astacoidea/microbiologia , Trichosporon/classificação , Trichosporon/fisiologia , Animais , DNA Fúngico/análise , Filogenia , Análise de Sequência de DNA , Trichosporon/genética
12.
Fungal Biol ; 122(5): 283-292, 2018 05.
Artigo em Inglês | MEDLINE | ID: mdl-29665954

RESUMO

The increase of infections due to non-Candida albicans species made it very necessary to conduct adequate characterization to be able to identify the species of Candida isolated from traditional fermented foods. In this study, based on their hue on Candida Chromogenic Agar medium, a total of 136 yeast strains were isolated from tchapalo and bangui. Molecular identification based on PCR-RFLP of internal transcribed spacers of rDNA (ITS) and sequencing of the ITS and the D1/D2 regions allowed us to assign these isolates to seven species: Candida tropicalis, Candida inconspicua, Candida rugosa, Saccharomyces cerevisiae, Kluyveromyces marxianus, Hanseniaspora guilliermondii, Trichosporon asahii. With the respect to each beverage, six species were found among with four species are regarded as opportunistic pathogens. From these, C. tropicalis, C. inconspicua and K. marxianus were the most commonly encountered. The enzyme activities of the potential pathogens assessed using API ZYM system showed that almost strains had esterase, esterase lipase, valine and cystine arylamidase, alpha chymotrypsin, alkaline phosphatase and naphthol phosphohydrolase activities. The activity of α-glucosidase was found only in C. tropicalis and C. inconspicua strains isolated from tchapalo while ß-glucosidase activity was found in all strains from tchapalo and only in C. inconspicua isolated from bangui.


Assuntos
Bebidas Alcoólicas/microbiologia , Saccharomycetales/classificação , Saccharomycetales/isolamento & purificação , Análise por Conglomerados , Côte d'Ivoire , DNA Fúngico/química , DNA Fúngico/genética , DNA Ribossômico/química , DNA Ribossômico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Enzimas/análise , Filogenia , Reação em Cadeia da Polimerase , Polimorfismo de Fragmento de Restrição , RNA Ribossômico/genética , Saccharomycetales/enzimologia , Saccharomycetales/genética , Análise de Sequência de DNA , Trichosporon/classificação , Trichosporon/genética , Trichosporon/isolamento & purificação
13.
Mycoses ; 61(8): 534-542, 2018 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-29500851

RESUMO

Dermatophytes are considered as the main pathogens responsible for onychomycosis, but recently successive isolations of yeast-like fungi from the infected nails has led to consider these also as primary agents of nail infections. Trichosporon species which are non-candidal, basidiomycetous, yeast-like, anamorphic fungi are commonly isolated from soil but they are also emerging as important etiological agents of onychomycosis. Three species of Trichosporon viz., T. asahii, T. asteroides and T. faecale were isolated from the infected nails of three female members of a family from district Doda of Jammu and Kashmir State. Among the isolated species of Trichosporon, T. asahii was recovered from the nail samples of all the three members, thus confirming its recognition as a main pathogenic species of onychomycosis. So far, there is no report of T. asteroides and T. faecale causing onychomycosis and hence they constitute new additions to the list of onychomycotic fungi. Some of the predisposing factors like low socio-economic condition, poor hygiene, frequent exposure of finger nails to water and dirt, climatic conditions and nail trauma were observed to be the main causes of nail infection in these patients. However, a link between the pathogenic genus and the genetic makeup of the patients is also probable.


Assuntos
Saúde da Família , Unhas/patologia , Onicomicose/diagnóstico , Onicomicose/patologia , Trichosporon/isolamento & purificação , Tricosporonose/diagnóstico , Tricosporonose/patologia , Adolescente , Adulto , Análise por Conglomerados , DNA Fúngico/química , DNA Fúngico/genética , DNA Ribossômico/química , DNA Ribossômico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Feminino , Genes de RNAr , Humanos , Índia , Técnicas Microbiológicas , Microscopia , Unhas/microbiologia , Filogenia , RNA Fúngico/genética , RNA Ribossômico 18S/genética , RNA Ribossômico 28S/genética , Análise de Sequência de DNA , Trichosporon/classificação , Trichosporon/genética
14.
Mycopathologia ; 183(3): 637-644, 2018 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-29196923

RESUMO

This report describes the isolation of two environmental fungi: Rhodotorula mucilaginosa and Trichosporon jirovecii accompanied by Pseudomonas aeruginosa and Escherichia coli from a dog with bronchotracheitis. All microorganisms were isolated routinely from a mucopurulent discharge, obtained during bronchoscopy from laryngotracheal area. The initial identification of yeasts was confirmed by API Candida and by molecular analysis of internal transcribed spacer region. Administered antimicrobial treatment with Marbofloxacin and Canizol has brought the improvement in the dogs' health status. The final results of control mycological culture were negative. Most probably underlying hypothyroidism and the use of steroids were the factors predisposing this patient to opportunistic infection of mixed aetiology. As far as we are concerned, this is the first case of dogs' respiratory tract infection caused by R. mucilaginosa and T. jirovecii.


Assuntos
Coinfecção/veterinária , Doenças do Cão/diagnóstico , Escherichia coli/isolamento & purificação , Pseudomonas aeruginosa/isolamento & purificação , Infecções Respiratórias/veterinária , Rhodotorula/isolamento & purificação , Trichosporon/isolamento & purificação , Animais , Antibacterianos/administração & dosagem , Antifúngicos/administração & dosagem , Broncoscopia , Análise por Conglomerados , Coinfecção/diagnóstico , Coinfecção/microbiologia , Coinfecção/patologia , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Fúngico/química , DNA Fúngico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Doenças do Cão/microbiologia , Doenças do Cão/patologia , Cães , Escherichia coli/classificação , Escherichia coli/genética , Feminino , Técnicas Microbiológicas , Filogenia , Pseudomonas aeruginosa/classificação , Pseudomonas aeruginosa/genética , Infecções Respiratórias/diagnóstico , Infecções Respiratórias/microbiologia , Infecções Respiratórias/patologia , Rhodotorula/classificação , Rhodotorula/genética , Análise de Sequência de DNA , Resultado do Tratamento , Trichosporon/classificação , Trichosporon/genética
15.
Mycopathologia ; 183(3): 585-590, 2018 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-29196924

RESUMO

Cutaneotrichosporon (Trichosporon) debeurmannianum is a rarely isolated yeast from clinical samples. Nine isolates of this yeast were identified from clinical samples within a period of 3 years from June 2012 to May 2015. These isolates were from blood and urine samples sent to a clinical mycology laboratory of a tertiary care hospital in Assam, North East India. Clinically, the patients were diagnosed as septicemia and urinary tract infection. The age of the patients ranged from 2 to 50 years. Identification was made by sequencing the ITS region of ribosomal RNA gene. Antifungal susceptibility test by disk diffusion method (CLSI, M44-A) showed all the isolates to be sensitive to fluconazole and voriconazole. Vitek 2 compact commercial yeast identification system misidentified this yeast as Cryptococcus laurentii and low discrimination Cryptococcus laurentii/Trichosporon mucoides. This species was originally named as Trichosporon debeurmannianum. In 2015, this yeast has been included into new genera Cutaneotrichosporon based on an integrated phylogenetic classification of the Tremellomycetes. To the best of our knowledge, this is the first report of identification of this species from blood and urine samples of clinically suspected cases. We are reporting these isolates because of their rarity in clinical samples. The pathogenic potential and epidemiological relevance of this yeast remains to be seen.


Assuntos
Sangue/microbiologia , Trichosporon/classificação , Trichosporon/isolamento & purificação , Tricosporonose/diagnóstico , Tricosporonose/microbiologia , Urina/microbiologia , Adolescente , Adulto , Antifúngicos/farmacologia , Pré-Escolar , Análise por Conglomerados , DNA Fúngico/química , DNA Fúngico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Testes de Sensibilidade a Antimicrobianos por Disco-Difusão , Feminino , Fluconazol/farmacologia , Humanos , Índia , Recém-Nascido , Masculino , Pessoa de Meia-Idade , Filogenia , Análise de Sequência de DNA , Centros de Atenção Terciária , Trichosporon/efeitos dos fármacos , Trichosporon/genética , Voriconazol/farmacologia
16.
Mem. Inst. Oswaldo Cruz ; 112(10): 719-722, Oct. 2017. graf
Artigo em Inglês | LILACS | ID: biblio-1040562

RESUMO

We report the first two cases of Trichosporon mycotoxinivorans infections in Latin America. We also conducted a literature review and a microbiological investigation, including that of clinical and environmental isolates. A 30-year-old man with chronic renal failure had disseminated infection after dialysis and a 15-year-old boy with cystic fibrosis (CF) had pulmonary exacerbations with positive respiratory samples. A review of the relevant literature revealed that deep-seated infections were related to immunosuppression or invasive devices, while most of the CF patients showed a decline in lung function after positive cultures. Phylogenetic analyses revealed three distinct circulating genotypes. MALDI-TOF mass spectrometry analysis showed similar spectral profiles and correctly identified all strains/isolates. Biofilm production was documented in a bloodstream isolate and biofilm-producing cells showed high minimum inhibitory concentrations against antifungals.


Assuntos
Humanos , Masculino , Adolescente , Adulto , Trichosporon/genética , Tricosporonose/diagnóstico , Trichosporon/classificação , Trichosporon/efeitos dos fármacos , Brasil/epidemiologia , Testes de Sensibilidade Microbiana , Biofilmes/crescimento & desenvolvimento , Tricosporonose/microbiologia , Tricosporonose/epidemiologia , Genótipo , América Latina , Antifúngicos/farmacologia
17.
Med Mycol J ; 58(3): J77-J81, 2017.
Artigo em Japonês | MEDLINE | ID: mdl-28855483

RESUMO

Fungal taxonomy has been reconstructed on the basis of genome information, and new nomenclatural rules have been enacted from 2013. It has been proposed that Cryptococcus neoformans and Cryptococcus gattii be reclassified into two species (C. neoformans and Cryptococcus deneoformans) and five species (C. gattii, Cryptococcus bacillisporus, Cryptococcus deuterogattii, Cryptococcus tetragattii, and Cryptococcus decagattii), respectively. The genus Trichosporon has been reclassified into five genera. Trichosporon asahii, which is the causative agent of trichosporonosis, has been retained in the genus Trichosporon, while Trichosporon cutaneum has been transferred into a new genus, Cutaneotrichosporon.


Assuntos
Cryptococcus gattii/classificação , Cryptococcus neoformans/classificação , Trichosporon/classificação , Cryptococcus gattii/genética , Cryptococcus gattii/isolamento & purificação , Cryptococcus neoformans/genética , Cryptococcus neoformans/isolamento & purificação , Humanos , Trichosporon/genética , Trichosporon/isolamento & purificação
18.
Mem Inst Oswaldo Cruz ; 112(10): 719-722, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-28954000

RESUMO

We report the first two cases of Trichosporon mycotoxinivorans infections in Latin America. We also conducted a literature review and a microbiological investigation, including that of clinical and environmental isolates. A 30-year-old man with chronic renal failure had disseminated infection after dialysis and a 15-year-old boy with cystic fibrosis (CF) had pulmonary exacerbations with positive respiratory samples. A review of the relevant literature revealed that deep-seated infections were related to immunosuppression or invasive devices, while most of the CF patients showed a decline in lung function after positive cultures. Phylogenetic analyses revealed three distinct circulating genotypes. MALDI-TOF mass spectrometry analysis showed similar spectral profiles and correctly identified all strains/isolates. Biofilm production was documented in a bloodstream isolate and biofilm-producing cells showed high minimum inhibitory concentrations against antifungals.


Assuntos
Trichosporon/genética , Tricosporonose/diagnóstico , Adolescente , Adulto , Antifúngicos/farmacologia , Biofilmes/crescimento & desenvolvimento , Brasil/epidemiologia , Genótipo , Humanos , América Latina , Masculino , Testes de Sensibilidade Microbiana , Trichosporon/classificação , Trichosporon/efeitos dos fármacos , Tricosporonose/epidemiologia , Tricosporonose/microbiologia
19.
PLoS One ; 12(8): e0182533, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28771577

RESUMO

Feed security, feed quality and issues surrounding the safety of raw materials are always of interest to all livestock farmers, feed manufacturers and competent authorities. These concerns are even more important when alternative feed ingredients, new product developments and innovative feeding trends, like insect-meals, are considered. The black soldier fly (Hermetia illucens) is considered a good candidate to be used as feed ingredient for aquaculture and other farm animals, mainly as an alternative protein source. Data on transfer of contaminants from different substrates to the insects, as well as the possible occurrence of toxin-producing fungi in the gut of non-processed insects are very limited. Accordingly, we investigated the impact of the substrate/diet on the intestinal mycobiota of H. illucens larvae using culture-dependent approaches (microbiological analyses, molecular identification through the typing of isolates and the sequencing of the 26S rRNA D1/D2 domain) and amplicon-based next-generation sequencing (454 pyrosequencing). We fed five groups of H. illucens larvae at the third growing stage on two substrates: chicken feed and/or vegetable waste, provided at different timings. The obtained results indicated that Pichia was the most abundant genus associated with the larvae fed on vegetable waste, whereas Trichosporon, Rhodotorula and Geotrichum were the most abundant genera in the larvae fed on chicken feed only. Differences in the fungal communities were highlighted, suggesting that the type of substrate selects diverse yeast and mold genera, in particular vegetable waste is associated with a greater diversity of fungal species compared to chicken feed only. A further confirmation of the significant influence of diet on the mycobiota is the fact that no operational taxonomic unit common to all groups of larvae was detected. Finally, the killer phenotype of isolated yeasts was tested, showing the inhibitory activity of just one species against sensitive strains, out of the 11 tested species.


Assuntos
Ração Animal/microbiologia , Fungos/classificação , Análise de Sequência de DNA/métodos , Simuliidae/fisiologia , Animais , DNA Fúngico/análise , DNA Ribossômico/análise , Microbiologia de Alimentos , Fungos/genética , Fungos/isolamento & purificação , Microbioma Gastrointestinal , Larva/microbiologia , Pichia/classificação , Pichia/isolamento & purificação , RNA Ribossômico/análise , Rhodotorula/classificação , Rhodotorula/isolamento & purificação , Simuliidae/microbiologia , Trichosporon/classificação , Trichosporon/isolamento & purificação
20.
Mycopathologia ; 182(9-10): 937-946, 2017 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-28547342

RESUMO

"Paracoccidioidomycosis ceti" is a rare zoonotic fungal infection affecting dolphins and is endemic worldwide. The causative agents are Paracoccidioides species; however, it is impossible to isolate the fungal species. We isolated Trichosporon asteroides from multifocal, irregularly raised skin lesions on a female bottlenose dolphin (Tursiops truncatus) captured off coast of Japan, which was suspected to have "paracoccidioidomycosis ceti." An abundance of round, yeast-like cells was detected in a potassium hydroxide direct-mount specimen of the skin samples; however, nested PCR targeting the partial sequence of 43-kDa glycoprotein-coding gene correspondent to Paracoccidioides sp. was negative. Biopsied tissue samples were cultured on brain heart infusion agar plates supplemented with chloramphenicol, 1% yeast extract, and 4% sodium chloride (4% NaCl-BHI), on Mycosel agar with 4% sodium chloride (4% NaCl-Mycosel), and on potato dextrose agar supplemented with chloramphenicol (CPDA) at 35 °C for 4 weeks. Cream-colored and wrinkled colonies consisting of hyphae and arthroconidia grew on 4% NaCl-BHI and CPDA, while film-like colonies composed of arthroconidia and round yeast-like cells developed on 4% NaCl-Mycosel. Although these primary cultures resembled fresh isolates of P. brasiliensis, they were identified as Trichosporon asteroides based on routine mycological studies and the internal transcribed spacer regions of ribosomal RNA sequences. The results suggested that trichosporonosis caused by T. asteroides might remain latent among cases of "paracoccidioidomycosis ceti" diagnosed without cultures and molecular biological analysis.


Assuntos
Golfinho Nariz-de-Garrafa , Dermatomicoses/veterinária , Trichosporon/classificação , Trichosporon/isolamento & purificação , Tricosporonose/veterinária , Animais , Biópsia , Análise por Conglomerados , DNA Fúngico/química , DNA Fúngico/genética , DNA Espaçador Ribossômico/química , DNA Espaçador Ribossômico/genética , Dermatomicoses/diagnóstico , Dermatomicoses/patologia , Feminino , Japão , Técnicas de Tipagem Micológica , Filogenia , Análise de Sequência de DNA , Trichosporon/genética , Tricosporonose/diagnóstico , Tricosporonose/patologia
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