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1.
Cell Metab ; 36(7): 1433-1435, 2024 Jul 02.
Artigo em Inglês | MEDLINE | ID: mdl-38959859

RESUMO

Small peptides have previously been reported to be encoded in mitochondrial rRNA and translated by cytosolic ribosomes. In this issue of Cell Metabolism, Hu et al. use mass spectrometry to identify a cytosolically translated protein, encoded instead in mitochondrial mRNA, that is surprisingly targeted back into the mitochondrial matrix.


Assuntos
Mitocôndrias , RNA Mensageiro , RNA Mensageiro/metabolismo , RNA Mensageiro/genética , Mitocôndrias/metabolismo , Mitocôndrias/genética , RNA Mitocondrial/metabolismo , RNA Mitocondrial/genética , Biossíntese de Proteínas , Proteínas Mitocondriais/metabolismo , Proteínas Mitocondriais/genética , Humanos , Citosol/metabolismo , Espectrometria de Massas
2.
Nat Commun ; 15(1): 5808, 2024 Jul 10.
Artigo em Inglês | MEDLINE | ID: mdl-38987546

RESUMO

Recently, targeted degradation has emerged as a powerful therapeutic modality. Relying on "event-driven" pharmacology, proteolysis targeting chimeras (PROTACs) can degrade targets and are superior to conventional inhibitors against undruggable proteins. Unfortunately, PROTAC discovery is limited by warhead scarcity and laborious optimization campaigns. To address these shortcomings, analogous protein-based heterobifunctional degraders, known as bioPROTACs, have been developed. Compared to small-molecule PROTACs, bioPROTACs have higher success rates and are subject to fewer design constraints. However, the membrane impermeability of proteins severely restricts bioPROTAC deployment as a generalized therapeutic modality. Here, we present an engineered bioPROTAC template able to complex with cationic and ionizable lipids via electrostatic interactions for cytosolic delivery. When delivered by biocompatible lipid nanoparticles, these modified bioPROTACs can rapidly degrade intracellular proteins, exhibiting near-complete elimination (up to 95% clearance) of targets within hours of treatment. Our bioPROTAC format can degrade proteins localized to various subcellular compartments including the mitochondria, nucleus, cytosol, and membrane. Moreover, substrate specificity can be easily reprogrammed, allowing modular design and targeting of clinically-relevant proteins such as Ras, Jnk, and Erk. In summary, this work introduces an inexpensive, flexible, and scalable platform for efficient intracellular degradation of proteins that may elude chemical inhibition.


Assuntos
Lipídeos , Proteólise , Humanos , Proteólise/efeitos dos fármacos , Lipídeos/química , Nanopartículas/química , Animais , Citosol/metabolismo , Sistemas de Liberação de Medicamentos , Proteínas Recombinantes/metabolismo , Camundongos , Lipossomos
3.
J Pharm Biomed Anal ; 248: 116335, 2024 Sep 15.
Artigo em Inglês | MEDLINE | ID: mdl-38972226

RESUMO

Synthetic cathinones are the second largest group of new psychoactive substances (NPS) monitored by the European Monitoring Centre for Drugs and Drug Addiction. Although 3-methylmethcathinone (3-MMC, C11H15NO) is legally banned in many countries, it is readily available for purchase online and on the street. Due to the scarcity of information regarding the pharmacokinetic and toxicological profile of 3-MMC, understanding its biotransformation pathways is crucial in determining its potential toxicity in humans and in the development of analytical methods for screening of human matrices. To gain more insight, Phase I and Phase II in vitro biotransformation of 3-MMC was investigated using human liver microsomes and human liver cytosol. Suspect and non-target screening approaches were employed to identify metabolites. To confirm in vitro results in an in vivo setting, human matrices (i.e., plasma, urine, saliva and hair) positive for 3-MMC (n=31) were screened. In total three biotransformation products were identified in vitro: C11H15NO2 (a hydroxylated derivate), C11H17NO (a keto-reduced derivate) and C10H13NO (an N-desmethyl derivate). All three were confirmed as human metabolites in respectively 16 %, 52 % and 42 % of the analysed human samples. In total, 61 % of the analysed samples were positive for at least one of the three metabolites. Interestingly, three urine samples were positive for all three metabolites. The presence of 3-MMC in saliva and hair indicates its potential applicability in specific settings, e.g., roadside testing or chronic consumption analysis. To our knowledge, C11H17NO was not detected before in vivo. Although some of these metabolites have been previously suggested in vitro or in a single post mortem case report, a wide in vivo confirmation including the screening of four different human matrices was performed for the first time. These metabolites could serve as potential human biomarkers to monitor human 3-MMC consumption effectively.


Assuntos
Biotransformação , Citosol , Cabelo , Metanfetamina , Microssomos Hepáticos , Humanos , Microssomos Hepáticos/metabolismo , Citosol/metabolismo , Metanfetamina/análogos & derivados , Metanfetamina/metabolismo , Metanfetamina/farmacocinética , Cabelo/química , Cabelo/metabolismo , Saliva/metabolismo , Saliva/química , Psicotrópicos/metabolismo , Psicotrópicos/farmacocinética , Masculino , Adulto , Espectrometria de Massas em Tandem/métodos
4.
Methods Mol Biol ; 2814: 133-147, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38954203

RESUMO

Activation processes at the plasma membrane have been studied with life-cell imaging using GFP fused to a protein that binds to a component of the activation process. In this way, PIP3 formation has been monitored with CRAC-GFP, Ras-GTP with RBD-Raf-GFP, and Rap-GTP with Ral-GDS-GFP. The fluorescent sensors translocate from the cytoplasm to the plasma membrane upon activation of the process. Although this translocation assay can provide very impressive images and movies, the method is not very sensitive, and amount of GFP-sensor at the plasma membrane is not linear with the amount of activator. The fluorescence in pixels at the cell boundary is partly coming from the GFP-sensor that is bound to the activated membrane and partly from unbound GFP-sensor in the cytosolic volume of that boundary pixel. The variable and unknown amount of cytosol in boundary pixels causes the low sensitivity and nonlinearity of the GFP-translocation assay. Here we describe a method in which the GFP-sensor is co-expressed with cytosolic-RFP. For each boundary pixels, the RFP fluorescence is used to determine the amount of cytosol of that pixel and is subtracted from the GFP fluorescence of that pixel yielding the amount of GFP-sensor that is specifically associated with the plasma membrane in that pixel. This GRminusRD method using GFP-sensor/RFP is at least tenfold more sensitive, more reproducible, and linear with activator compared to GFP-sensor alone.


Assuntos
Membrana Celular , Proteínas de Fluorescência Verde , Membrana Celular/metabolismo , Proteínas de Fluorescência Verde/metabolismo , Proteínas de Fluorescência Verde/genética , Humanos , Proteínas Luminescentes/metabolismo , Proteínas Luminescentes/genética , Transporte Proteico , Microscopia de Fluorescência/métodos , Citosol/metabolismo , Animais
5.
Life Sci Alliance ; 7(9)2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-38955468

RESUMO

In addition to mitochondrial DNA, mitochondrial double-stranded RNA (mtdsRNA) is exported from mitochondria. However, specific channels for RNA transport have not been demonstrated. Here, we begin to characterize channel candidates for mtdsRNA export from the mitochondrial matrix to the cytosol. Down-regulation of SUV3 resulted in the accumulation of mtdsRNAs in the matrix, whereas down-regulation of PNPase resulted in the export of mtdsRNAs to the cytosol. Targeting experiments show that PNPase functions in both the intermembrane space and matrix. Strand-specific sequencing of the double-stranded RNA confirms the mitochondrial origin. Inhibiting or down-regulating outer membrane proteins VDAC1/2 and BAK/BAX or inner membrane proteins PHB1/2 strongly attenuated the export of mtdsRNAs to the cytosol. The cytosolic mtdsRNAs subsequently localized to large granules containing the stress protein TIA-1 and activated the type 1 interferon stress response pathway. Abundant mtdsRNAs were detected in a subset of non-small-cell lung cancer cell lines that were glycolytic, indicating relevance in cancer biology. Thus, we propose that mtdsRNA is a new damage-associated molecular pattern that is exported from mitochondria in a regulated manner.


Assuntos
Citosol , Mitocôndrias , Proibitinas , RNA de Cadeia Dupla , RNA Mitocondrial , Humanos , Citosol/metabolismo , Mitocôndrias/metabolismo , RNA de Cadeia Dupla/metabolismo , RNA Mitocondrial/metabolismo , RNA Mitocondrial/genética , Linhagem Celular Tumoral , Proteínas Repressoras/metabolismo , Proteínas Repressoras/genética , Transporte de RNA , Exorribonucleases/metabolismo , Exorribonucleases/genética , Canal de Ânion 1 Dependente de Voltagem/metabolismo , Canal de Ânion 1 Dependente de Voltagem/genética , Carcinoma Pulmonar de Células não Pequenas/metabolismo , Carcinoma Pulmonar de Células não Pequenas/genética , Carcinoma Pulmonar de Células não Pequenas/patologia , Proteínas Mitocondriais
6.
Sci Rep ; 14(1): 16872, 2024 Jul 23.
Artigo em Inglês | MEDLINE | ID: mdl-39043900

RESUMO

Sphingomyelin (SM) is a major sphingolipid in mammalian cells. SM is enriched in the extracellular leaflet of the plasma membrane (PM). Besides this localization, recent electron microscopic and biochemical studies suggest the presence of SM in the cytosolic leaflet of the PM. In the present study, we generated a non-toxic SM-binding variant (NT-EqtII) based on equinatoxin-II (EqtII) from the sea anemone Actinia equina, and examined the dynamics of SM in the cytosolic leaflet of living cell PMs. NT-EqtII with two point mutations (Leu26Ala and Pro81Ala) had essentially the same specificity and affinity to SM as wild-type EqtII. NT-EqtII expressed in the cytosol was recruited to the PM in various cell lines. Super-resolution microscopic observation revealed that NT-EqtII formed tiny domains that were significantly colocalized with cholesterol and N-terminal Lyn. Meanwhile, single molecule observation at high resolutions down to 1 ms revealed that all the examined lipid probes including NT-EqtII underwent apparent fast simple Brownian diffusion, exhibiting that SM and other lipids in the cytosolic leaflet rapidly moved in and out of domains. Thus, the novel SM-binding probe demonstrated the presence of the raft-like domain in the cytosolic leaflet of living cell PMs.


Assuntos
Membrana Celular , Venenos de Cnidários , Citosol , Esfingomielinas , Esfingomielinas/metabolismo , Membrana Celular/metabolismo , Citosol/metabolismo , Animais , Venenos de Cnidários/metabolismo , Venenos de Cnidários/genética , Humanos , Anêmonas-do-Mar/metabolismo , Anêmonas-do-Mar/genética , Colesterol/metabolismo
7.
Molecules ; 29(11)2024 May 27.
Artigo em Inglês | MEDLINE | ID: mdl-38893395

RESUMO

High concentrations of acrolein (2-propenal) are found in polluted air and cigarette smoke, and may also be generated endogenously. Acrolein is also associated with the induction and progression of many diseases. The high reactivity of acrolein towards the thiol and amino groups of amino acids may cause damage to cell proteins. Acrolein may be responsible for the induction of oxidative stress in cells. We hypothesized that acrolein may contribute to the protein damage in erythrocytes, leading to the disruption of the structure of cell membranes. The lipid membrane fluidity, membrane cytoskeleton, and osmotic fragility were measured for erythrocytes incubated with acrolein for 24 h. The levels of thiol, amino, and carbonyl groups were determined in cell membrane and cytosol proteins. The level of non-enzymatic antioxidant potential (NEAC) and TBARS was also measured. The obtained research results showed that the exposure of erythrocytes to acrolein causes changes in the cell membrane and cytosol proteins. Acrolein stiffens the cell membrane of erythrocytes and increases their osmotic sensitivity. Moreover, it has been shown that erythrocytes treated with acrolein significantly reduce the non-enzymatic antioxidant potential of the cytosol compared to the control.


Assuntos
Acroleína , Citosol , Membrana Eritrocítica , Eritrócitos , Acroleína/farmacologia , Acroleína/toxicidade , Acroleína/metabolismo , Citosol/metabolismo , Citosol/efeitos dos fármacos , Eritrócitos/efeitos dos fármacos , Eritrócitos/metabolismo , Humanos , Membrana Eritrocítica/efeitos dos fármacos , Membrana Eritrocítica/metabolismo , Estresse Oxidativo/efeitos dos fármacos , Antioxidantes/farmacologia , Antioxidantes/metabolismo , Proteínas de Membrana/metabolismo , Membrana Celular/metabolismo , Membrana Celular/efeitos dos fármacos , Fluidez de Membrana/efeitos dos fármacos , Fragilidade Osmótica/efeitos dos fármacos
8.
Proc Natl Acad Sci U S A ; 121(26): e2322927121, 2024 Jun 25.
Artigo em Inglês | MEDLINE | ID: mdl-38885386

RESUMO

RNA interference (RNAi) is more efficient in coleopteran insects than other insects. StaufenC (StauC), a coleopteran-specific double-stranded RNA (dsRNA)-binding protein, is required for efficient RNAi in coleopterans. We investigated the function of StauC in the intracellular transport of dsRNA into the cytosol, where dsRNA is digested by Dicer enzymes and recruited by Argonauts to RNA-induced silencing complexes. Confocal microscopy and cellular organelle fractionation studies have shown that dsRNA is trafficked through the endoplasmic reticulum (ER) in coleopteran Colorado potato beetle (CPB) cells. StauC is localized to the ER in CPB cells, and StauC-knockdown caused the accumulation of dsRNA in the ER and a decrease in the cytosol, suggesting that StauC plays a key role in the intracellular transport of dsRNA through the ER. Using immunoprecipitation, we showed that StauC is required for dsRNA interaction with ER proteins in the ER-associated protein degradation (ERAD) pathway, and these interactions are required for RNAi in CPB cells. These results suggest that StauC works with the ERAD pathway to transport dsRNA through the ER to the cytosol. This information could be used to develop dsRNA delivery methods aimed at improving RNAi.


Assuntos
Besouros , Citosol , Degradação Associada com o Retículo Endoplasmático , Retículo Endoplasmático , RNA de Cadeia Dupla , Proteínas de Ligação a RNA , Animais , Retículo Endoplasmático/metabolismo , RNA de Cadeia Dupla/metabolismo , Citosol/metabolismo , Besouros/metabolismo , Besouros/genética , Degradação Associada com o Retículo Endoplasmático/fisiologia , Proteínas de Ligação a RNA/metabolismo , Proteínas de Ligação a RNA/genética , Proteínas de Insetos/metabolismo , Proteínas de Insetos/genética , Interferência de RNA , Transporte Biológico
9.
STAR Protoc ; 5(2): 103130, 2024 Jun 21.
Artigo em Inglês | MEDLINE | ID: mdl-38870018

RESUMO

Zinc (Zn2+) plays roles in structure, catalysis, and signaling. The majority of cellular Zn2+ is bound by proteins, but a fraction of total Zn2+ exists in a labile form. Here, we present a protocol for measuring labile cytosolic Zn2+ using an in situ calibration of a genetically encoded Förster resonance energy transfer (FRET) sensor. We describe steps for producing buffered Zn2+ solutions for performing an imaging-based calibration and analyzing the imaging data generated to determine labile Zn2+ concentration in single cells. For complete details on the use and execution of this protocol, please refer to Rakshit and Holtzen et al.1.


Assuntos
Citosol , Transferência Ressonante de Energia de Fluorescência , Zinco , Transferência Ressonante de Energia de Fluorescência/métodos , Zinco/metabolismo , Zinco/análise , Citosol/metabolismo , Citosol/química , Calibragem , Humanos , Técnicas Biossensoriais/métodos
10.
Sci Rep ; 14(1): 14900, 2024 06 28.
Artigo em Inglês | MEDLINE | ID: mdl-38942903

RESUMO

Eukaryotic cells can synthesize formyl-methionine (fMet)-containing proteins not only in mitochondria but also in the cytosol to some extent. Our previous study revealed substantial upregulation of N-terminal (Nt)-fMet-containing proteins in the cytosol of SW480 colorectal cancer cells. However, the functional and pathophysiological implications remain unclear. Here, we demonstrated that removal of the Nt-formyl moiety of Nt-fMet-containing proteins (via expressing Escherichia coli PDF peptide deformylase) resulted in a dramatic increase in the proliferation of SW480 colorectal cancer cells. This proliferation coincided with the acquisition of cancer stem cell features, including reduced cell size, enhanced self-renewal capacity, and elevated levels of the cancer stem cell surface marker CD24 and pluripotent transcription factor SOX2. Furthermore, deformylation of Nt-fMet-containing proteins promoted the tumorigenicity of SW480 colorectal cancer cells in an in vivo xenograft mouse model. Taken together, these findings suggest that cytosolic deformylation has a tumor-enhancing effect, highlighting its therapeutic potential for cancer treatment.


Assuntos
Amidoidrolases , Proliferação de Células , Citosol , Células-Tronco Neoplásicas , Humanos , Células-Tronco Neoplásicas/metabolismo , Células-Tronco Neoplásicas/patologia , Animais , Citosol/metabolismo , Camundongos , Linhagem Celular Tumoral , Amidoidrolases/metabolismo , Neoplasias Colorretais/metabolismo , Neoplasias Colorretais/patologia , Antígeno CD24/metabolismo , Fatores de Transcrição SOXB1/metabolismo , Progressão da Doença , Metionina/metabolismo , Metionina/análogos & derivados
11.
Plant Mol Biol ; 114(4): 72, 2024 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-38874897

RESUMO

The red and far-red light photoreceptor phytochrome B (phyB) transmits light signals following cytosol-to-nuclear translocation to regulate transcriptional networks therein. This necessitates changes in protein-protein interactions of phyB in the cytosol, about which little is presently known. Via introduction of a nucleus-excluding G767R mutation into the dominant, constitutively active phyBY276H (YHB) allele, we explore the functional consequences of expressing a cytosol-localized YHBG767R variant in transgenic Arabidopsis seedlings. We show that YHBG767R elicits selective constitutive photomorphogenic phenotypes in dark-grown phyABCDE null mutants, wild type and other phy-deficient genotypes. These responses include light-independent apical hook opening, cotyledon unfolding, seed germination and agravitropic hypocotyl growth with minimal suppression of hypocotyl elongation. Such phenotypes correlate with reduced PIF3 levels, which implicates cytosolic targeting of PIF3 turnover or PIF3 translational inhibition by YHBG767R. However, as expected for a cytoplasm-tethered phyB, YHBG767R elicits reduced light-mediated signaling activity compared with similarly expressed wild-type phyB in phyABCDE mutant backgrounds. YHBG767R also interferes with wild-type phyB light signaling, presumably by formation of cytosol-retained and/or otherwise inactivated heterodimers. Our results suggest that cytosolic interactions with PIFs play an important role in phyB signaling even under physiological conditions.


Assuntos
Proteínas de Arabidopsis , Arabidopsis , Citosol , Fitocromo B , Transdução de Sinais , Fitocromo B/metabolismo , Fitocromo B/genética , Arabidopsis/genética , Arabidopsis/metabolismo , Arabidopsis/crescimento & desenvolvimento , Arabidopsis/efeitos da radiação , Citosol/metabolismo , Proteínas de Arabidopsis/genética , Proteínas de Arabidopsis/metabolismo , Fatores de Transcrição Hélice-Alça-Hélice Básicos/metabolismo , Fatores de Transcrição Hélice-Alça-Hélice Básicos/genética , Hipocótilo/crescimento & desenvolvimento , Hipocótilo/genética , Hipocótilo/metabolismo , Hipocótilo/efeitos da radiação , Plantas Geneticamente Modificadas , Luz , Mutação , Regulação da Expressão Gênica de Plantas , Plântula/genética , Plântula/crescimento & desenvolvimento , Plântula/efeitos da radiação , Plântula/metabolismo , Fenótipo
12.
Sci Rep ; 14(1): 13437, 2024 06 11.
Artigo em Inglês | MEDLINE | ID: mdl-38862601

RESUMO

The primary hurdles for small interference RNA (siRNA) in clinical use are targeted and cytosolic delivery. To overcome both challenges, we have established a novel platform based on phage display, called NNJA. In this approach, a lysosomal cathepsin substrate is engineered within the flexible loops of PIII, that is displaying a unique random sequence at its N-terminus. NNJA library selection targeting cell-expressed targets should yield specific peptides localized in the cytoplasm. That is because phage internalization and subsequent localization to lysosome, upon peptide binding to the cell expressed target, will result in cleavage of PIII, rendering phage non-infective. Such phage will be eliminated from the selected pool and only peptide-phage that escapes lysosomes will advance to the next round. Proof of concept studies with the NNJA library demonstrated cytosolic localization of selected peptide-phage and peptide-siRNA, confirmed through confocal microscopy. More importantly, conjugation of siHPRT to monomeric or multimeric NNJA peptides resulted in significant reduction in HPRT mRNA in various cell types without significant cytotoxicity. Sequence similarity and clustering analysis from NGS dataset provide insights into sequence composition facilitating cell penetration. NNJA platform offers a highly efficient peptide discovery engine for targeted delivery of oligonucleotides to cytosol.


Assuntos
Peptídeos Penetradores de Células , Biblioteca de Peptídeos , RNA Interferente Pequeno , Peptídeos Penetradores de Células/metabolismo , Peptídeos Penetradores de Células/química , Humanos , RNA Interferente Pequeno/genética , RNA Interferente Pequeno/metabolismo , Lisossomos/metabolismo , Técnicas de Visualização da Superfície Celular/métodos , Citosol/metabolismo
13.
Mar Environ Res ; 199: 106566, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38865871

RESUMO

The concentrations of Cd, Cu and Zn have been determined in the tissues and the cytosolic fraction of the common cockle, Cerastoderma edule, collected from sediments in the Tamar, Plym and Avon estuaries (South West, England). Metal concentrations in the tissues of C. edule from the Avon were lower than those from the Tamar and Plym, except for Cu in the digestive gland. Significant statistical relationships were only obtained between the total sedimentary metal concentrations and Cd in the body of C. edule and Cu in the digestive gland. The cytosolic fraction was extracted from each of the tissues and separated for protein analysis thereby allowing determination of the metal contents in high molecular weight (HMW) compounds, metallothionein-like proteins (MTLP) and very low molecular weight (VLMW) compounds. The digestive glands of C. edule from the Avon had relatively low concentrations of MTLP, whereas MTLP concentrations in the digestive gland of cockles from the Tamar and Plym were higher. The cytosolic fraction of C. edule had relatively low total Cd and Cu concentrations associated with MTLP, whereas Zn was preferentially associated with the HMW and the VLMW components. The results are relevant to metal distributions in C. edule and the role of cytosols in the management of metals by C. edule and other invertebrates.


Assuntos
Cardiidae , Citosol , Monitoramento Ambiental , Poluentes Químicos da Água , Animais , Cardiidae/metabolismo , Cardiidae/química , Citosol/metabolismo , Poluentes Químicos da Água/metabolismo , Poluentes Químicos da Água/análise , Metais/metabolismo , Metais/análise , Metalotioneína/metabolismo , Inglaterra , Metais Pesados/análise , Metais Pesados/metabolismo
14.
Neurochem Res ; 49(8): 2228-2248, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-38833090

RESUMO

Intermittent hypoxia (IH) is the predominant pathophysiological disturbance in obstructive sleep apnea (OSA), characterized by neuronal cell death and neurocognitive impairment. We focus on the accumulated mitochondrial DNA (mtDNA) in the cytosol, which acts as a damage-associated molecular pattern (DAMP) and activates the cyclic GMP-AMP synthase (cGAS)-stimulator of interferon genes (STING) pathway, a known trigger for immune responses and neuronal death in degenerative diseases. However, the specific role and mechanism of the mtDNA-cGAS-STING axis in IH-induced neural damage remain largely unexplored. Here, we investigated the involvement of PANoptosis, a novel type of programmed cell death linked to cytosolic mtDNA accumulation and the cGAS-STING pathway activation, in neuronal cell death induced by IH. Our study found that PANoptosis occurred in primary cultures of hippocampal neurons and HT22 cell lines exposed to IH. In addition, we discovered that during IH, mtDNA released into the cytoplasm via the mitochondrial permeability transition pore (mPTP) activates the cGAS-STING pathway, exacerbating PANoptosis-associated neuronal death. Pharmacologically inhibiting mPTP opening or depleting mtDNA significantly reduced cGAS-STING pathway activation and PANoptosis in HT22 cells under IH. Moreover, our findings indicated that the cGAS-STING pathway primarily promotes PANoptosis by modulating endoplasmic reticulum (ER) stress. Inhibiting or silencing the cGAS-STING pathway substantially reduced ER stress-mediated neuronal death and PANoptosis, while lentivirus-mediated STING overexpression exacerbated these effects. In summary, our study elucidates that cytosolic escape of mtDNA triggers cGAS-STING pathway-dependent neuronal PANoptosis in response to IH, mainly through regulating ER stress. The discovery of the novel mechanism provides theoretical support for the prevention and treatment of neuronal damage and cognitive impairment in patients with OSA.


Assuntos
Citosol , DNA Mitocondrial , Proteínas de Membrana , Neurônios , Nucleotidiltransferases , Transdução de Sinais , Nucleotidiltransferases/metabolismo , Proteínas de Membrana/metabolismo , DNA Mitocondrial/metabolismo , Animais , Neurônios/metabolismo , Citosol/metabolismo , Transdução de Sinais/fisiologia , Camundongos , Hipóxia/metabolismo , Camundongos Endogâmicos C57BL , Linhagem Celular , Masculino , Hipocampo/metabolismo
15.
Proc Natl Acad Sci U S A ; 121(27): e2403333121, 2024 Jul 02.
Artigo em Inglês | MEDLINE | ID: mdl-38923985

RESUMO

The transient receptor potential melastatin (TRPM) tetrameric cation channels are involved in a wide range of biological functions, from temperature sensing and taste transduction to regulation of cardiac function, inflammatory pain, and insulin secretion. The structurally conserved TRPM cytoplasmic domains make up >70 % of the total protein. To investigate the mechanism by which the TRPM cytoplasmic domains contribute to gating, we employed electrophysiology and cryo-EM to study TRPM5-a channel that primarily relies on activation via intracellular Ca2+. Here, we show that activation of mammalian TRPM5 channels is strongly altered by Ca2+-dependent desensitization. Structures of rat TRPM5 identify a series of conformational transitions triggered by Ca2+ binding, whereby formation and dissolution of cytoplasmic interprotomer interfaces appear to control activation and desensitization of the channel. This study shows the importance of the cytoplasmic assembly in TRPM5 channel function and sets the stage for future investigations of other members of the TRPM family.


Assuntos
Cálcio , Ativação do Canal Iônico , Canais de Cátion TRPM , Canais de Cátion TRPM/metabolismo , Canais de Cátion TRPM/química , Animais , Ativação do Canal Iônico/fisiologia , Ratos , Cálcio/metabolismo , Humanos , Microscopia Crioeletrônica , Células HEK293 , Citosol/metabolismo , Domínios Proteicos , Conformação Proteica
16.
J Virol ; 98(7): e0035624, 2024 Jul 23.
Artigo em Inglês | MEDLINE | ID: mdl-38837380

RESUMO

The controlled release of mitochondrial content into the cytosol has emerged as one of the key steps in mitochondrial signaling. In particular, the release of mitochondrial DNA (mtDNA) into the cytosol has been shown to activate interferon beta (IFN-ß) gene expression to execute the innate immune response. In this report, we show that human adenovirus type 5 (HAdV-C5) infection induces the release of mtDNA into the cytosol. The release of mtDNA is mediated by the viral minor capsid protein VI (pVI), which localizes to mitochondria. The presence of the mitochondrial membrane proteins Bak and Bax are needed for the mtDNA release, whereas the viral E1B-19K protein blocked pVI-mediated mtDNA release. Surprisingly, the pVI-mediated mtDNA release did not increase but inhibited the IFN-ß gene expression. Notably, the pVI expression caused mitochondrial leakage of the HSP60 protein. The latter prevented specific phosphorylation of the interferon regulatory factor 3 (IRF3) needed for IFN-ß gene expression. Overall, we assign a new mitochondria and IFN-ß signaling-modulating function to the HAdV-C5 minor capsid protein VI. IMPORTANCE: Human adenoviruses (HAdVs) are common pathogens causing various self-limiting diseases, including conjunctivitis and the common cold. HAdVs need to interfere with multiple cellular signaling pathways during the infection to gain control over the host cell. In this study, we identified human adenovirus type 5 (HAdV-C5) minor capsid protein VI as a factor modulating mitochondrial membrane integrity and mitochondrial signaling. We show that pVI-altered mitochondrial signaling impedes the cell's innate immune response, which may benefit HAdV growth. Overall, our study provides new detailed insights into the HAdV-mitochondria interactions and signaling. This knowledge is helpful when developing new anti-viral treatments against pathogenic HAdV infections and improving HAdV-based therapeutics.


Assuntos
Adenovírus Humanos , Proteínas do Capsídeo , DNA Mitocondrial , Interferon beta , Mitocôndrias , Transdução de Sinais , Humanos , Adenovírus Humanos/fisiologia , Adenovírus Humanos/genética , Adenovírus Humanos/metabolismo , Proteínas do Capsídeo/metabolismo , Proteínas do Capsídeo/genética , Mitocôndrias/metabolismo , DNA Mitocondrial/metabolismo , DNA Mitocondrial/genética , Interferon beta/metabolismo , Interferon beta/genética , Imunidade Inata , Fator Regulador 3 de Interferon/metabolismo , Fator Regulador 3 de Interferon/genética , Infecções por Adenovirus Humanos/virologia , Infecções por Adenovirus Humanos/metabolismo , Membranas Mitocondriais/metabolismo , Células HEK293 , Fosforilação , Citosol/metabolismo , Citosol/virologia
17.
Bioessays ; 46(8): e2400066, 2024 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-38837436

RESUMO

The Three Prime Repair Exonuclease 1 (TREX1) has been implicated in several pathologies characterized by chronic and inborn inflammation. Aberrant innate immunity caused by DNA sensing through the cGAS-STING pathway has been proposed to play a major role in the etiology of these interferonopathies. However, the molecular source of this DNA sensing and the possible involvement of TREX1 in genome (in)stability remains poorly understood. Recent findings reignite the debate about the cellular functions performed by TREX1 nuclease, notably in chromosome biology and stability. Here I put into perspective recent findings that suggest that TREX1 is at the crossroads of DNA damage response and inflammation in different pathological contexts.


Assuntos
Exodesoxirribonucleases , Instabilidade Genômica , Fosfoproteínas , Exodesoxirribonucleases/metabolismo , Exodesoxirribonucleases/genética , Humanos , Fosfoproteínas/metabolismo , Fosfoproteínas/genética , Animais , Dano ao DNA , Citosol/metabolismo , Imunidade Inata/genética , Inflamação/genética , Reparo do DNA/genética
18.
Int J Mol Sci ; 25(12)2024 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-38928505

RESUMO

Nannochloropsis gaditana, a microalga known for its photosynthetic efficiency, serves as a cell factory, producing valuable biomolecules such as proteins, lipids, and pigments. These components make it an ideal candidate for biofuel production and pharmaceutical applications. In this study, we genetically engineered N. gaditana to overexpress the enzyme fructose-1,6-bisphosphatase (cyFBPase) using the Hsp promoter, aiming to enhance sugar metabolism and biomass accumulation. The modified algal strain, termed NgFBP, exhibited a 1.34-fold increase in cyFBPase activity under photoautotrophic conditions. This modification led to a doubling of biomass production and an increase in eicosapentaenoic acid (EPA) content in fatty acids to 20.78-23.08%. Additionally, the genetic alteration activated the pathways related to glycine, protoporphyrin, thioglucosides, pantothenic acid, CoA, and glycerophospholipids. This shift in carbon allocation towards chloroplast development significantly enhanced photosynthesis and growth. The outcomes of this study not only improve our understanding of photosynthesis and carbon allocation in N. gaditana but also suggest new biotechnological methods to optimize biomass yield and compound production in microalgae.


Assuntos
Biomassa , Frutose-Bifosfatase , Metabolômica , Microalgas , Fotossíntese , Estramenópilas , Frutose-Bifosfatase/metabolismo , Frutose-Bifosfatase/genética , Estramenópilas/genética , Estramenópilas/metabolismo , Estramenópilas/crescimento & desenvolvimento , Estramenópilas/enzimologia , Microalgas/metabolismo , Microalgas/genética , Microalgas/crescimento & desenvolvimento , Microalgas/enzimologia , Metabolômica/métodos , Citosol/metabolismo
19.
Physiol Plant ; 176(3): e14376, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38837784

RESUMO

Variations in light intensity induce cytosol pH changes in photosynthetic tissues, providing a possible signal to adjust a variety of biochemical, physiological and developmental processes to the energy status of the cells. It was shown that these pH changes are partially due to the transport of protons in or out of the thylakoid lumen. However, the ion transporters in the chloroplast that transmit these pH changes to the cytosol are not known. KEA1 and KEA2 are K+/H+ antiporters in the chloroplast inner envelope that adjust stromal pH in light-to-dark transitions. We previously determined that stromal pH is higher in kea1kea2 mutant cells. In this study, we now show that KEA1 and KEA2 are required to attenuate cytosol pH variations upon sudden light intensity changes in leaf mesophyll cells, showing they are important components of the light-modulated pH signalling module. The kea1kea2 mutant mesophyll cells also have a considerably less negative membrane potential. Membrane potential is dependent on the activity of the plasma membrane proton ATPase and is regulated by secondary ion transporters, mainly potassium channels in the plasma membrane. We did not find significant differences in the activity of the plasma membrane proton pump but found a strongly increased membrane permeability to protons, especially potassium, of the double mutant plasma membranes. Our results indicate that chloroplast envelope K+/H+ antiporters not only affect chloroplast pH but also have a strong impact on cellular ion homeostasis and energization of the plasma membrane.


Assuntos
Arabidopsis , Cloroplastos , Citosol , Antiportadores de Potássio-Hidrogênio , Concentração de Íons de Hidrogênio , Citosol/metabolismo , Cloroplastos/metabolismo , Antiportadores de Potássio-Hidrogênio/metabolismo , Antiportadores de Potássio-Hidrogênio/genética , Arabidopsis/metabolismo , Arabidopsis/genética , Arabidopsis/efeitos da radiação , Proteínas de Arabidopsis/metabolismo , Proteínas de Arabidopsis/genética , Luz , Potenciais da Membrana , Potássio/metabolismo , Células do Mesofilo/metabolismo , Mutação/genética , Folhas de Planta/metabolismo , Folhas de Planta/genética , Folhas de Planta/efeitos da radiação
20.
Cell Mol Neurobiol ; 44(1): 51, 2024 Jun 22.
Artigo em Inglês | MEDLINE | ID: mdl-38907776

RESUMO

The circadian system is a conserved time-keeping machinery that regulates a wide range of processes such as sleep/wake, feeding/fasting, and activity/rest cycles to coordinate behavior and physiology. Circadian disruption can be a contributing factor in the development of metabolic diseases, inflammatory disorders, and higher risk of cancer. Glioblastoma (GBM) is a highly aggressive grade 4 brain tumor that is resistant to conventional therapies and has a poor prognosis after diagnosis, with a median survival of only 12-15 months. GBM cells kept in culture were shown to contain a functional circadian oscillator. In seeking more efficient therapies with lower side effects, we evaluated the pharmacological modulation of the circadian clock by targeting the cytosolic kinases glycogen synthase kinase-3 (GSK-3) and casein kinase 1 ε/δ (CK1ε/δ) with specific inhibitors (CHIR99021 and PF670462, respectively), the cryptochrome protein stabilizer (KL001), or circadian disruption after Per2 knockdown expression in GBM-derived cells. CHIR99021-treated cells had a significant effect on cell viability, clock protein expression, migration, and cell cycle distribution. Moreover, cultures exhibited higher levels of reactive oxygen species and alterations in lipid droplet content after GSK-3 inhibition compared to control cells. The combined treatment of CHIR99021 with temozolomide was found to improve the effect on cell viability compared to temozolomide therapy alone. Per2 disruption affected both GBM migration and cell cycle progression. Overall, our results suggest that pharmacological modulation or molecular clock disruption severely affects GBM cell biology.


Assuntos
Neoplasias Encefálicas , Glioblastoma , Glioblastoma/patologia , Glioblastoma/metabolismo , Glioblastoma/tratamento farmacológico , Humanos , Linhagem Celular Tumoral , Neoplasias Encefálicas/patologia , Neoplasias Encefálicas/metabolismo , Neoplasias Encefálicas/tratamento farmacológico , Piridinas/farmacologia , Sobrevivência Celular/efeitos dos fármacos , Citosol/metabolismo , Citosol/efeitos dos fármacos , Quinase 3 da Glicogênio Sintase/metabolismo , Pirimidinas/farmacologia , Movimento Celular/efeitos dos fármacos , Relógios Circadianos/efeitos dos fármacos , Relógios Circadianos/fisiologia , Proteínas CLOCK/metabolismo , Proteínas CLOCK/genética , Proteínas Circadianas Period/metabolismo , Proteínas Circadianas Period/genética , Espécies Reativas de Oxigênio/metabolismo
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