Whole genome single-nucleotide variation profile-based phylogenetic tree building methods for analysis of viral, bacterial and human genomes.

Faison, William J; Rostovtsev, Alexandre; Castro-Nallar, Eduardo; Crandall, Keith A; Chumakov, Konstantin; Simonyan, Vahan; Mazumder, Raja

Faison, William J; Rostovtsev, Alexandre; Castro-Nallar, Eduardo; Crandall, Keith A; Chumakov, Konstantin; Simonyan, Vahan; Mazumder, Raja.

Afiliação

Faison WJ; The Department of Biochemistry & Molecular Medicine, George Washington University Medical Center, Washington, DC 20037, USA. Electronic address: Jamie_Faison@gwmail.gwu.edu.
Rostovtsev A; Center for Biologics Evaluation and Research, US Food and Drug Administration, 1451 Rockville Pike, Rockville, MD 20852, USA. Electronic address: Alexandre.Rostovtsev@fda.hhs.gov.
Castro-Nallar E; Computational Biology Institute, George Washington University, Ashburn, VA 20147, USA. Electronic address: Ecastron@gwmail.gwu.edu.
Crandall KA; Computational Biology Institute, George Washington University, Ashburn, VA 20147, USA. Electronic address: Kcrandall@gwu.edu.
Chumakov K; Center for Biologics Evaluation and Research, US Food and Drug Administration, 1451 Rockville Pike, Rockville, MD 20852, USA. Electronic address: Konstantin.Chumakov@fda.hhs.gov.
Simonyan V; Center for Biologics Evaluation and Research, US Food and Drug Administration, 1451 Rockville Pike, Rockville, MD 20852, USA. Electronic address: Vahan.Simonyan@fda.hhs.gov.
Mazumder R; The Department of Biochemistry & Molecular Medicine, George Washington University Medical Center, Washington, DC 20037, USA; McCormick Genomic and Proteomic Center, George Washington University, Washington, DC 20037, USA. Electronic address: Mazumder@gwu.edu.

Genomics ; 104(1): 1-7, 2014 Jul.

Article em En | MEDLINE | ID: mdl-24930720

Assuntos

Burkholderia pseudomallei/genética; Genoma Humano; Genômica/métodos; Filogenia; Poliovirus/genética; Polimorfismo de Nucleotídeo Único; Alinhamento de Sequência/métodos; Algoritmos; Humanos; Software

Palavras-chave

Cancer genomics; Next-generation sequencing; Phylogenetic; SNP; SNV; Vaccine quality control

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Filogenia / Genoma Humano / Alinhamento de Sequência / Burkholderia pseudomallei / Polimorfismo de Nucleotídeo Único / Genômica / Poliovirus Tipo de estudo: Qualitative_research Limite: Humans Idioma: En Revista: Genomics Assunto da revista: GENETICA Ano de publicação: 2014 Tipo de documento: Article País de publicação: Estados Unidos

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