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Non-structural carbohydrates in woody plants compared among laboratories.
Quentin, Audrey G; Pinkard, Elizabeth A; Ryan, Michael G; Tissue, David T; Baggett, L Scott; Adams, Henry D; Maillard, Pascale; Marchand, Jacqueline; Landhäusser, Simon M; Lacointe, André; Gibon, Yves; Anderegg, William R L; Asao, Shinichi; Atkin, Owen K; Bonhomme, Marc; Claye, Caroline; Chow, Pak S; Clément-Vidal, Anne; Davies, Noel W; Dickman, L Turin; Dumbur, Rita; Ellsworth, David S; Falk, Kristen; Galiano, Lucía; Grünzweig, José M; Hartmann, Henrik; Hoch, Günter; Hood, Sharon; Jones, Joanna E; Koike, Takayoshi; Kuhlmann, Iris; Lloret, Francisco; Maestro, Melchor; Mansfield, Shawn D; Martínez-Vilalta, Jordi; Maucourt, Mickael; McDowell, Nathan G; Moing, Annick; Muller, Bertrand; Nebauer, Sergio G; Niinemets, Ülo; Palacio, Sara; Piper, Frida; Raveh, Eran; Richter, Andreas; Rolland, Gaëlle; Rosas, Teresa; Saint Joanis, Brigitte; Sala, Anna; Smith, Renee A.
Afiliação
  • Quentin AG; CSIRO Land and Water, Private Bag 12, Hobart, Tasmania 7001, Australia Hawkesbury Institute for the Environment, University of Western Sydney, Richmond, NSW 2753, Australia audrey.quentin@csiro.au.
  • Pinkard EA; CSIRO Land and Water, Private Bag 12, Hobart, Tasmania 7001, Australia.
  • Ryan MG; Natural Resources Ecology Laboratory, Colorado State University, Fort Collins, CO 80523-1499, USA Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO 80523-1401, USA USDA Forest Service, Rocky Mountain Research Station, Fort Collins, CO 80521, USA.
  • Tissue DT; Hawkesbury Institute for the Environment, University of Western Sydney, Richmond, NSW 2753, Australia.
  • Baggett LS; USDA Forest Service, Rocky Mountain Research Station, Fort Collins, CO 80521, USA.
  • Adams HD; Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA.
  • Maillard P; INRA, UMR 1137, Ecologie et Ecophysiologie Forestières, Centre de Nancy, F-54280 Champenoux, France.
  • Marchand J; INRA, UMR 1137, Ecologie et Ecophysiologie Forestières, Plateforme Technique d'Ecologie Fonctionnelle (OC 081) Centre de Nancy, F-54280 Champenoux, France.
  • Landhäusser SM; Department of Renewable Resources, University of Alberta, Edmonton, AB, T6G 2E3, Canada.
  • Lacointe A; INRA, UMR 0547 PIAF, F:63100 Clermont-Ferrand, France Clermont Université, Université Blaise Pascal, UMR 0547 PIAF, F:6310 Clermont-Ferrand, France.
  • Gibon Y; UMR1332, Biologie du Fruit et Pathologie, INRA, Bordeaux University, 71 avenue Edouard Bourlaux, F-33140 Villenave d'Ornon, France Plateforme Métabolome du Centre de Génomique Fonctionnelle Bordeaux, MetaboHUB, IBVM, Centre INRA, 71 avenue Edouard Bourlaux, F-33140 Villenave d'Ornon, France.
  • Anderegg WR; Princeton Environmental Institute, Princeton University, Princeton NJ 08540, USA.
  • Asao S; Natural Resources Ecology Laboratory, Colorado State University, Fort Collins, CO 80523-1499, USA Graduate Degree Program in Ecology, Colorado State University, Fort Collins, CO 80523-1401, USA.
  • Atkin OK; Division of Plant Sciences, Research School of Biology, Building 46, The Australian National University, Canberra, ACT, 2601, Australia ARC Centre of Excellence in Plant Energy Biology, The Australian National University, Canberra, ACT, 2601, Australia.
  • Bonhomme M; INRA, UMR 0547 PIAF, F:63100 Clermont-Ferrand, France Clermont Université, Université Blaise Pascal, UMR 0547 PIAF, F:6310 Clermont-Ferrand, France.
  • Claye C; Tasmanian Institute of Agriculture, School of Land and Food, Private Bag 98, University of Tasmania, Hobart, Tasmania 7001, Australia.
  • Chow PS; Department of Renewable Resources, University of Alberta, Edmonton, AB, T6G 2E3, Canada.
  • Clément-Vidal A; CIRAD, UMR AGAP, F-34398 Montpellier, France.
  • Davies NW; Central Science Laboratory, Private Bag 74, University of Tasmania, Hobart, Tasmania 7001, Australia.
  • Dickman LT; Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA.
  • Dumbur R; Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, P.O. Box 12, Rehovot 7610001, Israel.
  • Ellsworth DS; Hawkesbury Institute for the Environment, University of Western Sydney, Richmond, NSW 2753, Australia.
  • Falk K; Department of Forest Ecosystems and Society, Oregon State University, Corvallis, OR 97331, USA.
  • Galiano L; Swiss Federal Research Institute WSL, CH-8903 Birmensdorf, Switzerland Institute of Hydrology, Freiburg University, Fahnenbergplatz, D-79098 Freiburg, Germany.
  • Grünzweig JM; Robert H. Smith Faculty of Agriculture, Food and Environment, The Hebrew University of Jerusalem, P.O. Box 12, Rehovot 7610001, Israel.
  • Hartmann H; Max Planck Institute for Biogeochemistry, Hans-Knöll Str. 10, 07745 Jena, Germany.
  • Hoch G; Department of Environmental Sciences - Botany, University of Basel, Schönbeinstrasse 6, CH-4056 Basel, Switzerland.
  • Hood S; Division of Biological Sciences, University of Montana, Missoula MT-59812, USA.
  • Jones JE; Tasmanian Institute of Agriculture, School of Land and Food, Private Bag 98, University of Tasmania, Hobart, Tasmania 7001, Australia.
  • Koike T; Silviculture and Forest Ecological Studies, Hokkaido University Sapporo, Hokkaido 060-8589, Japan.
  • Kuhlmann I; Max Planck Institute for Biogeochemistry, Hans-Knöll Str. 10, 07745 Jena, Germany.
  • Lloret F; CREAF, Cerdanyola del Vallès E-08193 Barcelona, Spain Universidad Autònoma Barcelona, Cerdanyola del Vallès E-08193 Barcelona, Spain.
  • Maestro M; Instituto Pirenaico de Ecología (IPE-CSIC), Av. Nuestra Señora de la Victoria s/n, 22700 Jaca, Huesca, Spain.
  • Mansfield SD; Department of Wood Science, University of British Columbia, V6T 1Z4 Vancouver, Canada.
  • Martínez-Vilalta J; CREAF, Cerdanyola del Vallès E-08193 Barcelona, Spain Universidad Autònoma Barcelona, Cerdanyola del Vallès E-08193 Barcelona, Spain.
  • Maucourt M; Plateforme Métabolome du Centre de Génomique Fonctionnelle Bordeaux, MetaboHUB, IBVM, Centre INRA, 71 avenue Edouard Bourlaux, F-33140 Villenave d'Ornon, France Université Bordeaux, UMR 1332, Biologie du Fruit et Pathologie, 71 avenue Edouard Bourlaux, F-33140 Villenave d'Ornon, France.
  • McDowell NG; Earth and Environmental Sciences Division, Los Alamos National Laboratory, Los Alamos, NM, 87545, USA.
  • Moing A; UMR1332, Biologie du Fruit et Pathologie, INRA, Bordeaux University, 71 avenue Edouard Bourlaux, F-33140 Villenave d'Ornon, France Plateforme Métabolome du Centre de Génomique Fonctionnelle Bordeaux, MetaboHUB, IBVM, Centre INRA, 71 avenue Edouard Bourlaux, F-33140 Villenave d'Ornon, France.
  • Muller B; INRA, UMR 759 LEPSE, Montpellier, F-34060 France.
  • Nebauer SG; Plant Production Department, Universitat Politécnica de Valéncia, Camino de vera s.n. 46022-Valencia, Spain.
  • Niinemets Ü; Department of Plant Physiology, Estonian University of Life Sciences, Kreutzwaldi 1, 51014 Tartu, Estonia.
  • Palacio S; Instituto Pirenaico de Ecología (IPE-CSIC), Av. Nuestra Señora de la Victoria s/n, 22700 Jaca, Huesca, Spain.
  • Piper F; Centro de Investigación en Ecosistemas de la Patagonia (CIEP), Simpson 471, Coyhaique, Chile.
  • Raveh E; Department of Fruit Trees Sciences, Institute of Plant Sciences, A.R.O., Gilat Research Center, D.N. Negev 85289, Israel.
  • Richter A; Department of Microbiology and Ecosystem Science, University of Vienna, Althanstrasse 14, A-1090 Vienna, Austria.
  • Rolland G; INRA, UMR 759 LEPSE, Montpellier, F-34060 France.
  • Rosas T; CREAF, Cerdanyola del Vallès E-08193 Barcelona, Spain.
  • Saint Joanis B; INRA, UMR 0547 PIAF, F:63100 Clermont-Ferrand, France Clermont Université, Université Blaise Pascal, UMR 0547 PIAF, F:6310 Clermont-Ferrand, France.
  • Sala A; Division of Biological Sciences, University of Montana, Missoula MT-59812, USA.
  • Smith RA; Hawkesbury Institute for the Environment, University of Western Sydney, Richmond, NSW 2753, Australia.
Tree Physiol ; 35(11): 1146-65, 2015 Nov.
Article em En | MEDLINE | ID: mdl-26423132
Non-structural carbohydrates (NSC) in plant tissue are frequently quantified to make inferences about plant responses to environmental conditions. Laboratories publishing estimates of NSC of woody plants use many different methods to evaluate NSC. We asked whether NSC estimates in the recent literature could be quantitatively compared among studies. We also asked whether any differences among laboratories were related to the extraction and quantification methods used to determine starch and sugar concentrations. These questions were addressed by sending sub-samples collected from five woody plant tissues, which varied in NSC content and chemical composition, to 29 laboratories. Each laboratory analyzed the samples with their laboratory-specific protocols, based on recent publications, to determine concentrations of soluble sugars, starch and their sum, total NSC. Laboratory estimates differed substantially for all samples. For example, estimates for Eucalyptus globulus leaves (EGL) varied from 23 to 116 (mean = 56) mg g(-1) for soluble sugars, 6-533 (mean = 94) mg g(-1) for starch and 53-649 (mean = 153) mg g(-1) for total NSC. Mixed model analysis of variance showed that much of the variability among laboratories was unrelated to the categories we used for extraction and quantification methods (method category R(2) = 0.05-0.12 for soluble sugars, 0.10-0.33 for starch and 0.01-0.09 for total NSC). For EGL, the difference between the highest and lowest least squares means for categories in the mixed model analysis was 33 mg g(-1) for total NSC, compared with the range of laboratory estimates of 596 mg g(-1). Laboratories were reasonably consistent in their ranks of estimates among tissues for starch (r = 0.41-0.91), but less so for total NSC (r = 0.45-0.84) and soluble sugars (r = 0.11-0.83). Our results show that NSC estimates for woody plant tissues cannot be compared among laboratories. The relative changes in NSC between treatments measured within a laboratory may be comparable within and between laboratories, especially for starch. To obtain comparable NSC estimates, we suggest that users can either adopt the reference method given in this publication, or report estimates for a portion of samples using the reference method, and report estimates for a standard reference material. Researchers interested in NSC estimates should work to identify and adopt standard methods.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Árvores / Carboidratos / Metabolismo dos Carboidratos / Laboratórios Tipo de estudo: Guideline / Prognostic_studies Idioma: En Revista: Tree Physiol Assunto da revista: BOTANICA / FISIOLOGIA Ano de publicação: 2015 Tipo de documento: Article País de afiliação: Austrália País de publicação: Canadá

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Árvores / Carboidratos / Metabolismo dos Carboidratos / Laboratórios Tipo de estudo: Guideline / Prognostic_studies Idioma: En Revista: Tree Physiol Assunto da revista: BOTANICA / FISIOLOGIA Ano de publicação: 2015 Tipo de documento: Article País de afiliação: Austrália País de publicação: Canadá