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Microsatellite loci obtained by next generation sequencing on the sablefish (Anoplopoma fimbria).
Orozco-Ruiz, Adonaji Madeleine; Galván-Tirado, Carolina; Orlova, Svetlana Yu; Orlov, Alexei M; García-De León, Francisco Javier.
Afiliação
  • Orozco-Ruiz AM; Laboratorio de Genética para la Conservación, Centro de Investigaciones Biológicas del Noroeste (CIBNOR), Instituto Politécnico Nacional 195, Col. Playa Palo de Santa Rita, 23096, La Paz, BCS, Mexico.
  • Galván-Tirado C; Laboratorio de Genética para la Conservación, Centro de Investigaciones Biológicas del Noroeste (CIBNOR), Instituto Politécnico Nacional 195, Col. Playa Palo de Santa Rita, 23096, La Paz, BCS, Mexico.
  • Orlova SY; Russian Federal Research Institute of Fisheries and Oceanography (VNIRO), Moscow, Russia.
  • Orlov AM; Russian Federal Research Institute of Fisheries and Oceanography (VNIRO), Moscow, Russia.
  • García-De León FJ; Severtsov Institute of Ecology and Evolution of the Russian Academy of Sciences (IPEE), Moscow, Russia.
Mol Biol Rep ; 45(5): 1523-1526, 2018 Oct.
Article em En | MEDLINE | ID: mdl-29974317
Eleven microsatellite loci were developed and characterized for the sablefish, Anoplopoma fimbria. The markers were identified from sequences obtained by next generation sequencing. Thirty samples from Aleutians Islands were genotyped. The amplifications were performed with three different annealing temperature and amplification products were visualized in ABI 3500 Genetic Analyzer. No evidence for scoring errors was detected by stuttering or due large allele dropout and neither of the loci presented a high null allele frequency (> 0.2). The number means of alleles per locus was of 12.21 and mean of observed and expected heterozygosity were of 0.60 and 0.75 respectively. The sablefish represents a resource of high commercial value on the coasts of Japan, Russia, Canada and west coast of the United States and these new primers could be useful to future diversity and structure population studies.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Perciformes / Repetições de Microssatélites Tipo de estudo: Prognostic_studies Limite: Animals Idioma: En Revista: Mol Biol Rep Ano de publicação: 2018 Tipo de documento: Article País de afiliação: México País de publicação: Holanda

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Perciformes / Repetições de Microssatélites Tipo de estudo: Prognostic_studies Limite: Animals Idioma: En Revista: Mol Biol Rep Ano de publicação: 2018 Tipo de documento: Article País de afiliação: México País de publicação: Holanda