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gndDb, a Database of Partial gnd Sequences To Assist with Analysis of Escherichia coli Communities Using High-Throughput Sequencing.
Cookson, Adrian L; Lacher, David W; Scheutz, Flemming; Wilkinson, David A; Biggs, Patrick J; Marshall, Jonathan C; Brightwell, Gale.
Afiliação
  • Cookson AL; AgResearch Limited, Hopkirk Research Institute, Palmerston North, New Zealand adrian.cookson@agresearch.co.nz.
  • Lacher DW; mEpiLab, Hopkirk Research Institute, School of Veterinary Science, Massey University, Palmerston North, New Zealand.
  • Scheutz F; Division of Molecular Biology, Office of Applied Research and Safety Assessment, Center for Food Safety and Applied Nutrition, U.S. Food and Drug Administration, Laurel, Maryland, USA.
  • Wilkinson DA; Department of Microbiology and Infection Control, Statens Serum Institut, Copenhagen, Denmark.
  • Biggs PJ; mEpiLab, Hopkirk Research Institute, School of Veterinary Science, Massey University, Palmerston North, New Zealand.
  • Marshall JC; New Zealand Food Science and Safety Research Centre, Massey University, Palmerston North, New Zealand.
  • Brightwell G; mEpiLab, Hopkirk Research Institute, School of Veterinary Science, Massey University, Palmerston North, New Zealand.
Microbiol Resour Announc ; 8(33)2019 Aug 15.
Article em En | MEDLINE | ID: mdl-31416858
ABSTRACT
The use of culture methods to detect Escherichia coli diversity does not provide sufficient resolution to identify strains present at low levels. Here, we target the hypervariable gnd gene and describe a database containing 534 distinct partial gnd sequences and associated O groups for use with culture-independent E. coli community analysis.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Microbiol Resour Announc Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Nova Zelândia
Texto completo
Adicionar na Minha BVS
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Microbiol Resour Announc Ano de publicação: 2019 Tipo de documento: Article País de afiliação: Nova Zelândia