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Effect of sequence depth and length in long-read assembly of the maize inbred NC358.
Ou, Shujun; Liu, Jianing; Chougule, Kapeel M; Fungtammasan, Arkarachai; Seetharam, Arun S; Stein, Joshua C; Llaca, Victor; Manchanda, Nancy; Gilbert, Amanda M; Wei, Sharon; Chin, Chen-Shan; Hufnagel, David E; Pedersen, Sarah; Snodgrass, Samantha J; Fengler, Kevin; Woodhouse, Margaret; Walenz, Brian P; Koren, Sergey; Phillippy, Adam M; Hannigan, Brett T; Dawe, R Kelly; Hirsch, Candice N; Hufford, Matthew B; Ware, Doreen.
Afiliação
  • Ou S; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, 50011, USA.
  • Liu J; Department of Genetics, University of Georgia, Athens, Georgia, 30602, USA.
  • Chougule KM; Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA.
  • Fungtammasan A; DNAnexus, Inc., Mountain View, San Francisco, California, 94040, USA.
  • Seetharam AS; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, 50011, USA.
  • Stein JC; Genome Informatics Facility, Iowa State University, Ames, Iowa, 50011, USA.
  • Llaca V; Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA.
  • Manchanda N; Genomics Technologies, Applied Science and Technology, Corteva Agriscience TM, Johnston, Iowa, 50131, USA.
  • Gilbert AM; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, 50011, USA.
  • Wei S; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, Minnesota, 55108, USA.
  • Chin CS; Cold Spring Harbor Laboratory, Cold Spring Harbor, New York, 11724, USA.
  • Hufnagel DE; DNAnexus, Inc., Mountain View, San Francisco, California, 94040, USA.
  • Pedersen S; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, 50011, USA.
  • Snodgrass SJ; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, 50011, USA.
  • Fengler K; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, 50011, USA.
  • Woodhouse M; Genomics Technologies, Applied Science and Technology, Corteva Agriscience TM, Johnston, Iowa, 50131, USA.
  • Walenz BP; USDA ARS Corn Insects and Crop Genetics Research Unit, Ames, Iowa, 50011, USA.
  • Koren S; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, 20892, USA.
  • Phillippy AM; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, 20892, USA.
  • Hannigan BT; Genome Informatics Section, Computational and Statistical Genomics Branch, National Human Genome Research Institute, National Institutes of Health, Bethesda, Maryland, 20892, USA.
  • Dawe RK; DNAnexus, Inc., Mountain View, San Francisco, California, 94040, USA.
  • Hirsch CN; Department of Genetics, University of Georgia, Athens, Georgia, 30602, USA. kdawe@uga.edu.
  • Hufford MB; Department of Agronomy and Plant Genetics, University of Minnesota, St. Paul, Minnesota, 55108, USA. cnhirsch@umn.edu.
  • Ware D; Department of Ecology, Evolution, and Organismal Biology, Iowa State University, Ames, Iowa, 50011, USA. mhufford@iastate.edu.
Nat Commun ; 11(1): 2288, 2020 05 08.
Article em En | MEDLINE | ID: mdl-32385271
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Zea mays / Sequenciamento de Nucleotídeos em Larga Escala / Endogamia Idioma: En Revista: Nat Commun Assunto da revista: BIOLOGIA / CIENCIA Ano de publicação: 2020 Tipo de documento: Article País de afiliação: Estados Unidos País de publicação: Reino Unido
Texto completo
Adicionar na Minha BVS
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XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Zea mays / Sequenciamento de Nucleotídeos em Larga Escala / Endogamia Idioma: En Revista: Nat Commun Assunto da revista: BIOLOGIA / CIENCIA Ano de publicação: 2020 Tipo de documento: Article País de afiliação: Estados Unidos País de publicação: Reino Unido