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Compact and robust deep learning architecture for fluorescence lifetime imaging and FPGA implementation.
Zang, Zhenya; Xiao, Dong; Wang, Quan; Jiao, Ziao; Chen, Yu; Li, David Day Uei.
Afiliação
  • Zang Z; Department of Biomedical Engineering, University of Strathclyde, Glasgow G1 1XQ, United Kingdom.
  • Xiao D; Department of Biomedical Engineering, University of Strathclyde, Glasgow G1 1XQ, United Kingdom.
  • Wang Q; Department of Biomedical Engineering, University of Strathclyde, Glasgow G1 1XQ, United Kingdom.
  • Jiao Z; Department of Biomedical Engineering, University of Strathclyde, Glasgow G1 1XQ, United Kingdom.
  • Chen Y; Department of Physics, University of Strathclyde, Glasgow G4 0NG, United Kingdom.
  • Li DDU; Department of Biomedical Engineering, University of Strathclyde, Glasgow G1 1XQ, United Kingdom.
Methods Appl Fluoresc ; 11(2)2023 Mar 20.
Article em En | MEDLINE | ID: mdl-36863024
This paper reports a bespoke adder-based deep learning network for time-domain fluorescence lifetime imaging (FLIM). By leveraging thel1-norm extraction method, we propose a 1D Fluorescence Lifetime AdderNet (FLAN) without multiplication-based convolutions to reduce the computational complexity. Further, we compressed fluorescence decays in temporal dimension using a log-scale merging technique to discard redundant temporal information derived as log-scaling FLAN (FLAN+LS). FLAN+LS achieves 0.11 and 0.23 compression ratios compared with FLAN and a conventional 1D convolutional neural network (1D CNN) while maintaining high accuracy in retrieving lifetimes. We extensively evaluated FLAN and FLAN+LS using synthetic and real data. A traditional fitting method and other non-fitting, high-accuracy algorithms were compared with our networks for synthetic data. Our networks attained a minor reconstruction error in different photon-count scenarios. For real data, we used fluorescent beads' data acquired by a confocal microscope to validate the effectiveness of real fluorophores, and our networks can differentiate beads with different lifetimes. Additionally, we implemented the network architecture on a field-programmable gate array (FPGA) with a post-quantization technique to shorten the bit-width, thereby improving computing efficiency. FLAN+LS on hardware achieves the highest computing efficiency compared to 1D CNN and FLAN. We also discussed the applicability of our network and hardware architecture for other time-resolved biomedical applications using photon-efficient, time-resolved sensors.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Methods Appl Fluoresc Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Reino Unido País de publicação: Reino Unido

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Idioma: En Revista: Methods Appl Fluoresc Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Reino Unido País de publicação: Reino Unido