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A biologist's guide to planning and performing quantitative bioimaging experiments.
Senft, Rebecca A; Diaz-Rohrer, Barbara; Colarusso, Pina; Swift, Lucy; Jamali, Nasim; Jambor, Helena; Pengo, Thomas; Brideau, Craig; Llopis, Paula Montero; Uhlmann, Virginie; Kirk, Jason; Gonzales, Kevin Andrew; Bankhead, Peter; Evans, Edward L; Eliceiri, Kevin W; Cimini, Beth A.
Afiliação
  • Senft RA; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
  • Diaz-Rohrer B; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
  • Colarusso P; Live Cell Imaging Laboratory, University of Calgary, Calgary, Alberta, Canada.
  • Swift L; Live Cell Imaging Laboratory, University of Calgary, Calgary, Alberta, Canada.
  • Jamali N; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
  • Jambor H; National Center for Tumor Diseases, University Cancer Center, NCT-UCC, Universitätsklinikum Carl Gustav Carus an der Technischen Universität Dresden, Dresden, Germany.
  • Pengo T; Informatics Institute, University of Minnesota Twin Cities, Minneapolis, Minnesota, United States of America.
  • Brideau C; Live Cell Imaging Laboratory, University of Calgary, Calgary, Alberta, Canada.
  • Llopis PM; MicRoN Core, Harvard Medical School, Boston, Massachusetts, United States of America.
  • Uhlmann V; European Bioinformatic Institute, European Molecular Biology Laboratory, Wellcome Genome Campus, Hinxton, United Kingdom.
  • Kirk J; Optical Imaging & Vital Microscopy Core, Baylor College of Medicine, Houston, Texas, United States of America.
  • Gonzales KA; Mammalian Cell Biology and Development, Rockefeller University, New York, New York, United States of America.
  • Bankhead P; Edinburgh Pathology, Centre for Genomic and Experimental Medicine, and CRUK Scotland Centre, Institute of Genetics and Cancer, University of Edinburgh, Edinburgh, United Kingdom.
  • Evans EL; Morgridge Institute and University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
  • Eliceiri KW; Morgridge Institute and University of Wisconsin-Madison, Madison, Wisconsin, United States of America.
  • Cimini BA; Imaging Platform, Broad Institute of MIT and Harvard, Cambridge, Massachusetts, United States of America.
PLoS Biol ; 21(6): e3002167, 2023 06.
Article em En | MEDLINE | ID: mdl-37368874
ABSTRACT
Technological advancements in biology and microscopy have empowered a transition from bioimaging as an observational method to a quantitative one. However, as biologists are adopting quantitative bioimaging and these experiments become more complex, researchers need additional expertise to carry out this work in a rigorous and reproducible manner. This Essay provides a navigational guide for experimental biologists to aid understanding of quantitative bioimaging from sample preparation through to image acquisition, image analysis, and data interpretation. We discuss the interconnectedness of these steps, and for each, we provide general recommendations, key questions to consider, and links to high-quality open-access resources for further learning. This synthesis of information will empower biologists to plan and execute rigorous quantitative bioimaging experiments efficiently.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Processamento de Imagem Assistida por Computador / Microscopia Idioma: En Revista: PLoS Biol Assunto da revista: BIOLOGIA Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Processamento de Imagem Assistida por Computador / Microscopia Idioma: En Revista: PLoS Biol Assunto da revista: BIOLOGIA Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos