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Considerations for reproducible omics in aging research.
Singh, Param Priya; Benayoun, Bérénice A.
Afiliação
  • Singh PP; Department of Anatomy, University of California, San Francisco, San Francisco, CA, USA. param.singh@ucsf.edu.
  • Benayoun BA; Bakar Aging Research Institute, University of California, San Francisco, San Francisco, CA, USA. param.singh@ucsf.edu.
Nat Aging ; 3(8): 921-930, 2023 08.
Article em En | MEDLINE | ID: mdl-37386258
ABSTRACT
Technical advancements over the past two decades have enabled the measurement of the panoply of molecules of cells and tissues including transcriptomes, epigenomes, metabolomes and proteomes at unprecedented resolution. Unbiased profiling of these molecular landscapes in the context of aging can reveal important details about mechanisms underlying age-related functional decline and age-related diseases. However, the high-throughput nature of these experiments creates unique analytical and design demands for robustness and reproducibility. In addition, 'omic' experiments are generally onerous, making it crucial to effectively design them to eliminate as many spurious sources of variation as possible as well as account for any biological or technical parameter that may influence such measures. In this Perspective, we provide general guidelines on best practices in the design and analysis of omic experiments in aging research from experimental design to data analysis and considerations for long-term reproducibility and validation of such studies.
Assuntos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Transcriptoma / Gerociência Tipo de estudo: Guideline Idioma: En Revista: Nat Aging Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Transcriptoma / Gerociência Tipo de estudo: Guideline Idioma: En Revista: Nat Aging Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Estados Unidos