Evaluation of rRNA depletion methods for capturing the RNA virome from environmental surfaces.

Shiwa, Yuh; Baba, Tomoya; Sierra, Maria A; Kim, JangKeun; Mason, Christopher E; Suzuki, Haruo

Shiwa, Yuh; Baba, Tomoya; Sierra, Maria A; Kim, JangKeun; Mason, Christopher E; Suzuki, Haruo.

Afiliação

Shiwa Y; Department of Molecular Microbiology, Tokyo University of Agriculture, Tokyo, Japan. y3shiwa@nodai.ac.jp.
Baba T; NODAI Genome Research Center, Tokyo University of Agriculture, Tokyo, Japan. y3shiwa@nodai.ac.jp.
Sierra MA; Advanced Genomics Center, National Institute of Genetics, Mishima, Japan.
Kim J; Joint Support-Center for Data Science Research, Research Organization of Information and Systems, Tokyo, Japan.
Mason CE; Tri-Institutional Computational Biology & Medicine Program, Weill Cornell Medicine, New York, NY, USA.
Suzuki H; Department of Physiology and Biophysics, Weill Cornell Medicine, New York, NY, USA.

BMC Res Notes ; 16(1): 142, 2023 Jul 07.

Article em En | MEDLINE | ID: mdl-37420286

Assuntos

COVID-19; RNA; Humanos; Viroma; SARS-CoV-2/genética; RNA Ribossômico/genética; Bactérias/genética

Palavras-chave

Environmental metatranscriptome analysis; Library preparation; Virome; Virus detection; rRNA depletion

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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: RNA / COVID-19 Limite: Humans Idioma: En Revista: BMC Res Notes Ano de publicação: 2023 Tipo de documento: Article País de afiliação: Japão

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