Your browser doesn't support javascript.
loading
Protocol for PPP1R15A-inhibited mouse model establishment with subcutaneous B16F1 tumor and single-cell analysis.
Wang, Rongjing; Wang, Minghui; Pei, Siyu; Zhang, Yuchao; Guo, Shiwei; Guo, Wei; Wu, Zhenchuan; Wang, Hailong; Li, Yizhe; Zhu, Yufei; Meng, Ling-Hua; Lang, Jingyu; Jin, Gang; Xiao, Yichuan; Hu, Landian; Kong, Xiangyin.
Afiliação
  • Wang R; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China.
  • Wang M; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China; University of Chinese Academy of Sciences, Shanghai, China.
  • Pei S; Department of Thoracic Surgical Oncology, Shanghai Lung Cancer Center, Shanghai Chest Hospital, Shanghai Jiao Tong University School of Medicine (SJTUSM), Shanghai 200030, China.
  • Zhang Y; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China.
  • Guo S; Changhai Hospital, Department of Hepatobiliary Pancreatic Surgery, Shanghai, China.
  • Guo W; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China.
  • Wu Z; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China; University of Chinese Academy of Sciences, Shanghai, China.
  • Wang H; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China; ShanghaiTech University, School of Life Science and Technology, Shanghai, China.
  • Li Y; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China; University of Chinese Academy of Sciences, Shanghai, China.
  • Zhu Y; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China.
  • Meng LH; Division of Anti-tumor Pharmacology, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, China.
  • Lang J; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China.
  • Jin G; Changhai Hospital, Department of Hepatobiliary Pancreatic Surgery, Shanghai, China. Electronic address: jingang@smmu.edu.cn.
  • Xiao Y; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China. Electronic address: ycxiao@sibs.ac.cn.
  • Hu L; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China; Anda Biology Medicine Development (Shenzhen) Co., Ltd, Shenzhen, China. Electronic address: ldhu2013@163.com.
  • Kong X; Shanghai Institute of Nutrition and Health, Chinese Academy of Sciences, CAS Key Laboratory of Tissue Microenvironment and Tumor, Shanghai, China; ShanghaiTech University, School of Life Science and Technology, Shanghai, China. Electronic address: xykong@sibs.ac.cn.
STAR Protoc ; 4(4): 102616, 2023 Dec 15.
Article em En | MEDLINE | ID: mdl-37756156
Here, we present a protocol for exploring the effects of PPP1R15A inhibitor, Sephin1, on antitumor immunity of B16F1 subcutaneous tumor in mice. We describe steps for constructing single-cell transcriptome and TCR libraries, sequencing, and using sequencing data for the integration of expression and TCR data. We then detail procedures for gene differentiation, regulon and cell-cell communication analysis, and validation of single-cell analysis results. For complete details on the use and execution of this protocol, please refer to Wang et al.1.
Assuntos
Palavras-chave

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Comunicação Celular / Neoplasias Limite: Animals Idioma: En Revista: STAR Protoc Ano de publicação: 2023 Tipo de documento: Article País de afiliação: China País de publicação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Comunicação Celular / Neoplasias Limite: Animals Idioma: En Revista: STAR Protoc Ano de publicação: 2023 Tipo de documento: Article País de afiliação: China País de publicação: Estados Unidos