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Development of machine learning algorithms for scaling-up antibiotic stewardship.
Tran-The, Tam; Heo, Eunjeong; Lim, Sanghee; Suh, Yewon; Heo, Kyu-Nam; Lee, Eunkyung Euni; Lee, Ho-Young; Kim, Eu Suk; Lee, Ju-Yeun; Jung, Se Young.
Afiliação
  • Tran-The T; Enolink Inc., Cambridge, USA.
  • Heo E; Department of Pharmacy, Seoul National University Bundang Hospital, Seongnam, Republic of Korea; College of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Republic of Korea.
  • Lim S; Enolink Inc., Cambridge, USA.
  • Suh Y; Department of Pharmacy, Seoul National University Bundang Hospital, Seongnam, Republic of Korea; College of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Republic of Korea.
  • Heo KN; College of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Republic of Korea.
  • Lee EE; Department of Pharmacy, Seoul National University Bundang Hospital, Seongnam, Republic of Korea; College of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Republic of Korea.
  • Lee HY; Department of Digital Healthcare, Seoul National University Bundang Hospital, Seongnam, Republic of Korea.
  • Kim ES; Department of Internal Medicine, Seoul National University Bundang Hospital, Seongnam, Republic of Korea; Department of Internal Medicine, Seoul National University College of Medicine, Seoul, Republic of Korea.
  • Lee JY; Department of Pharmacy, Seoul National University Bundang Hospital, Seongnam, Republic of Korea; College of Pharmacy and Research Institute of Pharmaceutical Sciences, Seoul National University, Seoul, Republic of Korea. Electronic address: jypharm@snu.ac.kr.
  • Jung SY; Department of Digital Healthcare, Seoul National University Bundang Hospital, Seongnam, Republic of Korea; Department of Family Medicine, Seoul National University Bundang Hospital, Seongnam, Republic of Korea. Electronic address: syjung@snubh.org.
Int J Med Inform ; 181: 105300, 2024 Jan.
Article em En | MEDLINE | ID: mdl-37995386
ABSTRACT

BACKGROUND:

Antibiotic stewardship programs (ASP) aim to reduce inappropriate use of antibiotics, but their labor-intensive nature impedes their wide adoption. The present study introduces explainable machine learning (ML) models designed to prioritize inpatients who would benefit most from stewardship interventions.

METHODS:

A cohort of inpatients who received systemic antibiotics and were monitored by a multidisciplinary ASP team at a tertiary hospital in the Republic of Korea was assembled. Data encompassing over 130,000 patient-days and comprising more than 160 features from multiple domains, including prescription records, laboratory, microbiology results, and patient conditions was collected.Outcome labels were generated using medication administration history discontinuation, switching from intravenous to oral medication (IV to PO), and early or late de-escalation. The models were trained using Extreme Gradient Boosting (XGB) and light Gradient Boosting Machine (LGBM), with SHapley Additive exPlanations (SHAP) analysis used to explain the model's predictions.

RESULTS:

The models demonstrated strong discrimination when evaluated on a hold-out test set(AUROC - IV to PO 0.81, Early de-escalation 0.78, Late de-escalation 0.72, Discontinue 0.80). The models identified 41%, 16%, 22%, and 17% more cases requiring discontinuation, IV to PO, early and late de-escalation, respectively, compared to the conventional length of therapy strategy, given that the same number of patients were reviewed by the ASP team. The SHAP results explain how each model makes their predictions, highlighting a unique set of important features that are well-aligned with the clinical intuitions of the ASP team.

CONCLUSIONS:

The models are expected to improve the efficiency of ASP activities by prioritizing cases that would benefit from different types of ASP interventions along with detailed explanations.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Gestão de Antimicrobianos Limite: Humans País/Região como assunto: Asia Idioma: En Revista: Int J Med Inform Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Gestão de Antimicrobianos Limite: Humans País/Região como assunto: Asia Idioma: En Revista: Int J Med Inform Assunto da revista: INFORMATICA MEDICA Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Estados Unidos