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Convergent mechanism underlying the acquisition of vertebrate scotopic vision.
Kojima, Keiichi; Yanagawa, Masataka; Imamoto, Yasushi; Yamano, Yumiko; Wada, Akimori; Shichida, Yoshinori; Yamashita, Takahiro.
Afiliação
  • Kojima K; Department of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan; Faculty of Medicine, Dentistry and Pharmaceutical Sciences, Okayama University, Okayama, Japan.
  • Yanagawa M; Cellular Informatics Laboratory, RIKEN Cluster for Pioneering Research, Wako, Japan; Molecular and Cellular Biochemistry, Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai, Miyagi, Japan.
  • Imamoto Y; Department of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan.
  • Yamano Y; Comprehensive Education and Research Center, Kobe Pharmaceutical University, Kobe, Japan.
  • Wada A; Laboratory of Organic Chemistry for Life Science, Kobe Pharmaceutical University, Kobe, Japan.
  • Shichida Y; Department of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan; Research Organization for Science and Technology, Ritsumeikan University, Kusatsu, Shiga, Japan.
  • Yamashita T; Department of Biophysics, Graduate School of Science, Kyoto University, Kyoto, Japan. Electronic address: yamashita.takahiro.4z@kyoto-u.ac.jp.
J Biol Chem ; 300(4): 107175, 2024 Apr.
Article em En | MEDLINE | ID: mdl-38499150
ABSTRACT
High sensitivity of scotopic vision (vision in dim light conditions) is achieved by the rods' low background noise, which is attributed to a much lower thermal activation rate (kth) of rhodopsin compared with cone pigments. Frogs and nocturnal geckos uniquely possess atypical rods containing noncanonical cone pigments that exhibit low kth, mimicking rhodopsin. Here, we investigated the convergent mechanism underlying the low kth of rhodopsins and noncanonical cone pigments. Our biochemical analysis revealed that the kth of canonical cone pigments depends on their absorption maximum (λmax). However, rhodopsin and noncanonical cone pigments showed a substantially lower kth than predicted from the λmax dependency. Given that the λmax is inversely proportional to the activation energy of the pigments in the Hinshelwood distribution-based model, our findings suggest that rhodopsin and noncanonical cone pigments have convergently acquired low frequency of spontaneous-activation attempts, including thermal fluctuations of the protein moiety, in the molecular evolutionary processes from canonical cone pigments, which contributes to highly sensitive scotopic vision.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Rodopsina / Evolução Molecular / Visão Noturna Limite: Animals Idioma: En Revista: J Biol Chem Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Japão

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Rodopsina / Evolução Molecular / Visão Noturna Limite: Animals Idioma: En Revista: J Biol Chem Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Japão