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Melting curve analysis reveals false-positive norovirus detection in a molecular syndromic panel.
Matic, Nancy; Lawson, Tanya; Young, Matthew; Jang, Willson; Bilawka, Jennifer; Gowland, Leah; Ritchie, Gordon; Leung, Victor; Payne, Michael; Stefanovic, Aleksandra; Romney, Marc G; Lowe, Christopher F.
Afiliação
  • Matic N; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada; Department of Pathology and Laboratory Medicine, University British Columbia, Vancouver, Canada. Electronic address: nmatic@mail.ubc.ca.
  • Lawson T; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada.
  • Young M; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada.
  • Jang W; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada.
  • Bilawka J; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada.
  • Gowland L; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada.
  • Ritchie G; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada; Department of Pathology and Laboratory Medicine, University British Columbia, Vancouver, Canada.
  • Leung V; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada; Department of Pathology and Laboratory Medicine, University British Columbia, Vancouver, Canada.
  • Payne M; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada; Department of Pathology and Laboratory Medicine, University British Columbia, Vancouver, Canada.
  • Stefanovic A; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada; Department of Pathology and Laboratory Medicine, University British Columbia, Vancouver, Canada.
  • Romney MG; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada; Department of Pathology and Laboratory Medicine, University British Columbia, Vancouver, Canada.
  • Lowe CF; Division of Medical Microbiology and Virology, St. Paul's Hospital, Vancouver, Canada; Department of Pathology and Laboratory Medicine, University British Columbia, Vancouver, Canada.
J Clin Virol ; 173: 105697, 2024 Aug.
Article em En | MEDLINE | ID: mdl-38820917
ABSTRACT

BACKGROUND:

Molecular syndromic panels can improve rapidity of results and ease clinical laboratory workflow, although caution has been raised for potential false-positive results. Upon implementation of a new panel for infectious diarrhea (BioFire® FilmArray® Gastrointestinal [GI] Panel, bioMérieux) in our clinical laboratory, a higher than expected number of stool samples with norovirus were detected.

OBJECTIVES:

The goal of this study was to investigate positive percent agreement and the false-positive rate of norovirus detected by the multiplex BioFire GI panel compared to a singleplex commercial assay. STUDY

DESIGN:

From October 2023 to January 2024, all prospective stool samples with a positive norovirus result by BioFire had melting curves reviewed manually using the BioFire FilmArray Torch System. Stool samples further underwent testing by a supplementary real-time RT-PCR assay (Xpert® Norovirus, Cepheid) for comparative analysis.

RESULTS:

Of the 50 stool samples with norovirus detected by BioFire, 18 (36 %) tested negative by Xpert (deemed "false-positives"). Furthermore, melting curve analysis revealed nearly all of these samples had atypical melting curve morphologies for the "Noro-1" target on BioFire (16/18, 89 %), which was statistically significant (Odds Ratio 173.2, 95 % CI [22.2, 5326.9], p < 0.0001). Stool samples with multiple pathogens detected by BioFire including norovirus were not more likely to produce false-positive norovirus results (Odds Ratio 1, 95 % CI [0.3, 3.3], p = 1).

CONCLUSIONS:

Although not described in the manufacturer's Instructions for Use, we propose routine manual review of melting curves for the BioFire GI panel prior to reporting, to mitigate potential false-positive norovirus results.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Infecções por Caliciviridae / Norovirus / Fezes / Gastroenterite Limite: Adolescent / Adult / Aged / Child / Child, preschool / Female / Humans / Infant / Male / Middle aged Idioma: En Revista: J Clin Virol Assunto da revista: VIROLOGIA Ano de publicação: 2024 Tipo de documento: Article

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Infecções por Caliciviridae / Norovirus / Fezes / Gastroenterite Limite: Adolescent / Adult / Aged / Child / Child, preschool / Female / Humans / Infant / Male / Middle aged Idioma: En Revista: J Clin Virol Assunto da revista: VIROLOGIA Ano de publicação: 2024 Tipo de documento: Article