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Enhancing efficiency in detection of COVID-19 through AI-driven colorimetric isothermal detection with multiplex primers.
Jaroenram, Wansadaj; Teerapittayanon, Surat; Suvannakad, Rapheephat; Pengpanich, Sukanya; Kampeera, Jantana; Arunrut, Narong; Dangtip, Sirintip; Sirithammajak, Sarawut; Tondee, Benyatip; Khumwan, Pakapreud; Japakasetr, Supak; Leaungwutiwong, Pornsawan; Chatnuntawech, Itthi; Kiatpathomchai, Wansika.
Afiliação
  • Jaroenram W; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Teerapittayanon S; National Nanotechnology Center (NANOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Suvannakad R; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Pengpanich S; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Kampeera J; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Arunrut N; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Dangtip S; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Sirithammajak S; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Tondee B; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Khumwan P; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Japakasetr S; Genome-Molecule Laboratory Co., Ltd., Bangkok, Thailand.
  • Leaungwutiwong P; Department of Microbiology and Immunology, Faculty of Tropical Medicine, Mahidol University, Bangkok, Thailand.
  • Chatnuntawech I; National Nanotechnology Center (NANOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand.
  • Kiatpathomchai W; National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), 111 Thailand Science Park, Phahonyothin Rd., Klong Neung, Klong Luang, Pathum Thani 12120, Thailand. Electronic address: wansika@biotec.or.th.
Diagn Microbiol Infect Dis ; 110(2): 116446, 2024 Oct.
Article em En | MEDLINE | ID: mdl-39096664
ABSTRACT
COVID-19 has afflicted millions of lives worldwide. Although there are many rapid methods to detect it based on colorimetric loop-mediated isothermal amplification, there remains room for improvement. This study aims to 1) integrate multiple primers into a singleplex assay to enhance the diagnostic sensitivity, and 2) utilize a high-throughput smartphone-operatable AI-driven color reading tool to enable a rapid result analysis. This setup can improve the sensitivity by 10-100 times and can analyze approximately 6700 samples per minute. The assay is simpler than RT-qPCR, with a turnaround time of less than 75 min. It can detect various types of SARS-CoV-2 by targeting 3 genes, increasing the likelihood that it will remain effective even if the virus undergoes mutations in any single target gene. In summary, it affords potential for adaptation to detection of new/re-emerging diseases with the visual readout for maximum assay simplicity and AI-operated mode for large-scale testing.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Sensibilidade e Especificidade / Colorimetria / Técnicas de Amplificação de Ácido Nucleico / Técnicas de Diagnóstico Molecular / SARS-CoV-2 / COVID-19 Limite: Humans Idioma: En Revista: Diagn Microbiol Infect Dis Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Tailândia País de publicação: Estados Unidos

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Sensibilidade e Especificidade / Colorimetria / Técnicas de Amplificação de Ácido Nucleico / Técnicas de Diagnóstico Molecular / SARS-CoV-2 / COVID-19 Limite: Humans Idioma: En Revista: Diagn Microbiol Infect Dis Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Tailândia País de publicação: Estados Unidos