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Web of venom: exploration of big data resources in animal toxin research.
Zancolli, Giulia; von Reumont, Björn Marcus; Anderluh, Gregor; Caliskan, Figen; Chiusano, Maria Luisa; Fröhlich, Jacob; Hapeshi, Evroula; Hempel, Benjamin-Florian; Ikonomopoulou, Maria P; Jungo, Florence; Marchot, Pascale; de Farias, Tarcisio Mendes; Modica, Maria Vittoria; Moran, Yehu; Nalbantsoy, Ayse; Procházka, Jan; Tarallo, Andrea; Tonello, Fiorella; Vitorino, Rui; Zammit, Mark Lawrence; Antunes, Agostinho.
Afiliação
  • Zancolli G; Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.
  • von Reumont BM; SIB Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland.
  • Anderluh G; Goethe University Frankfurt, Faculty of Biological Sciences, 60438 Frankfurt, Germany.
  • Caliskan F; LOEWE Centre for Translational Biodiversity Genomics, 60325 Frankfurt, Germany.
  • Chiusano ML; Department of Molecular Biology and Nanobiotechnology, National Institute of Chemistry, 1000 Ljubljana, Slovenia.
  • Fröhlich J; Department of Biology, Faculty of Science, Eskisehir Osmangazi University, 26040 Eskisehir, Turkey.
  • Hapeshi E; Department of Agricultural Sciences, University Federico II of Naples, 80055 Portici, Naples, Italy.
  • Hempel BF; Department of Research Infrastructures for Marine Biological Resources, Stazione Zoologica Anton Dohrn, Villa Comunale, 80121 Naples, Italy.
  • Ikonomopoulou MP; Veterinary Center for Resistance Research (TZR), Freie Universität Berlin, 14163 Berlin, Germany.
  • Jungo F; Department of Health Sciences, School of Life and Health Sciences, University of Nicosia, 1700 Nicosia, Cyprus.
  • Marchot P; Veterinary Center for Resistance Research (TZR), Freie Universität Berlin, 14163 Berlin, Germany.
  • de Farias TM; Madrid Institute of Advanced Studies in Food, Precision Nutrition & Aging Program, 28049 Madrid, Spain.
  • Modica MV; SIB Swiss Institute of Bioinformatics, Swiss-Prot Group, 1211 Geneva, Switzerland.
  • Moran Y; Laboratory Architecture et Fonction des Macromolécules Biologiques, Aix-Marseille University, Centre National de la Recherche Scientifique, Faculté des Sciences, Campus Luminy, 13288 Marseille, France.
  • Nalbantsoy A; Department of Ecology and Evolution, University of Lausanne, 1015 Lausanne, Switzerland.
  • Procházka J; SIB Swiss Institute of Bioinformatics, 1015 Lausanne, Switzerland.
  • Tarallo A; Department of Biology and Evolution of Marine Organisms, Stazione Zoologica Anton Dohrn, 00198 Rome, Italy.
  • Tonello F; Department of Ecology, Evolution and Behavior, Alexander Silberman Institute of Life Sciences, Faculty of Science, The Hebrew University of Jerusalem, 9190401 Jerusalem, Israel.
  • Vitorino R; Engineering Faculty, Bioengineering Department, Ege University, 35100 Bornova-Izmir, Turkey.
  • Zammit ML; Laboratory of Transgenic Models of Diseases, Institute of Molecular Genetics of the Czech Academy of Sciences, 252 50 Vestec, Czech Republic.
  • Antunes A; Institute of Research on Terrestrial Ecosystems (IRET), National Research Council (CNR), 73100 Lecce, Italy.
Gigascience ; 132024 Jan 02.
Article em En | MEDLINE | ID: mdl-39250076
ABSTRACT
Research on animal venoms and their components spans multiple disciplines, including biology, biochemistry, bioinformatics, pharmacology, medicine, and more. Manipulating and analyzing the diverse array of data required for venom research can be challenging, and relevant tools and resources are often dispersed across different online platforms, making them less accessible to nonexperts. In this article, we address the multifaceted needs of the scientific community involved in venom and toxin-related research by identifying and discussing web resources, databases, and tools commonly used in this field. We have compiled these resources into a comprehensive table available on the VenomZone website (https//venomzone.expasy.org/10897). Furthermore, we highlight the challenges currently faced by researchers in accessing and using these resources and emphasize the importance of community-driven interdisciplinary approaches. We conclude by underscoring the significance of enhancing standards, promoting interoperability, and encouraging data and method sharing within the venom research community.
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Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Peçonhas / Biologia Computacional / Internet / Big Data Limite: Animals Idioma: En Revista: Gigascience Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Suíça País de publicação: Estados Unidos
Texto completo
Adicionar na Minha BVS
Imprimir
XML
PubMed Links
Buscar no Google

Texto completo: 1 Coleções: 01-internacional Base de dados: MEDLINE Assunto principal: Peçonhas / Biologia Computacional / Internet / Big Data Limite: Animals Idioma: En Revista: Gigascience Ano de publicação: 2024 Tipo de documento: Article País de afiliação: Suíça País de publicação: Estados Unidos