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1.
Nature ; 496(7444): 238-42, 2013 Apr 11.
Article in English | MEDLINE | ID: mdl-23535595

ABSTRACT

Macrophages activated by the Gram-negative bacterial product lipopolysaccharide switch their core metabolism from oxidative phosphorylation to glycolysis. Here we show that inhibition of glycolysis with 2-deoxyglucose suppresses lipopolysaccharide-induced interleukin-1ß but not tumour-necrosis factor-α in mouse macrophages. A comprehensive metabolic map of lipopolysaccharide-activated macrophages shows upregulation of glycolytic and downregulation of mitochondrial genes, which correlates directly with the expression profiles of altered metabolites. Lipopolysaccharide strongly increases the levels of the tricarboxylic-acid cycle intermediate succinate. Glutamine-dependent anerplerosis is the principal source of succinate, although the 'GABA (γ-aminobutyric acid) shunt' pathway also has a role. Lipopolysaccharide-induced succinate stabilizes hypoxia-inducible factor-1α, an effect that is inhibited by 2-deoxyglucose, with interleukin-1ß as an important target. Lipopolysaccharide also increases succinylation of several proteins. We therefore identify succinate as a metabolite in innate immune signalling, which enhances interleukin-1ß production during inflammation.


Subject(s)
Hypoxia-Inducible Factor 1, alpha Subunit/metabolism , Interleukin-1beta/biosynthesis , Signal Transduction , Succinic Acid/metabolism , Animals , Bone Marrow Cells/cytology , Citric Acid Cycle/drug effects , Deoxyglucose/pharmacology , Down-Regulation/drug effects , Genes, Mitochondrial/drug effects , Genes, Mitochondrial/genetics , Glutamine/metabolism , Glycolysis/drug effects , Glycolysis/genetics , Humans , Immunity, Innate/drug effects , Inflammation/metabolism , Interleukin-1beta/genetics , Lipopolysaccharides/pharmacology , Macrophages/cytology , Macrophages/drug effects , Macrophages/metabolism , Mice , Up-Regulation/drug effects , gamma-Aminobutyric Acid/metabolism
2.
J Exp Med ; 166(1): 77-94, 1987 Jul 01.
Article in English | MEDLINE | ID: mdl-3496414

ABSTRACT

An LPS-stimulated, human monocyte cDNA library was screened for stimulation-specific clones. One clone (pcD-1214) contained a 1.9-kb pair insert that hybridized to a 2,000-nucleotide mRNA expressed by peripheral blood monocytes, the histiocytic lymphoma cell line U937, and umbilical cord endothelial cells. The 415-amino-acid precursor polypeptide predicted from the cDNA (46,596 molecular weight) has a putative 22-residue signal peptide and approximately 35% homology with members of the serine protease inhibitor (Serpin) superfamily. On the basis of amino acid homology and alignment of COOH-terminal residues within the Serpin-reactive center, the clone pcD-1214 was identified as coding for an Arg-Serpin. Southern blot analysis of human-mouse somatic cell hybrid DNA locates the Arg-Serpin gene on human chromosome 18. A perfect match between amino acid residues 347-376 in this Arg-Serpin and the published sequence of a 30-residue, tryptic peptide from the COOH-terminus of a monocyte plasminogen activator-inhibitor (PAI-2), strongly suggests that the Arg-Serpin encoded by pcD-1214 is PAI-2.


Subject(s)
Arginine , DNA/genetics , Glycoproteins/genetics , Monocytes/analysis , Proteins/genetics , Amino Acid Sequence , Base Sequence , Chromosome Mapping , Chromosomes, Human, Pair 18 , Gene Expression Regulation , Humans , Plasminogen Inactivators , Protein Biosynthesis , Protein Processing, Post-Translational , RNA, Messenger/genetics , Sequence Homology, Nucleic Acid , Serine Proteinase Inhibitors
3.
J Clin Invest ; 85(6): 1853-7, 1990 Jun.
Article in English | MEDLINE | ID: mdl-2161430

ABSTRACT

The immediate early (IE) genes of human cytomegalovirus (HCMV) can be expressed in monocytes/macrophages and are known to regulate other viral genes. The purpose of these studies was to determine if HCMV IE gene products also modulate expression of a monocyte/macrophage-derived gene, interleukin 1 (IL-1) beta. Steady-state cell-derived IL-1 beta mRNA was increased in lipopolysaccharide (LPS)-stimulated THP-1 cells when transfected with the HCMV IE1 + 2 genes, when compared to cells transfected with a control DNA. LPS-stimulated THP-1 cells also exhibited approximately 30-fold higher IL-1 CAT activity when cotransfected with IE1 + 2 than was observed for the same cells cotransfected with IL-1 CAT and a control plasmid containing the IE promoter alone. LPS increased IL-1 CAT activity in the absence of HCMV genes only twofold. IE1, by itself, increased IL-1 CAT activity in LPS-stimulated cells, whereas, IE2, by itself, caused no change in IL-1 CAT activity. These studies show that the IE1 gene of HCMV can regulate IL-1 beta gene expression. The observations further suggest that some of the inflammatory processes associated with HCMV infection may be due to an effect of HCMV IE genes on cell-derived genes, such as the IL-1 beta gene.


Subject(s)
Antigens, Viral/physiology , Cytomegalovirus/genetics , Genes, Viral , Immediate-Early Proteins , Interleukin-1/genetics , Viral Proteins/genetics , Gene Expression Regulation , Humans , Lipopolysaccharides/pharmacology , Plasmids , Promoter Regions, Genetic , RNA, Messenger/genetics
4.
J Clin Invest ; 90(5): 1726-35, 1992 Nov.
Article in English | MEDLINE | ID: mdl-1331173

ABSTRACT

A human ovarian small cell carcinoma line (BIN-67) expresses abundant calcitonin (CT) receptors (CTR) (143,000 per cell) that are coupled, to adenylate cyclase. The dissociation constants (Kd) for the CTRs on these BIN-67 cells is approximately 0.42 nM for salmon CT and approximately 4.6 nM for human CT. To clone a human CTR (hCTR), a BIN-67 cDNA library was screened using a cDNA probe from a porcine renal CTR (pCTR) that we recently cloned. One positive clone of 3,588 bp was identified. Transfection of this cDNA into COS cells resulted in expression of receptors with high affinity for salmon CT (Kd = approximately 0.44 nM) and for human CT (Kd = approximately 5.4 nM). The expressed hCTR was coupled to adenylate cyclase. Northern analysis with the hCTR cDNA probe indicated a single transcript of approximately 4.2 kb. The cloned cDNA encodes a putative peptide of 490 amino acids with seven potential transmembrane domains. The amino acid sequence of the hCTR is 73% identical to the pCTR, although the hCTR contains an insert of 16 amino acids between transmembrane domain I and II. The structural differences may account for observed differences in binding affinity between the porcine renal and human ovarian CTRs. The CTRs are closely related to the receptors for parathyroid hormone-parathyroid hormone-related peptide and secretin; these receptors comprise a distinct family of G protein-coupled seven transmembrane domain receptors. Interestingly, the hCTR sequence is remotely related to the cAMP receptor of Dictyostelium discoideum (21% identical), but is not significantly related to other G protein-coupled receptor sequences now in the data bases.


Subject(s)
Cloning, Molecular , Ovarian Neoplasms/chemistry , Receptors, Cell Surface/genetics , Amino Acid Sequence , Base Sequence , Cyclic AMP/biosynthesis , Female , Humans , Molecular Sequence Data , Ovarian Neoplasms/pathology , RNA, Messenger/analysis , Receptors, Calcitonin , Receptors, Cell Surface/analysis , Receptors, Cell Surface/chemistry , Receptors, Cyclic AMP/analysis , Tumor Cells, Cultured
5.
J Clin Invest ; 77(6): 1734-9, 1986 Jun.
Article in English | MEDLINE | ID: mdl-3519678

ABSTRACT

Complementary DNA coding for human monocyte interleukin 1 (IL-1), pI 7 form, was expressed in Escherichia coli. During purification, IL-1 activity on murine T cells was associated with the recombinant protein. Homogeneous human recombinant IL-1 (hrIL-1) was tested in several assays to demonstrate the immunological and inflammatory properties attributed to this molecule. hrIL-1 induced proliferative responses in a cloned murine T cell in the presence of suboptimal concentrations of mitogen, whereas no effect was observed with hrIL-1 alone. At concentrations of 0.05 ng/ml, hrIL-1 doubled the response to mitogen (5 X 10(6) half maximal units/mg). Human peripheral blood T cells depleted of adherent cells underwent a blastogenic response and released interleukin 2 in the presence of hrIL-1 and mitogen. hrIL-1 was a potent inflammatory agent by its ability to induce human dermal fibroblast prostaglandin E2 production in vitro and to produce monophasic (endogenous pyrogen) fever when injected into rabbits or endotoxin-resistant mice. These studies establish that the dominant pI 7 form of recombinant human IL-1 possesses immunological and inflammatory properties and acts on the central nervous system to produce fever.


Subject(s)
Interleukin-1/pharmacology , Recombinant Proteins/pharmacology , Amino Acids/analysis , Animals , DNA/analysis , Dinoprostone , Dose-Response Relationship, Drug , Escherichia coli/genetics , Fever/chemically induced , Fibroblasts/drug effects , Fibroblasts/metabolism , Humans , Lymphocyte Activation/drug effects , Mice , Mice, Inbred C3H , Molecular Weight , Prostaglandins E/biosynthesis , Rabbits , T-Lymphocytes/drug effects
6.
Mol Cell Biol ; 14(11): 7285-97, 1994 Nov.
Article in English | MEDLINE | ID: mdl-7935442

ABSTRACT

A site located between -2782 and -2729 of the human prointerleukin-1 beta (IL1B) gene functions as a strong lipopolysaccharide (LPS)-responsive enhancer independent of the previously identified enhancer located between -2896 and -2846 (F. Shirakawa, K. Saito, C.A. Bonagura, D.L. Galson, M. J. Fenton, A. C. Webb, and P. E. Auron, Mol. Cell. Biol. 13:1332-1344, 1993). Although these two enhancers appear to function cooperatively in the native sequence context, they function independently as LPS-responsive elements upon removal of an interposed silencer sequence. The new enhancer is not induced by dibutyryl cyclic AMP (dbcAMP) alone but is superinduced by costimulation with LPS-dbcAMP. This pattern of induction depends upon the nature of the sequence, a composite NF-IL6-cAMP response element (CRE) binding site. This pseudosymmetrical sequence is shown to contrast with a classical symmetric CRE which responds to dbcAMP but not LPS. DNA binding studies using in vivo nuclear extract, recombinant proteins, and specific antibodies show that LPS induces the formation of two different complexes at the enhancer: (i) an NF-IL6-CREB heterodimer and (ii) a heterodimer consisting of NF-IL6 and a non-CREB, CRE-binding protein. Cotransfection studies using NF-IL6 and CREB expression vectors show that NF-IL6 transactivates the enhancer in the presence of LPS, whereas CREB acts either positively or negatively, depending upon its cAMP-regulated phosphorylation state. Our data demonstrate that the newly identified enhancer is a specialized LPS-responsive sequence which can be modulated by cAMP as a result of the involvement of NF-IL6-CRE-binding protein heterodimers.


Subject(s)
Cyclic AMP Response Element-Binding Protein/metabolism , DNA-Binding Proteins/metabolism , Interleukin-1/genetics , Nuclear Proteins/metabolism , Protein Precursors/genetics , Base Sequence , Binding Sites/genetics , CCAAT-Enhancer-Binding Proteins , Cell Line , Cyclic AMP/metabolism , DNA/genetics , DNA/metabolism , Enhancer Elements, Genetic/drug effects , Gene Expression Regulation/drug effects , Humans , Lipopolysaccharides/pharmacology , Molecular Sequence Data , Point Mutation , Protein Binding , Transcriptional Activation
7.
Mol Cell Biol ; 16(5): 2183-94, 1996 May.
Article in English | MEDLINE | ID: mdl-8628285

ABSTRACT

Binding of many cytokines to their cognate receptors immediately activates Jak tyrosine kinases and their substrates, STAT (signal transducers and activators of transcription) DNA-binding proteins. The DNA binding targets of STATs are sequence elements related to the archetypal gamma interferon activation site, GAS. However, association of interleukin 1 (IL-1) with Jak-STAT signaling has remained unresolved. We now report an element termed LILRE (lipopolysaccharide [LPS] and IL-1-responsive element) in the human prointerleukin 1beta gene (IL1B) which can be immediately induced by either lipopolysaccharide (LPS) or IL-1 protein to bind a tyrosine-phosphorylated protein. This LPS- and IL-1-induced factor (LIL factor) is recognized by an antibody raised against the N terminus of Stat1, but not by those specific for either the C terminus of Stat1 or any other GAS-binding STAT. Phosphotyrosine (P-Tyr) specifically inhibits formation of the LIL factor-DNA complex, suggesting the importance of P-Tyr for the DNA-binding activity, as has been found for all STAT dimers. Analysis of DNA-binding specificity demonstrates that the LIL factor possesses a novel GAS-like binding activity that contrasts with those of other STATs in a requirement for a G residue at position 8 (TTCCTGAGA). Further investigation has revealed that IL-6, but neither IL-4 nor gamma interferon, activates the LIL factor. Thus, the existence of such a STAT-like factor (LIL-Stat) relates the LPS and IL-1 signaling pathway to other cytokine receptor signaling pathways via the activation of STATs. Moreover, the unique DNA-binding specificity and antigenicity of this factor suggest that LPS, IL-1, and IL-6 may use a common signaling pathway.


Subject(s)
DNA-Binding Proteins/metabolism , Interferon-gamma/metabolism , Interleukin-1/genetics , Interleukin-1/pharmacology , Interleukin-6/pharmacology , Lipopolysaccharides/pharmacology , Signal Transduction , Transcription Factors/metabolism , Transcriptional Activation , Amino Acid Sequence , Animals , Antibodies , Base Sequence , Binding Sites , Cell Line , Cell Nucleus/metabolism , DNA-Binding Proteins/isolation & purification , Gene Expression/drug effects , Humans , Mice , Molecular Sequence Data , Oligodeoxyribonucleotides , Phosphopeptides/chemical synthesis , Phosphopeptides/chemistry , Phosphoproteins/chemistry , Phosphoproteins/metabolism , Phosphotyrosine , Recombinant Proteins/pharmacology , Sequence Homology, Nucleic Acid , Thymoma , Thymus Neoplasms , Transcription Factors/isolation & purification , Tumor Cells, Cultured
8.
Mol Cell Biol ; 15(1): 58-68, 1995 Jan.
Article in English | MEDLINE | ID: mdl-7799967

ABSTRACT

Interleukin-1 beta (IL-1 beta) is produced primarily by stimulated monocytes, suggesting that the IL1B gene, which codes for this protein, depends upon at least one cell-type-specific factor. Our previous characterization of the IL1B promoter indicated that the region between -131 and +12 is sufficient to direct cell-type-specific expression of a reporter gene (F. Shirakawa, K. Saito, C.A. Bonagura, D.L. Galson, M.J. Fenton, A.C. Webb, and P. E. Auron, Mol. Cell. Biol. 13:1332-1344, 1993). We now show that a sequence located between positions -50 and -39 of the IL1B promoter binds the tissue-restricted Ets domain transcription factor Spi-1/PU.1 (Spi-1). Mutation of this site abrogates binding of this factor and reduces the ability of the IL1B promoter to function in macrophages. A second Spi-1 binding site located between positions -115 and -97 also is required for maximal IL1B promoter activity in the presence of the proximal Spi-1 binding site. In addition, an activation domain-deficient Spi-1 expression vector acts as a dominant-negative inhibitor of reporter gene expression in a monocyte cell line. Finally, the IL1B promoter, which is inactive in Spi-1-deficient HeLa cells, is activated in these cells by cotransfection with a Spi-1 expression vector. Thus, the cell-type-specific expression of the IL1B promoter appears to be dependent on the binding of Spi-1.


Subject(s)
DNA-Binding Proteins/metabolism , Interleukin-1/genetics , Monocytes/physiology , Promoter Regions, Genetic , Animals , Base Sequence , Binding Sites , CCAAT-Enhancer-Binding Proteins , Consensus Sequence , DNA Mutational Analysis , Gene Expression Regulation , HeLa Cells , Humans , In Vitro Techniques , Mice , Molecular Sequence Data , Nuclear Proteins/metabolism , RNA, Messenger/genetics , Retroviridae Proteins, Oncogenic , Sequence Alignment , Sequence Deletion , Sequence Homology, Nucleic Acid , Transcription, Genetic , Transcriptional Activation
9.
Mol Cell Biol ; 13(3): 1332-44, 1993 Mar.
Article in English | MEDLINE | ID: mdl-8441379

ABSTRACT

In these studies, we have identified DNA sequences and specific protein interactions necessary for transcriptional regulation of the human prointerleukin 1 beta (proIL-1 beta) gene. A cell-type-independent lipopolysaccharide (LPS)-responsive enhancer element located between -3757 and -2729 bp upstream from the transcription start site (cap site) consisted of at least six discrete subregions which were essential to the maximal induction by LPS in transfected monocytes. The enhancer also appeared to mediate phorbol myristate acetate induction in monocytes and IL-1 responsiveness in fibroblasts. Deletion and base substitution mutations along with DNA binding studies demonstrated that the enhancer contained a minimum of three functional protein binding sequences, two of which appeared to be important for gene induction. One of the essential proteins which bound to the enhancer was similar or identical to members of the C/EBP family of transcription factors required for both IL-1- and LPS-specific induction of the IL-6 gene (i.e., the NF-IL6 proteins). When ligated to the proIL-1 beta cap site-proximal region (located between -131 to +12), both the proIL-1 beta and the simian virus 40 enhancer elements functioned more efficiently in monocytes than in HeLa cells, which are not normally competent for IL-1 beta expression. When ligated to the murine c-fos promoter, however, the proIL-1 beta enhancer was inducible in phorbol myristate acetate-stimulated HeLa cells, suggesting the existence of a proIL-1 beta promoter-proximal requirement for tissue specificity.


Subject(s)
Enhancer Elements, Genetic/genetics , Interleukin-1/genetics , Protein Precursors/genetics , Transcription, Genetic , Animals , Base Sequence , CCAAT-Enhancer-Binding Proteins , Chloramphenicol O-Acetyltransferase/biosynthesis , Chloramphenicol O-Acetyltransferase/genetics , DNA Mutational Analysis , DNA-Binding Proteins/pharmacology , Fibroblasts/cytology , Gene Expression Regulation , Genes , HeLa Cells , Humans , Interleukin-1/biosynthesis , Lipopolysaccharides/pharmacology , Mice , Molecular Sequence Data , Monocytes/cytology , Nuclear Proteins/pharmacology , Protein Precursors/biosynthesis , Recombinant Proteins/biosynthesis , Regulatory Sequences, Nucleic Acid/genetics , Tetradecanoylphorbol Acetate/pharmacology , Transcription Factors/metabolism , Transcription, Genetic/drug effects , Transcriptional Activation , Transfection
10.
Mol Cell Biol ; 19(10): 6803-14, 1999 Oct.
Article in English | MEDLINE | ID: mdl-10490619

ABSTRACT

Potent induction of the gene coding for human prointerleukin 1beta (il1b) normally requires a far-upstream inducible enhancer in addition to a minimal promoter located between positions -131 and +12. The transcription factor Spi-1 (also called PU.1) is necessary for expression and binds to the minimal promoter, thus providing an essential transcription activation domain (TAD). In contrast, infection by human cytomegalovirus (HCMV) can strongly activate il1b via the expression of immediate early (IE) viral proteins and eliminates the requirement for the upstream enhancer. Spi-1 has been circumstantially implicated as a host factor in this process. We report here the molecular basis for the direct involvement of Spi-1 in HCMV activation of il1b. Transfection of Spi-1-deficient HeLa cells demonstrated both the requirement of Spi-1 for IE activity and the need for a shorter promoter (-59 to +12) than that required in the absence of IE proteins. Furthermore, in contrast to normal, enhancer-dependent il1b expression, which absolutely requires both the Spi-1 winged helix-turn-helix (wHTH) DNA-binding domain and the majority of the Spi-1 TAD, il1b expression in the presence of IE proteins does not require the Spi-1 TAD, which plays a synergistic role. In addition, we demonstrate that a single IE protein, IE2, is critical for the induction of il1b. Protein-protein interaction experiments revealed that the wing motif within the Spi-1 wHTH domain directly recruits IE2. In turn, IE2 physically associates with the Spi-1 wing and requires the integrity of at least one region of IE2. Functional analysis demonstrates that both this region and a carboxy-terminal acidic TAD are required for IE2 function. Therefore, we propose a protein-tethered transactivation mechanism in which the il1b promoter-bound Spi-1 wHTH tethers IE2, which provides a TAD, resulting in the transactivation of il1b.


Subject(s)
Immediate-Early Proteins/metabolism , Interleukin-1/genetics , Membrane Glycoproteins , Proto-Oncogene Proteins/metabolism , Trans-Activators/metabolism , Transcriptional Activation , Viral Envelope Proteins , Viral Proteins , Binding Sites , DNA-Binding Proteins/metabolism , Enhancer Elements, Genetic , HeLa Cells , Helix-Loop-Helix Motifs , Humans , Immediate-Early Proteins/genetics , Models, Genetic , Promoter Regions, Genetic , Protein Binding , Protein Structure, Secondary , Proto-Oncogene Proteins/deficiency , Proto-Oncogene Proteins/genetics , Trans-Activators/deficiency , Trans-Activators/genetics
11.
Mol Cell Biol ; 13(5): 2929-41, 1993 May.
Article in English | MEDLINE | ID: mdl-8474451

ABSTRACT

The hematopoietic-specific DNA-binding protein B1 binds to the DNA consensus sequence AAAGRGGAARYG located twice in intervening sequence 2 of both of the mouse beta-globin genes (D. L. Galson and D.E. Housman, Mol. Cell. Biol. 8:381-392, 1988). B1 was cloned by expression of a murine erythroleukemia (MEL) cell cDNA library in transfected COS cells and screening by electrophoretic mobility shift analysis. B1 is identical to the proto-oncogene Spi-1/PU.1 (Spi-1), an ets family member. Protein-DNA contacts are shown to resemble those of the helix-turn-helix homeodomain proteins. By Northern (RNA) analysis, we found that Spi-1 mRNA is present at low levels during murine CFU-E maturation and is at least 20-fold higher in uninduced MEL, a transformed proerythroblast-like cell line which contains an activating/transforming insertion of spleen focus-forming virus at the Spi-1 locus. Dimethyl sulfoxide-induced MEL cell differentiation decreases Spi-1 mRNA to approximately 20% of the uninduced level before commitment occurs. In addition to erythroid cells, Spi-1 mRNA is present in B cells, myelomonocytes, and mast cells but not in T cells and nonhematopoietic cell types. In situ hybridization demonstrated Spi-1 mRNA expression in bone marrow, spleen, interstitial nonhepatocytes of the liver, and interstitial nontubular cells of the testis. The Spi-1 locus was mapped on human chromosome 11 to the same interval as ACP2 (lysosomal acid phosphatase), between the anonymous DNA markers D11S33 and D11S14. This region has not yet been found to be associated with a human malignancy.


Subject(s)
DNA-Binding Proteins/genetics , DNA/metabolism , Erythrocytes/physiology , Globins/genetics , Hematopoietic Stem Cells/physiology , Multigene Family , Oncogenes , Proto-Oncogenes , Spleen/physiology , Testis/physiology , Transcription Factors/genetics , Amino Acid Sequence , Animals , Base Sequence , Cell Line , Chromosome Mapping , Chromosomes, Human, Pair 11 , DNA/genetics , DNA-Binding Proteins/metabolism , Gene Expression , Humans , In Situ Hybridization , Leukemia, Erythroblastic, Acute/genetics , Male , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Organ Specificity , Proto-Oncogene Mas , RNA, Messenger/genetics , RNA, Messenger/metabolism , Retroviridae Proteins, Oncogenic/genetics , Sequence Homology, Amino Acid , Sequence Homology, Nucleic Acid , Transcription Factors/metabolism , Transfection , Tumor Cells, Cultured
12.
Mol Cell Biol ; 12(8): 3439-48, 1992 Aug.
Article in English | MEDLINE | ID: mdl-1630455

ABSTRACT

Prointerleukin 1 beta (IL-1 beta) is a cytokine that mediates a broad range of biological activities. Genomic sequences that regulate IL-1 beta transcription include both inducible regulatory elements located more than 2,700 bp upstream of the transcriptional start site (cap site) and proximal elements located near the TATA box of this gene. In this study, we focused on the identification and characterization of trans-acting nuclear regulatory proteins that bind to the cap site-proximal region of the human IL-1 beta gene. We identified a protein, termed NFIL-1 beta A (NF beta A), that binds to a highly conserved 12-bp DNA sequence (-49 to -38) located upstream of the TATA box motif in both the human and murine IL-1 beta genes. The IL-1 alpha gene, which lacks a TATA motif, does not possess an NF beta A-binding sequence within the promoter region, suggesting that NF beta A may selectively regulate IL-1 beta expression. Using electrophoretic mobility shift assays, we identified several distinct DNA-protein complexes that are expressed in a cell-type-specific manner. In monocytic cell lines, the relative abundance of these complexes varies rapidly following stimulation of the cells with phorbol esters or lipopolysaccharide. UV cross-linking analysis identified two distinct DNA-binding polypeptides that comprise distinct complexes. The functional role of NF beta A was assessed in transient transfection assays. These data indicate that NF beta A is required for both basal and inducible promoter activity in monocytic cells. Furthermore, the human cytomegalovirus immediate-early 1 gene product requires the presence of NF beta A in order to trans-activate the proximal IL-1 beta promoter in a monocytic cell line. We propose that NF beta A is a factor that mediates either direct or indirect activation by the immediate-early 1 gene product. The proximity of this essential factor to the TATA motif suggests a possible role in transcriptional initiation.


Subject(s)
DNA-Binding Proteins/metabolism , Interleukin-1/genetics , Promoter Regions, Genetic , Protein Precursors/genetics , Transcription, Genetic , Transcriptional Activation , Animals , Base Sequence , Cell Line , Chloramphenicol O-Acetyltransferase/genetics , Chloramphenicol O-Acetyltransferase/metabolism , DNA Probes , Exons , Humans , Methylation , Mice , Molecular Sequence Data , Regulatory Sequences, Nucleic Acid , Restriction Mapping , Retroviridae Proteins, Oncogenic , Sequence Homology, Nucleic Acid , TATA Box , Transfection
13.
Cytokine Growth Factor Rev ; 9(3-4): 221-37, 1998.
Article in English | MEDLINE | ID: mdl-9918122

ABSTRACT

The interleukin 1 (IL-1) receptor is a critical component in mediating the inflammatory responses of IL-1, which affect nearly every cell type. Recently, major inroads have been made toward understanding the mechanism by which IL-1 interacts with its receptor and activates signal transduction. The receptor-ligand association has been visualized by X-ray crystal structure analysis, revealing intimate details that distinguish IL-1beta from the naturally-occuring receptor antagonist. Signaling studies have focused primarily on the ability of IL-1 to transduce the activation of the transcription factor, NF-kappaB, which is of central importance to inflammatory and immune responses. Virtually all of the effort has targeted the activation of a kinase which results in the phosphorylation of the inhibitory IkappaB molecule at two serines that precedes the proteolytic degradation of this inhibitor and the release of active NF-kappaB. The recent characterization of an IL-1 receptor associated kinase (IRAK) and a continuous molecular path between this kinase and that which directly phosphorylates IkappaB would seem to all but close the basic understanding of IL-1 receptor signal transduction. However, at least half of the IL-1-dependent NF-kappaB activation is independent of IRAK and uses a novel pathway involving the recruitment of phosphatidylinositol 3-kinase (PI3K) to a distinct site within the cytoplasmic domain of the IL-1 receptor. This novel pathway for NF-kappaB activation and the fact that other important transcription factors are also activated by an IL-1 receptor-dependent signal event, clearly defines additional mechanisms that influence inflammation.


Subject(s)
Receptors, Interleukin-1/physiology , Signal Transduction/immunology , Animals , Humans , Ligands , Models, Molecular , Protein Binding/immunology , Receptors, Interleukin-1/metabolism
14.
Curr Top Microbiol Immunol ; 211: 173-87, 1996.
Article in English | MEDLINE | ID: mdl-8585949

ABSTRACT

Further functional and biochemical characterization of the nuclear factor(s) which interacts with the EOS1 enhancer-like element in the IL-5R alpha promoter is currently in progress. Since different transcription factors recognize and interact with DNA in distinct fashions and with distinct structural motifs, we have modeled potential binding of the EOS1 factor to its cis-element based upon its methylation interference pattern (Fig. 2), using a cylindrical DNA helical projection (Fig. 6). Over a length of two helical turns, all nuclear protein contacts indicated by methylation interference map to one side of the DNA helix, suggesting that EOS1 binds in the major groove, across the minor groove, and on only one side of the helix. Further review of the model also reveals a potential diad symmetry for the binding site, suggestive of binding by a homodimer and consistent with the formation of the two DNA-protein complexes in our electrophoretic mobility shift experiments that could represent interactions with monomer versus dimer. Comparison of the EOS1 binding motif to similar models for the binding of other transcription factor families for which structural crystallographic and/or binding data is available suggests a similarity of the EOS1 complex to that of the bacterial helix-turn-helix phage lambda and 434 repressor-operator complexes, and the Cys4 zinc finger glucocorticoid response element (GRE) DNA-binding motifs, all of which show similar diad symmetry and binding in the major groove on one side of the DNA. The possibility that EOS1 functions as a GRE is being investigated, especially since there is a consensus AP-1 site at bp -440 to -432 of the IL-5R alpha promoter, immediately adjacent to the EOS1 binding site (see Fig. 5 in reference [36]) and AP-1/GRE interactions have been identified for composite response elements in the regulation of a number of different genes. The identification or cloning of EOS1, a potentially novel and eosinophil lineage-active transcription factor, should enhance our understanding of the processes involved in eosinophil development in particular and myeloid lineage commitment and differentiation in general.


Subject(s)
Enhancer Elements, Genetic , Eosinophils/physiology , Gene Expression Regulation , Hematopoiesis/genetics , Promoter Regions, Genetic , Receptors, Interleukin/genetics , Animals , Base Sequence , Humans , Molecular Sequence Data , Receptors, Interleukin-5
15.
FEBS Lett ; 438(1-2): 49-54, 1998 Oct 30.
Article in English | MEDLINE | ID: mdl-9821957

ABSTRACT

Interleukin 1 (IL-1) delivers a stimulatory signal which increases the expression of a set of genes by modulating the transcription factor NF-kappaB. The IL-1 receptors are transmembrane glycoproteins which lack a catalytic domain. The C-terminal portion of the type I IL-1 receptor (IL-IRI) is essential for IL-1 signalling and for IL-1 dependent activation of NF-kappaB. This portion contains a putative phosphatidylinositol 3-kinase (PI 3-kinase) binding domain (Tyr-E-X-Met), which is highly conserved between the human, mouse and chicken sequences, as well as the related cytoplasmic domain of the Drosophila receptor Toll. This observation prompted us to investigate the role of PI 3-kinase in IL-1 signalling. Here we report evidence that PI 3-kinase is recruited by the activated IL-IRI, causing rapid and transient activation of PI 3-kinase. We also show that the receptor is tyrosine phosphorylated in response to IL-1. Expression of a receptor mutant lacking the putative binding site for p85 demonstrates that Tyr479 in the receptor cytoplasmic domain is essential for PI 3-kinase activation by IL-1. Our results indicate that PI 3-kinase is likely to be an important mediator of some IL-1 effects, providing docking sites for additional signalling molecules.


Subject(s)
Interleukin-1/pharmacology , Phosphatidylinositol 3-Kinases/metabolism , Receptors, Interleukin-1/metabolism , Binding Sites , Consensus Sequence , Enzyme Activation , Humans , Interleukin-1/metabolism , NF-kappa B/metabolism , Osteosarcoma , Phosphorylation , Phosphotyrosine/metabolism , Precipitin Tests , Protein Binding , Receptors, Interleukin-1/chemistry , Receptors, Interleukin-1 Type I , Transcriptional Activation , Transfection , Tumor Cells, Cultured , Tyrosine/metabolism , src Homology Domains/physiology
16.
Biotechniques ; 6(4): 347-53, 1988 Apr.
Article in English | MEDLINE | ID: mdl-3273857

ABSTRACT

The Nucleic Acid Blot Analyzer, a new instrument providing high-speed imaging of 32P labeled nucleic acids, captures, stores and presents images in digital form, thus lending itself to rapid data handling and analysis as well as replacing conventional X-ray film autoradiography for many applications. A software package called ANALYZE has been specifically designed for the instrument in order to provide automatic or semi-automatic analysis for molecular biological techniques. The software includes image display manipulation, quantitative and positional analysis, as well as file maintenance utilities. The specific application of the software/hardware to various techniques is presented.


Subject(s)
Nucleic Acid Hybridization , Nucleic Acids/analysis , Software , Molecular Biology
17.
J Dent Res ; 80(2): 400-7, 2001 Feb.
Article in English | MEDLINE | ID: mdl-11332522

ABSTRACT

This review examines a well-characterized factor, interleukin 1 (IL-1), that has recently received considerable attention. A level of understanding is emerging that goes beyond simple recognition that IL-1 plays a role in disease, and begins to explain the molecular mechanisms of function. This review summarizes some current information on the importance of IL-1 in periodontitis as well as the signal transduction of IL-1, from binding to its cell-surface receptors, to the activation of cytoplasmic mediators and transcription factors responsible for the induction of target genes. The effect of IL-1 signal transduction is ultimately the activation and repression of specific transcription factors that regulate genes responsible for cellular activities. As additional steps of signal transduction become better-characterized, these insights may facilitate the development of improved therapeutic approaches for controlling inflammation and connective tissue destruction in a variety of diseases.


Subject(s)
Drosophila Proteins , Interleukin-1/physiology , Periodontitis/metabolism , Receptors, Immunologic , Signal Transduction/physiology , Adaptor Proteins, Signal Transducing , Animals , Antigens, Differentiation/metabolism , Humans , Interleukin-1/genetics , Interleukin-1 Receptor-Associated Kinases , Membrane Glycoproteins/metabolism , Myeloid Differentiation Factor 88 , Periodontitis/genetics , Polymorphism, Genetic , Protein Kinases/metabolism , Proteins/metabolism , Receptors, Cell Surface/metabolism , Receptors, Interleukin-1/metabolism , TNF Receptor-Associated Factor 6 , Toll-Like Receptors , Transcriptional Activation
18.
Lipids ; 31 Suppl: S23-31, 1996 Mar.
Article in English | MEDLINE | ID: mdl-8729089

ABSTRACT

n-3 Polyunsaturated fatty acids abundant in marine lipids suppress certain inflammatory and immune reactions, and dietary marine lipid supplements have antiinflammatory effects in experimental and human autoimmune disease. Previous work by other investigators demonstrated that dietary marine lipid supplements suppressed production of cytokines from stimulated human peripheral blood mononuclear cells ex vivo. The present study further documents the ability of n-3 fatty acids to inhibit cytokine formation, and in part defines the mechanism of the inhibition of production of interleukin-1 beta (IL-1 beta) by dietary n-3 fatty acid. Female BALB/c mice were each fed a fat-free balanced diet to which was added either a refined fish oil (FO) preparation as a source of n-3 fatty acid, or beef tallow (BT), which consisted primarily of saturated and monoenoic fatty acids. After ingesting the experimental diets for periods ranging from 3 to 12 wk. spleen cell preparations were stimulated ex vivo with either lipopolysaccharide (LPS) or phorbol 12-myristate 13-acetate (PMA), and proIL-1 beta mRNA (IL-1 beta mRNA) was measured by northern analysis. Levels of IL-1 beta mRNA in both LPS- and PMA-stimulated cells from BT-fed mice were elevated to a greater extent than in cells from FO-fed mice, at most concentrations of LPS and PMA. Stability of LPS-stimulated mRNA levels after actinomycin D was similar for BT and FO groups, indicating that lower levels of IL-1 mRNA with FO groups was related to suppressed IL-1 gene transcription and not due to accelerated transcript degradation. Nuclear run-on transcription assays revealed a more transient expression of the IL-1 beta gene in LPS-stimulated spleen cells from FO-fed mice compared to cells from BT-fed mice. We conclude that dietary marine lipids reduce transient expression of the IL-1 beta gene in stimulated splenic monocytic cells. Preliminary results from nuclear run-on transcription assays indicate that n-3 fatty acids may not change the initial rate of gene transcription but may promote more rapid shutting down of transcription of this gene after induction than do alternative lipids.


Subject(s)
Dietary Fats/pharmacology , Fatty Acids, Omega-3/pharmacology , Interleukin-1/genetics , RNA, Messenger/metabolism , Spleen/metabolism , Transcription, Genetic , Animals , Female , Lipopolysaccharides/pharmacology , Mice , Mice, Inbred BALB C , Phospholipids/metabolism , Spleen/cytology , Tetradecanoylphorbol Acetate/pharmacology
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