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1.
Alcohol Clin Exp Res ; 44(4): 820-830, 2020 04.
Article in English | MEDLINE | ID: mdl-32090358

ABSTRACT

BACKGROUND: Genetic factors significantly affect alcohol consumption and vulnerability to withdrawal. Furthermore, some genetic models showing predisposition to severe withdrawal are also predisposed to low ethanol (EtOH) consumption and vice versa, even when tested independently in naïve animals. METHODS: Beginning with a C57BL/6J × DBA/2J F2 intercross founder population, animals were simultaneously selectively bred for both high alcohol consumption and low acute withdrawal (SOT line), or vice versa (NOT line). Using randomly chosen fourth selected generation (S4) mice (N = 18-22/sex/line), RNA-Seq was employed to assess genome-wide gene expression in ventral striatum. The MegaMUGA array was used to detect genome-wide genotypic differences. Differential gene expression and the weighted gene co-expression network analysis were implemented as described elsewhere (Genes Brain Behav 16, 2017, 462). RESULTS: The new selection of the SOT and NOT lines was similar to that reported previously (Alcohol Clin Exp Res 38, 2014, 2915). One thousand eight hundred and sixteen transcripts were detected as differentially expressed between the lines. For genes more highly expressed in the SOT line, there was enrichment in genes associated with cell adhesion, synapse organization, and postsynaptic membrane. The genes with a cell adhesion annotation included 23 protocadherins, Mpdz and Dlg2. Genes with a postsynaptic membrane annotation included Gabrb3, Gphn, Grid1, Grin2b, Grin2c, and Grm3. The genes more highly expressed in the NOT line were enriched in a network module (red) with annotations associated with mitochondrial function. Several of these genes were module hub nodes, and these included Nedd8, Guk1, Elof1, Ndufa8, and Atp6v1f. CONCLUSIONS: Marked effects of selection on gene expression were detected. The NOT line was characterized by higher expression of hub nodes associated with mitochondrial function. Genes more highly expressed in the SOT aligned with previous findings, for example, Colville and colleagues (Genes Brain Behav 16, 2017, 462) that both high EtOH preference and consumption are associated with effects on cell adhesion and glutamate synaptic plasticity.


Subject(s)
Alcohol Drinking/genetics , Behavior, Animal , Central Nervous System Depressants/administration & dosage , Ethanol/administration & dosage , Substance Withdrawal Syndrome/genetics , Animals , Central Nervous System Depressants/adverse effects , Ethanol/adverse effects , Gene Expression Profiling , Guanylate Kinases/genetics , Membrane Proteins/genetics , Mice , Models, Genetic , NADH Dehydrogenase/genetics , NEDD8 Protein/genetics , Protocadherins/genetics , RNA-Seq , Receptors, GABA-A/genetics , Receptors, Glutamate/genetics , Receptors, Metabotropic Glutamate/genetics , Receptors, N-Methyl-D-Aspartate/genetics , Substance Withdrawal Syndrome/etiology , Vacuolar Proton-Translocating ATPases/genetics
2.
BMC Genomics ; 17: 313, 2016 Apr 29.
Article in English | MEDLINE | ID: mdl-27129385

ABSTRACT

BACKGROUND: Opioids are a mainstay for the treatment of chronic pain. Unfortunately, therapy-limiting maladaptations such as loss of treatment effect (tolerance), and paradoxical opioid-induced hyperalgesia (OIH) can occur. The objective of this study was to identify genes responsible for opioid tolerance and OIH. RESULTS: These studies used a well-established model of ascending morphine administration to induce tolerance, OIH and other opioid maladaptations in 23 strains of inbred mice. Genome-wide computational genetic mapping was then applied to the data in combination with a false discovery rate filter. Transgenic mice, gene expression experiments and immunoprecipitation assays were used to confirm the functional roles of the most strongly linked gene. The behavioral data processed using computational genetic mapping and false discovery rate filtering provided several strongly linked biologically plausible gene associations. The strongest of these was the highly polymorphic Mpdz gene coding for the post-synaptic scaffolding protein Mpdz/MUPP1. Heterozygous Mpdz +/- mice displayed reduced opioid tolerance and OIH. Mpdz gene expression and Mpdz/MUPP1 protein levels were lower in the spinal cords of low-adapting 129S1/Svlm mice than in high-adapting C57BL/6 mice. Morphine did not alter Mpdz expression levels. In addition, association of Mpdz/MUPP1 with its known binding partner CaMKII did not differ between these high- and low-adapting strains. CONCLUSIONS: The degrees of maladaptive changes in response to repeated administration of morphine vary greatly across inbred strains of mice. Variants of the multiple PDZ domain gene Mpdz may contribute to the observed inter-strain variability in tolerance and OIH by virtue of changes in the level of their expression.


Subject(s)
Carrier Proteins/genetics , Drug Tolerance/genetics , Hyperalgesia/genetics , Morphine/adverse effects , PDZ Domains , Analgesics, Opioid/adverse effects , Animals , Chromosome Mapping , Dose-Response Relationship, Drug , Gene Knockdown Techniques , Haplotypes , Hyperalgesia/chemically induced , Male , Membrane Proteins , Mice, Inbred Strains , Mice, Transgenic , Morphine Dependence/genetics , Polymorphism, Single Nucleotide
3.
Alcohol Clin Exp Res ; 40(4): 857-64, 2016 Apr.
Article in English | MEDLINE | ID: mdl-27012303

ABSTRACT

BACKGROUND: G protein-gated inwardly rectifying potassium (GIRK) channels contribute to the effects of a number of drugs of abuse, including ethanol. However, the roles of individual subunits in the rewarding effects of ethanol are poorly understood. METHODS: We compare conditioned place preference (CPP) in GIRK3 subunit knock-out (GIRK3(-/-)), heterozygote (GIRK3(+/-)), and wild-type (WT) mice. In addition, the development of locomotor tolerance/sensitization and the effects of EtOH intoxication on associative learning (fear conditioning) are also assessed. RESULTS: Our data show significant EtOH CPP in GIRK3(-/-) and GIRK3(+/-) mice, but not in the WT littermates. In addition, we demonstrate that these effects are not due to differences in EtOH metabolism, the development of EtOH tolerance/sensitivity, or associative learning abilities. While there were no consistent genotype differences in the fear conditioning assay, our data do show a selective sensitization of the impairing effects of EtOH intoxication on contextual learning, but no effect on cued learning. CONCLUSIONS: These findings suggest that GIRK3 plays a role in EtOH reward. Furthermore, the selectivity of this effect suggests that GIRK channels could be an effective therapeutic target for the prevention and/or treatment of alcoholism.


Subject(s)
Ethanol/administration & dosage , G Protein-Coupled Inwardly-Rectifying Potassium Channels/deficiency , G Protein-Coupled Inwardly-Rectifying Potassium Channels/genetics , Reward , Animals , Association Learning/drug effects , Association Learning/physiology , Conditioning, Psychological/drug effects , Conditioning, Psychological/physiology , Male , Mice , Mice, Inbred C57BL , Mice, Knockout
4.
Occup Ther Health Care ; 30(1): 16-28, 2016.
Article in English | MEDLINE | ID: mdl-26053430

ABSTRACT

The Safe at Home Screening (SAH) is an occupational therapy assessment tool designed to quickly assess home safety awareness and skills through the use of mock hazardous situations in a kitchen setting. The SAH has been standardized on community-dwelling adults. This research project involves psychometric analyses using the SAH on a sample of adults with acquired brain injuries (ABI; N = 31), and compares their SAH outcome scores with those of the Kohlman Evaluation of Living Skills (KELS). The scores on the two tests were found to be moderately correlated. An aspect of content validity was explored by asking the clients' occupational therapists to make predictions about their clients' functioning in the realm of home safety. Correlations between the expert opinions of potential client scores and actual SAH test scores were moderate.


Subject(s)
Activities of Daily Living , Awareness , Brain Injuries , Mass Screening/methods , Occupational Therapy/methods , Safety , Adolescent , Adult , Humans , Independent Living , Middle Aged , Psychometrics , Reproducibility of Results , Young Adult
5.
Alcohol Clin Exp Res ; 39(2): 282-90, 2015 Feb.
Article in English | MEDLINE | ID: mdl-25684050

ABSTRACT

BACKGROUND: Alcohol affects many of the brain regions and neural processes that support learning and memory, and these effects are thought to underlie, at least in part, the development of addiction. Although much work has been done regarding the effects of alcohol intoxication on learning and memory, little is known about the effects of acute withdrawal from a single alcohol exposure. METHODS: We assess the effects of acute ethanol withdrawal (6 hours postinjection with 4 g/kg ethanol) on 2 forms of fear conditioning (delay and trace fear conditioning) in C57BL/6J and DBA/2J mice. The influence of a number of experimental parameters (pre- and post training withdrawal exposure; foreground/background processing; training strength; and nonassociative effects) is also investigated. RESULTS: Acute ethanol withdrawal during training had a bidirectional effect on fear-conditioned responses, decreasing contextual responses and increasing cued responses. These effects were apparent for both trace and delay conditioning in DBA/2J mice and for trace conditioning in C57BL/6J mice; however, C57BL/6J mice were selectively resistant to the effects of acute withdrawal on delay cued responses. CONCLUSIONS: Our results show that acute withdrawal from a single, initial ethanol exposure is sufficient to alter long-term learning in mice. In addition, the differences between the strains and conditioning paradigms used suggest that specific learning processes can be differentially affected by acute withdrawal in a manner that is distinct from the reported effects of both alcohol intoxication and withdrawal following chronic alcohol exposure. Thus, our results suggest a unique effect of acute alcohol withdrawal on learning and memory processes.


Subject(s)
Behavior, Animal/drug effects , Central Nervous System Depressants/pharmacology , Conditioning, Psychological/drug effects , Ethanol/pharmacology , Fear , Substance Withdrawal Syndrome , Animals , Central Nervous System Depressants/adverse effects , Ethanol/adverse effects , Learning/drug effects , Male , Mice , Mice, Inbred C57BL , Mice, Inbred DBA
6.
Addict Biol ; 20(1): 143-7, 2015 Jan.
Article in English | MEDLINE | ID: mdl-24118405

ABSTRACT

Association studies implicate multiple PDZ domain protein (MPDZ/MUPP1) sequence and/or expression in risk for alcoholism in humans and ethanol withdrawal (EW) in mice, but confirmation has been hindered by the dearth of targeted genetic models. We report the creation of transgenic (MPDZ-TG) and knockout heterozygote (Mpdz(+/-) ) mice, with increased (2.9-fold) and decreased (53%) target expression, respectively. Both models differ in EW compared with wild-type littermates (P ≤ 0.03), providing compelling evidence for an inverse relationship between Mpdz expression and EW severity. Additionally, ethanol consumption is reduced up to 18% (P = 0.006) in Mpdz(+/-) , providing the first evidence implicating Mpdz in ethanol self-administration.


Subject(s)
Alcohol Drinking/genetics , Alcohol Withdrawal Seizures/genetics , Carrier Proteins/genetics , Central Nervous System Depressants/adverse effects , Ethanol/adverse effects , Alcohol Withdrawal Seizures/etiology , Animals , Gene Knockdown Techniques , Membrane Proteins , Mice , Mice, Transgenic , Substance Withdrawal Syndrome/etiology , Substance Withdrawal Syndrome/genetics
7.
Learn Mem ; 21(8): 380-93, 2014 Aug.
Article in English | MEDLINE | ID: mdl-25031364

ABSTRACT

Strain comparison studies have been critical to the identification of novel genetic and molecular mechanisms in learning and memory. However, even within a single learning paradigm, the behavioral data for the same strain can vary greatly, making it difficult to form meaningful conclusions at both the behavioral and cellular level. In fear conditioning, there is a high level of variability across reports, especially regarding responses to the conditioned stimulus (CS). Here, we compare C57BL/6 and DBA/2 mice using delay fear conditioning, trace fear conditioning, and a nonassociative condition. Our data highlight both the significant strain differences apparent in these fear conditioning paradigms and the significant differences in conditioning type within each strain. We then compare our data to an extensive literature review of delay and trace fear conditioning in these two strains. Finally, we apply a number of commonly used baseline normalization approaches to compare how they alter the reported differences. Our findings highlight three major sources of variability in the fear conditioning literature: CS duration, number of CS presentations, and data normalization to baseline measures.


Subject(s)
Conditioning, Psychological/physiology , Fear/physiology , Animals , Electroshock , Foot , Freezing Reaction, Cataleptic/physiology , Grooming/physiology , Male , Mice, Inbred C57BL , Mice, Inbred DBA , Motor Activity/physiology , Neuropsychological Tests , Species Specificity
8.
Mamm Genome ; 25(1-2): 12-22, 2014 Feb.
Article in English | MEDLINE | ID: mdl-24374554

ABSTRACT

Complex Mus musculus crosses provide increased resolution to examine the relationships between gene expression and behavior. While the advantages are clear, there are numerous analytical and technological concerns that arise from the increased genetic complexity that must be considered. Each of these issues is discussed, providing an initial framework for complex cross study design and planning.


Subject(s)
Crosses, Genetic , Gene Expression , Genetics, Behavioral , Quantitative Trait, Heritable , Animals , Genetics, Population , Genomics/methods , Mice , Phenotype , Quantitative Trait Loci
9.
Alcohol Clin Exp Res ; 38(12): 2915-24, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25581648

ABSTRACT

BACKGROUND: Data from C57BL/6J (B6) × DBA/2J (D2) F2 intercrosses (B6xD2 F2 ), standard and recombinant inbred strains, and heterogeneous stock mice indicate that a reciprocal (or inverse) genetic relationship exists between alcohol consumption and withdrawal severity. Furthermore, some genetic studies have detected reciprocal quantitative trait loci (QTLs) for these traits. We used a novel mouse model developed by simultaneous selection for both high alcohol consumption/low withdrawal and low alcohol consumption/high withdrawal and analyzed the gene expression and genome-wide genotypic differences. METHODS: Randomly chosen third selected generation (S3 ) mice (N = 24/sex/line), bred from a B6xD2 F2 , were genotyped using the Mouse Universal Genotyping Array, which provided 2,760 informative markers. QTL analysis used a marker-by-marker strategy with the threshold for a significant log of the odds (LOD) set at 10. Gene expression in the ventral striatum was measured using the Illumina Mouse 8.2 array. Differential gene expression and the weighted gene co-expression network analysis (WGCNA) were implemented. RESULTS: Significant QTLs for consumption/withdrawal were detected on chromosomes (Chr) 2, 4, 9, and 12. A suggestive QTL mapped to Chr 6. Some of the QTLs overlapped with known QTLs mapped for 1 of the traits individually. One thousand seven hundred and forty-five transcripts were detected as being differentially expressed between the lines; there was some overlap with known withdrawal genes (e.g., Mpdz) located within QTL regions. WGCNA revealed several modules of co-expressed genes showing significant effects in both differential expression and intramodular connectivity; a module richly annotated with kinase-related annotations was most affected. CONCLUSIONS: Marked effects of selection on expression and network structure were detected. QTLs overlapping with differentially expressed genes on Chr 2 (distal) and 4 suggest that these are cis-eQTLs (Chr 2: Kif3b, Kcnq2; Chr 4: Mpdz, Snapc3). Other QTLs identified were on Chr 2 (proximal), 9, and 12. Network results point to involvement of kinase-related mechanisms and outline the need for further efforts such as interrogation of noncoding RNAs.


Subject(s)
Alcohol Drinking/genetics , Breeding/methods , Gene Regulatory Networks/genetics , Quantitative Trait Loci/genetics , Substance Withdrawal Syndrome/genetics , Transcription, Genetic/genetics , Alcohol Drinking/pathology , Animals , Female , Male , Mice , Mice, Inbred C57BL , Mice, Inbred DBA , Species Specificity , Substance Withdrawal Syndrome/pathology
10.
Synapse ; 67(6): 280-9, 2013 Jun.
Article in English | MEDLINE | ID: mdl-23345080

ABSTRACT

α-Synuclein (α-syn) protein and endocannabinoid CB1 receptors are primarily located in presynaptic terminals. An association between α-syn and CB1 receptors has recently been established in Parkinson's disease, but it is completely unknown whether there is an association between these two proteins in alcohol addiction. Therefore, we aimed to examine the α-syn mRNA transcript and protein expression levels in the prefrontal cortex, striatum, amygdala and hippocampus. These brain regions are the most frequently implicated in alcohol and other drug addiction. In these studies, we used C57BL/6 mice carrying a spontaneous deletion of the α-syn gene (C57BL/6(Snca-/-) ) and their respective controls (C57BL/6(Snca) (+/) (+) ). These animals were monitored for spontaneous alcohol consumption (3-10%) and their response to a hypnotic-sedative dose of alcohol (3 g kg(-1) ) was also assessed. Compared with the C57BL/6(Snca+/+) mice, we found that the C57BL/6(Snca-/-) mice exhibited a higher expression level of the CB1 mRNA transcript and CB1 receptor in the hippocampus and amygdala. Furthermore, C57BL/6(Snca-/-) mice showed an increase in alcohol consumption when offered a 10% alcohol solution. There was no significant difference in sleep time after the injection of 3 g/kg alcohol. These results are the first to reveal an association between α-syn and the CB1 receptor in the brain regions that are most frequently implicated in alcohol and other drug addictions.


Subject(s)
Alcohol Drinking/genetics , Amygdala/metabolism , Hippocampus/metabolism , Receptor, Cannabinoid, CB1/metabolism , Transcription, Genetic , alpha-Synuclein/genetics , Amygdala/physiology , Animals , Ethanol/pharmacology , Gene Deletion , Hippocampus/physiology , Mice , Mice, Inbred C57BL , Prefrontal Cortex/metabolism , Prefrontal Cortex/physiology , RNA, Messenger/genetics , RNA, Messenger/metabolism , Receptor, Cannabinoid, CB1/genetics , Sleep/drug effects , alpha-Synuclein/metabolism
11.
Nat Genet ; 36(11): 1133-7, 2004 Nov.
Article in English | MEDLINE | ID: mdl-15514660

ABSTRACT

The goal of the Complex Trait Consortium is to promote the development of resources that can be used to understand, treat and ultimately prevent pervasive human diseases. Existing and proposed mouse resources that are optimized to study the actions of isolated genetic loci on a fixed background are less effective for studying intact polygenic networks and interactions among genes, environments, pathogens and other factors. The Collaborative Cross will provide a common reference panel specifically designed for the integrative analysis of complex systems and will change the way we approach human health and disease.


Subject(s)
Breeding , Health Resources , Mice, Inbred Strains , Animals , Community Networks , Crosses, Genetic , Databases, Genetic , Health Services Research , Humans , Mice , Recombination, Genetic
12.
Alcohol Clin Exp Res ; 35(10): 1739-48, 2011 Oct.
Article in English | MEDLINE | ID: mdl-21615425

ABSTRACT

BACKGROUND: Different regions of the striatum may have distinct roles in acute intoxication, alcohol seeking, dependence, and withdrawal. METHODS: The recent advances are reviewed and discussed in our understanding of the role of the dorsolateral striatum (DLS), dorsomedial striatum (DMS), and ventral striatum in behavioral responses to alcohol, including alcohol craving in abstinent alcoholics, and alcohol consumption and withdrawal in rat, mouse, and nonhuman primate models. RESULTS: Reduced neuronal activity as well as dysfunctional connectivity between the ventral striatum and the dorsolateral prefrontal cortex is associated with alcohol craving and impairment of new learning processes in abstinent alcoholics. Within the DLS of mice and nonhuman primates withdrawn from alcohol after chronic exposure, glutamatergic transmission in striatal projection neurons is increased, while GABAergic transmission is decreased. Glutamatergic transmission in DMS projection neurons is also increased in ethanol withdrawn rats. Ex vivo or in vivo ethanol exposure and withdrawal causes a long-lasting increase in NR2B subunit-containing NMDA receptor activity in the DMS, contributing to ethanol drinking. Analyses of neuronal activation associated with alcohol withdrawal and site-directed lesions in mice implicate the rostroventral caudate putamen, a ventrolateral segment of the DMS, in genetically determined differences in risk for alcohol withdrawal involved in physical association of the multi-PDZ domain protein, MPDZ, with 5-HT(2C) receptors and/or NR2B. CONCLUSIONS: Alterations of dopaminergic, glutamatergic, and GABAergic signaling within different regions of the striatum by alcohol is critical for alcohol craving, consumption, dependence, and withdrawal in humans and animal models.


Subject(s)
Alcohol Drinking/physiopathology , Alcoholism/physiopathology , Basal Ganglia/physiopathology , Corpus Striatum/physiopathology , Neostriatum/physiopathology , Animals , Central Nervous System Depressants/adverse effects , Central Nervous System Depressants/toxicity , Disease Models, Animal , Ethanol/adverse effects , Ethanol/toxicity , Humans , Mice , Rats , Substance Withdrawal Syndrome/physiopathology
13.
J Neurosci ; 29(37): 11662-73, 2009 Sep 16.
Article in English | MEDLINE | ID: mdl-19759313

ABSTRACT

Here, we map a quantitative trait locus (QTL) with a large effect on predisposition to barbiturate (pentobarbital) withdrawal to a 0.44 Mb interval of mouse chromosome 1 syntenic with human 1q23.2. We report a detailed analysis of the genes within this interval and show that it contains 15 known and predicted genes, 12 of which demonstrate validated genotype-dependent transcript expression and/or nonsynonymous coding sequence variation that may underlie the influence of the QTL on withdrawal. These candidates are involved in diverse cellular functions including intracellular trafficking, potassium conductance and spatial buffering, and multimolecular complex dynamics, and indicate both established and novel aspects of neurobiological response to sedative-hypnotics. This work represents a substantial advancement toward identification of the gene(s) that underlie the phenotypic effects of the QTL. We identify Kcnj9 as a particularly promising candidate and report the development of a Kcnj9-null mutant model that exhibits significantly less severe withdrawal from pentobarbital as well as other sedative-hypnotics (zolpidem and ethanol) versus wild-type littermates. Reduced expression of Kcnj9, which encodes GIRK3 (Kir3.3), is associated with less severe sedative-hypnotic withdrawal. A multitude of QTLs for a variety of complex traits, including diverse responses to sedative-hypnotics, have been detected on distal chromosome 1 in mice, and as many as four QTLs on human chromosome 1q have been implicated in human studies of alcohol dependence. Thus, our results will be primary to additional efforts to identify genes involved in a wide variety of behavioral responses to sedative-hypnotics and may directly facilitate progress in human genetics.


Subject(s)
Chromosome Mapping , Ethanol/adverse effects , G Protein-Coupled Inwardly-Rectifying Potassium Channels/physiology , Pentobarbital/adverse effects , Pyridines/adverse effects , Substance Withdrawal Syndrome/genetics , Animals , Area Under Curve , Behavior, Animal , Brain/metabolism , Brain/pathology , Chromosomes, Human, Pair 1 , DNA Mutational Analysis , Disease Models, Animal , G Protein-Coupled Inwardly-Rectifying Potassium Channels/deficiency , Gene Expression Regulation/genetics , Gene Frequency , Genetic Predisposition to Disease , Genotype , Humans , Mice , Mice, Inbred C57BL , Mice, Inbred DBA , Mice, Knockout , Polymorphism, Single Nucleotide/genetics , Quantitative Trait Loci , Substance Withdrawal Syndrome/pathology , Zolpidem
14.
Addict Biol ; 15(2): 185-99, 2010 Apr.
Article in English | MEDLINE | ID: mdl-20148779

ABSTRACT

Evidence for genetic linkage to alcohol and other substance dependence phenotypes in areas of the human and mouse genome have now been reported with some consistency across studies. However, the question remains as to whether the genes that underlie the alcohol-related behaviors seen in mice are the same as those that underlie the behaviors observed in human alcoholics. The aims of the current set of analyses were to identify a small set of alcohol-related phenotypes in human and in mouse by which to compare quantitative trait locus (QTL) data between the species using syntenic mapping. These analyses identified that QTLs for alcohol consumption and acute and chronic alcohol withdrawal on distal mouse chromosome 1 are syntenic to a region on human chromosome 1q where a number of studies have identified QTLs for alcohol-related phenotypes. Additionally, a QTL on human chromosome 15 for alcohol dependence severity/withdrawal identified in two human studies was found to be largely syntenic with a region on mouse chromosome 9, where two groups have found QTLs for alcohol preference. In both of these cases, while the QTLs were found to be syntenic, the exact phenotypes between humans and mice did not necessarily overlap. These studies demonstrate how this technique might be useful in the search for genes underlying alcohol-related phenotypes in multiple species. However, these findings also suggest that trying to match exact phenotypes in humans and mice may not be necessary or even optimal for determining whether similar genes influence a range of alcohol-related behaviors between the two species.


Subject(s)
Alcoholism/genetics , Phenotype , Animals , Carrier Proteins/genetics , Choice Behavior , Chromosomes, Human, Pair 15/genetics , Disease Models, Animal , Genetic Linkage/genetics , Humans , Membrane Proteins , Mice , Quantitative Trait Loci/genetics , Species Specificity
15.
Lab Anim (NY) ; 39(1): 23-5, 2010 Jan.
Article in English | MEDLINE | ID: mdl-20023678

ABSTRACT

Imaging studies that use rodents sometimes involve intraperitoneal administration of pharmacological compounds. To facilitate such studies, the authors developed a simple and easily mastered technique for placing an intraperitoneal catheter in a conscious mouse. This technique eliminates the need to remove the animal from the scanner to administer a drug through the intraperitoneal route.


Subject(s)
Catheterization/methods , Catheters, Indwelling , Laboratory Animal Science/methods , Pharmaceutical Preparations/administration & dosage , Animals , Injections, Intraperitoneal , Magnetic Resonance Imaging , Mice , Models, Animal , Peritoneal Cavity , Positron-Emission Tomography
16.
J Neurosci ; 28(39): 9840-9, 2008 Sep 24.
Article in English | MEDLINE | ID: mdl-18815268

ABSTRACT

Physiological dependence and associated withdrawal episodes are thought to constitute a motivational force that sustains ethanol (alcohol) use/abuse and may contribute to relapse in alcoholics. Although no animal model duplicates alcoholism, models for specific factors, like the withdrawal syndrome, are useful for identifying potential genetic and neural determinants of liability in humans. We generated congenic mice that confirm a quantitative trait locus (QTL) on chromosome 4 with a large effect on predisposition to alcohol withdrawal. Using c-Fos expression as a high-resolution marker of neuronal activation, congenic mice demonstrated significantly less neuronal activity associated with ethanol withdrawal than background strain mice in the substantia nigra pars reticulata (SNr), subthalamic nucleus (STN), rostromedial lateral globus pallidus, and ventral pallidum. Notably, neuronal activation in subregions of the basal ganglia associated with limbic function was more intense than in subregions associated with sensorimotor function. Bilateral lesions of caudolateral SNr attenuated withdrawal severity after acute and repeated ethanol exposures, whereas rostrolateral SNr and STN lesions did not reduce ethanol withdrawal severity. Caudolateral SNr lesions did not affect pentylenetetrazol-enhanced convulsions. Our results suggest that this QTL impacts ethanol withdrawal via basal ganglia circuitry associated with limbic function and that the caudolateral SNr plays a critical role. These are the first analyses to elucidate circuitry by which a confirmed addiction-relevant QTL influences behavior. This mouse QTL is syntenic with human chromosome 9p. Given the growing body of evidence that a gene(s) on chromosome 9p influences alcoholism, our results can facilitate human research on alcohol dependence and withdrawal.


Subject(s)
Alcohol Withdrawal Seizures/genetics , Basal Ganglia/physiopathology , Chromosomes, Human, Pair 4 , Ethanol/adverse effects , Alcohol Withdrawal Seizures/chemically induced , Alcohol Withdrawal Seizures/pathology , Analysis of Variance , Animals , Basal Ganglia/injuries , Basal Ganglia/metabolism , Basal Ganglia/pathology , Disease Models, Animal , Electrolysis/methods , Ethanol/administration & dosage , Gene Expression Regulation/drug effects , Humans , Mice , Mice, Congenic , Models, Biological , Pentylenetetrazole , Proto-Oncogene Proteins c-fos/metabolism , Quantitative Trait Loci , Statistics, Nonparametric
17.
BMC Genomics ; 10: 379, 2009 Aug 17.
Article in English | MEDLINE | ID: mdl-19686600

ABSTRACT

BACKGROUND: Allelic variation is the cornerstone of genetically determined differences in gene expression, gene product structure, physiology, and behavior. However, allelic variation, particularly cryptic (unknown or not annotated) variation, is problematic for follow up analyses. Polymorphisms result in a high incidence of false positive and false negative results in hybridization based analyses and hinder the identification of the true variation underlying genetically determined differences in physiology and behavior. Given the proliferation of mouse genetic models (e.g., knockout models, selectively bred lines, heterogeneous stocks derived from standard inbred strains and wild mice) and the wealth of gene expression microarray and phenotypic studies using genetic models, the impact of naturally-occurring polymorphisms on these data is critical. With the advent of next-generation, high-throughput sequencing, we are now in a position to determine to what extent polymorphisms are currently cryptic in such models and their impact on downstream analyses. RESULTS: We sequenced the two most commonly used inbred mouse strains, DBA/2J and C57BL/6J, across a region of chromosome 1 (171.6 - 174.6 megabases) using two next generation high-throughput sequencing platforms: Applied Biosystems (SOLiD) and Illumina (Genome Analyzer). Using the same templates on both platforms, we compared realignments and single nucleotide polymorphism (SNP) detection with an 80 fold average read depth across platforms and samples. While public datasets currently annotate 4,527 SNPs between the two strains in this interval, thorough high-throughput sequencing identified a total of 11,824 SNPs in the interval, including 7,663 new SNPs. Furthermore, we confirmed 40 missense SNPs and discovered 36 new missense SNPs. CONCLUSION: Comparisons utilizing even two of the best characterized mouse genetic models, DBA/2J and C57BL/6J, indicate that more than half of naturally-occurring SNPs remain cryptic. The magnitude of this problem is compounded when using more divergent or poorly annotated genetic models. This warrants full genomic sequencing of the mouse strains used as genetic models.


Subject(s)
Genomics/methods , Polymorphism, Single Nucleotide , Sequence Analysis, DNA/methods , Animals , Chromosomes, Artificial, Bacterial , Gene Expression Profiling , Genome , Mice , Mice, Inbred C57BL , Mice, Inbred DBA , Sequence Alignment
18.
Biochem Pharmacol ; 75(1): 98-111, 2008 Jan 01.
Article in English | MEDLINE | ID: mdl-17764662

ABSTRACT

Family, adoption and twin data each support substantial heritability for addictions. Most of this heritable influence is not substance-specific. The overlapping genetic vulnerability for developing dependence on a variety of addictive substances suggests large roles for "higher order" pharamacogenomics in addiction molecular genetics. We and others have now completed genome-wide association (GWA) studies of DNAs from individuals with dependence on a variety of addictive substances versus appropriate controls. Recently reported replicated GWA observations identify a number of genes based on comparisons between controls and European-American and African-American polysubstance abusers. Here we review the convergence between these results and data that compares control samples and (a) alcohol-dependent European-Americans, (b) methamphetamine-dependent Asians and (c) nicotine dependent samples from European backgrounds. We also compare these human data to quantitative trait locus (QTL) results from studies of addiction-related phenotypes in mice that focus on alcohol, methamphetamine and barbiturates. These comparisons support a genetic architecture built from largely polygenic contributions of common allelic variants to dependence on a variety of legal and illegal substances. Many of the gene variants identified in this way are likely to alter specification and maintenance of neuronal connections.


Subject(s)
Genome, Human , Substance-Related Disorders/genetics , Black or African American , Animals , Association , Genetic Predisposition to Disease , Humans , Mice , Molecular Biology , Pharmacogenetics , Phenotype , Quantitative Trait Loci , Species Specificity , White People
19.
Brain Res ; 1198: 124-31, 2008 Mar 10.
Article in English | MEDLINE | ID: mdl-18262506

ABSTRACT

Progress towards elucidating the underlying genetic variation for susceptibility to complex central nervous system (CNS) hyperexcitability states has just begun. Genetic mapping analyses suggest that a gene(s) on mid-chromosome 4 has pleiotropic effects on multiple CNS hyperexcitability states in mice, including alcohol and barbiturate withdrawal and convulsions elicited by chemical and audiogenic stimuli. We recently identified Mpdz within this chromosomal region as a gene that influences alcohol and barbiturate withdrawal convulsions. Mpdz encodes the multi-PDZ domain protein (MPDZ). Currently, there is limited information available about the mechanism by which MPDZ influences drug withdrawal and/or other CNS hyperexcitability states, but may involve its interaction with 5-HT2C and/or GABAB receptors. One of the most useful tools we have developed thus far is a congenic strain that possesses a segment of chromosome 4 from the C57BL/6J (donor) mouse strain superimposed on a genetic background that is >99% from the DBA/2J strain. The introduced segment spans the Mpdz gene. Here, we demonstrate that handling-induced convulsions are less severe in congenic vs. background strain mice in response to either a 5-HT2C receptor antagonist (SB242084) or a GABAB receptor agonist (baclofen), but not a GABAA receptor channel blocker (pentylenetetrazol). These data suggest that allelic variation in Mpdz, or a linked gene, influences SB242084- and baclofen-enhanced convulsions. Our results are consistent with the hypothesis that Mpdz's effects on CNS hyperexcitability, including alcohol and barbiturate withdrawal, involve MPDZ interaction with 5-HT2C and/or GABAB receptors. However, additional genes reside within the congenic interval and may also influence CNS hyperexcitability.


Subject(s)
Carrier Proteins/genetics , Epilepsy/genetics , Genetic Predisposition to Disease/genetics , Receptor, Serotonin, 5-HT2C/metabolism , Receptors, GABA-B/metabolism , Seizures/genetics , Animals , Brain/metabolism , Brain/physiopathology , Brain Chemistry/genetics , Carrier Proteins/metabolism , Chromosome Mapping , Chromosomes, Mammalian/genetics , Epilepsy/metabolism , Epilepsy/physiopathology , Female , GABA Agonists/pharmacology , Handling, Psychological , Male , Membrane Proteins , Mice , Mice, Congenic , Mice, Inbred DBA , Mice, Neurologic Mutants , Seizures/metabolism , Seizures/physiopathology , Serotonin Antagonists/pharmacology , Substance Withdrawal Syndrome/genetics , Substance Withdrawal Syndrome/metabolism , Substance Withdrawal Syndrome/physiopathology
20.
Nat Neurosci ; 7(7): 699-700, 2004 Jul.
Article in English | MEDLINE | ID: mdl-15208631

ABSTRACT

Physiological dependence and associated withdrawal episodes can constitute a powerful motivational force that perpetuates drug use and abuse. Using robust behavioral models of drug physiological dependence in mice, positional cloning, and sequence and expression analyses, we identified an addiction-relevant quantitative trait gene, Mpdz. Our findings provide a framework to define the protein interactions and neural circuit by which this gene's product (multiple PDZ domain protein) affects drug dependence, withdrawal and relapse.


Subject(s)
Carrier Proteins/genetics , Genetic Predisposition to Disease , Quantitative Trait Loci/genetics , Seizures/genetics , Substance Withdrawal Syndrome/genetics , Animals , Behavior, Animal , Chromosome Mapping , Cloning, Molecular/methods , Embryo, Mammalian , Ethanol , Gene Expression , Genotype , Membrane Proteins , Mice , Mice, Congenic , Mice, Inbred C57BL , Molecular Sequence Data , Seizures/etiology , Substance Withdrawal Syndrome/complications
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