Evidence of a putative CO2 delivery system to the chromatophore in the photosynthetic amoeba Paulinella.

The photosynthetic amoeba, Paulinella provides a recent (ca. 120 Mya) example of primary plastid endosymbiosis. Given the extensive data demonstrating host lineage-driven endosymbiont integration, we analysed nuclear genome and transcriptome data to investigate mechanisms that may have evolved in Paulinella micropora KR01 (hereinafter, KR01) to maintain photosynthetic function in the novel organelle, the chromatophore. The chromatophore is of α-cyanobacterial provenance and has undergone massive gene loss due to Muller's ratchet, but still retains genes that encode the ancestral α-carboxysome and the shell carbonic anhydrase, two critical components of the biophysical CO2 concentrating mechanism (CCM) in cyanobacteria. We identified KR01 nuclear genes potentially involved in the CCM that arose via duplication and divergence and are upregulated in response to high light and downregulated under elevated CO2. We speculate that these genes may comprise a novel CO2 delivery system (i.e., a biochemical CCM) to promote the turnover of the RuBisCO carboxylation reaction and counteract photorespiration. We posit that KR01 has an inefficient photorespiratory system that cannot fully recycle the C2 product of RuBisCO oxygenation back to the Calvin-Benson cycle. Nonetheless, both these systems appear to be sufficient to allow Paulinella to persist in environments dominated by faster-growing phototrophs.

Prediction of Cr(VI) and As(V) adsorption on goethite using hybrid surface complexation-machine learning model.

This study aimed to develop surface complexation modeling-machine learning (SCM-ML) hybrid model for chromate and arsenate adsorption on goethite. The feasibility of two SCM-ML hybrid modeling approaches was investigated. Firstly, we attempted to utilize ML algorithms and establish the parameter model, to link factors influencing the adsorption amount of oxyanions with optimized surface complexation constants. However, the results revealed the optimized chromate or arsenate surface complexation constants might fall into local extrema, making it unable to establish a reasonable mapping relationship between adsorption conditions and surface complexation constants by ML algorithms. In contrast, species-informed models were successfully obtained, by incorporating the surface species information calculated from the unoptimized SCM with the adsorption condition as input features. Compared with the optimized SCM, the species-informed model could make more accurate predictions on pH edges, isotherms, and kinetic data for various input conditions (for chromate: root mean square error (RMSE) on test set = 5.90 %; for arsenate: RMSE on test set = 4.84 %). Furthermore, the utilization of the interpretable formula based on Local Interpretable Model-Agnostic Explanations (LIME) enabled the species-informed model to provide surface species information like SCM. The species-informed SCM-ML hybrid modeling method proposed in this study has great practicality and application potential, and is expected to become a new paradigm in surface adsorption model.

Speciation and Possible Origins of Organosulfur Compounds in Rice Paddy Soils Affected by Acid Mine Drainage.

Although sulfur cycling in acid mine drainage (AMD)-contaminated rice paddy soils is critical to understanding and mitigating the environmental consequences of AMD, potential sources and transformations of organosulfur compounds in such soils are poorly understood. We used sulfur K-edge X-ray absorption near edge structure (XANES) spectroscopy to quantify organosulfur compounds in paddy soils from five AMD-contaminated sites and one AMD-uncontaminated reference site near the Dabaoshan sulfide mining area in South China. We also determined the sulfur stable isotope compositions of water-soluble sulfate (δ34SWS), adsorbed sulfate (δ34SAS), fulvic acid sulfur (δ34SFAS), and humic acid sulfur (δ34SHAS) in these samples. Organosulfate was the dominant functional group in humic acid sulfur (HAS) in both AMD-contaminated (46%) and AMD-uncontaminated paddy soils (42%). Thiol/organic monosulfide contributed a significantly lower proportion of HAS in AMD-contaminated paddy soils (8%) compared to that in AMD-uncontaminated paddy soils (21%). Within contaminated soils, the concentration of thiol/organic monosulfide was positively correlated with cation exchange capacity (CEC), moisture content (MC), and total Fe (TFe). δ34SFAS ranged from -6.3 to 2.7‰, similar to δ34SWS (-6.9 to 8.9‰), indicating that fulvic acid sulfur (FAS) was mainly derived from biogenic S-bearing organic compounds produced by assimilatory sulfate reduction. δ34SHAS (-11.0 to -1.6‰) were more negative compared to δ34SWS, indicating that dissimilatory sulfate reduction and abiotic sulfurization of organic matter were the main processes in the formation of HAS.

Archean phosphorus recycling facilitated by ultraviolet radiation.

Of the six elements incorporated into the major polymers of life, phosphorus is the least abundant on a global scale [E. Anders, M. Ebihara, Geochim. Cosmochim. Acta 46, 2363-2380 (1982)] and has been described as the "ultimate limiting nutrient" [T. Tyrrell, Nature 400, 525-531 (1999)]. In the modern ocean, the supply of dissolved phosphorus is predominantly sustained by the oxidative remineralization/recycling of organic phosphorus in seawater. However, in the Archean Eon (4 to 2.5 Ga), surface waters were anoxic and reducing. Here, we conducted photochemical experiments to test whether photodegradation of ubiquitous dissolved organic phosphorus could facilitate phosphorus recycling under the simulated Archean conditions. Our results strongly suggest that organic phosphorus compounds, which were produced by marine biota (e.g., adenosine monophosphate and phosphatidylserine) or delivered by meteorites (e.g., methyl phosphonate) can undergo rapid photodegradation and release inorganic phosphate into solution under anoxic conditions. Our experimental results and theoretical calculations indicate that photodegradation of organic phosphorus could have been a significant source of bioavailable phosphorus in the early ocean and would have fueled primary production during the Archean eon.

A New Electron Shuttling Pathway Mediated by Lipophilic Phenoxazine via the Interaction with Periplasmic and Inner Membrane Proteins of Shewanella oneidensis MR-1.

Although it has been established that electron mediators substantially promote extracellular electron transfer (EET), electron shuttling pathways are not fully understood. Here, a new electron shuttling pathway was found in the EET process by Shewanella oneidensis MR-1 with resazurin, a lipophilic electron mediator. With resazurin, the genes encoding outer-membrane cytochromes (mtrCBA and omcA) were downregulated. Although cytochrome deletion substantially reduced biocurrent generation to 1-12% of that of wild-type (WT) cells, the presence of resazurin restored biocurrent generation to 168 µA·cm-2 (ΔmtrA/omcA/mtrC), nearly equivalent to that of WT cells (194 µA·cm-2), indicating that resazurin-mediated electron transfer was not dependent on the Mtr pathway. Biocurrent generation by resazurin was much lower in ΔcymA and ΔmtrA/omcA/mtrC/fccA/cctA mutants (4 and 6 µA·cm-2) than in WT cells, indicating a key role of FccA, CctA, and CymA in this process. The effectiveness of resazurin in EET of Mtr cytochrome mutants is also supported by cyclic voltammetry, resazurin reduction kinetics, and in situ c-type cytochrome spectroscopy results. The findings demonstrated that low molecular weight, lipophilic electron acceptors, such as phenoxazine and phenazine, may facilitate electron transfer directly from periplasmic and inner membrane proteins, thus providing new insight into the roles of exogenous electron mediators in electron shuttling in natural and engineered biogeochemical systems.

Grass Shrimp (Palaemonetes pugio) as a Trophic Link for Methylmercury Accumulation in Urban Salt Marshes.

Grass shrimp (Palaemonetes pugio) represent a potential link in the transfer of methylmercury (MeHg) from salt marsh sediments to transient young-of-the-year (YOY) fish. Across six salt marshes subject to varying degrees of Hg contamination, MeHg concentration in grass shrimp was significantly correlated with MeHg in sediment (p < 0.05, R2 = 0.81). Bioenergetic models show that grass shrimp alone account for 12-90% of MeHg observed in YOY striped bass and 6-22% of MeHg in YOY summer flounder. Direct accumulation of MeHg from grass shrimp to YOY fish increased with MeHg levels in grass shrimp and sediment. However, in the most contaminated salt marshes with the highest levels of MeHg in grass shrimp and sediment, indirect accumulation of MeHg from grass shrimp by YOY summer flounder, whose diet is dominated by benthic forage fish (mummichog), is predicted to plateau because higher concentrations of MeHg in grass shrimp are offset by a lower proportion of grass shrimp in the mummichog diet. Our results demonstrate that grass shrimp are an important trophic link in the bioaccumulation of MeHg in salt marsh food webs and that MeHg accumulation in YOY fish varies with both the concentration of MeHg in salt marsh sediments and benthic food web structure.

Reduction of acid mine drainage by passivation of pyrite surfaces: A review.

Acid mine drainage (AMD), a source of considerable environmental pollution worldwide, has prompted the development of many strategies to alleviate its effects. Unfortunately, the methods available for remedial treatment of AMD and the damage it cause are generally costly, labor-intensive, and time-consuming. Furthermore, such treatments may result in secondary pollution. Alternatively, treating the AMD problem at its source through pyrite surface passivation has become an important topic for research because it has the potential to reduce or prevent the generation of AMD and associated pollution. This review summarizes various pyrite anti-corrosion technologies, including the formation of various passivating coatings (inorganic, organic and organosilane) and carrier-microencapsulation. Several effective long-term passivators are identified, although many of them currently have important deficiencies that limit their practical application. Combining the mechanisms of existing passivation agents or new artificial materials, while considering environmental conditions, costs, and long-term passivation performance, is a feasible direction for future research.

Comparative physiological and transcriptomic analyses illuminate common mechanisms by which silicon alleviates cadmium and arsenic toxicity in rice seedlings.

The inessential heavy metal/loids cadmium (Cd) and arsenic (As), which often co-occur in polluted paddy soils, are toxic to rice. Silicon (Si) treatment is known to reduce Cd and As toxicity in rice plants. To better understand the shared mechanisms by which Si alleviates Cd and As stress, rice seedlings were hydroponically exposed to Cd or As, then treated with Si. The addition of Si significantly ameliorated the inhibitory effects of Cd and As on rice seedling growth. Si supplementation decreased Cd and As translocation from roots to shoots, and significantly reduced Cd- and As-induced reactive oxygen species generation in rice seedlings. Transcriptomics analyses were conducted to elucidate molecular mechanisms underlying the Si-mediated response to Cd or As stress in rice. The expression patterns of the differentially expressed genes in Cd- or As-stressed rice roots with and without Si application were compared. The transcriptomes of the Cd- and As-stressed rice roots were similarly and profoundly reshaped by Si application, suggesting that Si may play a fundamental, active role in plant defense against heavy metal/loid stresses by modulating whole genome expression. We also identified two novel genes, Os01g0524500 and Os06g0514800, encoding a myeloblastosis (MYB) transcription factor and a thionin, respectively, which may be candidate targets for Si to alleviate Cd and As stress in rice, as well as for the generation of Cd- and/or As-resistant plants. This study provides valuable resources for further clarification of the shared molecular mechanisms underlying the Si-mediated alleviation of Cd and As toxicity in rice.

Mass-Independent Fractionation of Mercury Isotopes during Photoreduction of Soot Particle Bound Hg(II).

Soot and mercury (Hg) are two notorious air pollutants, and the fate and transport of Hg may be affected by soot at various scales in the environment as soot may be both a carrier and a reactant for active Hg species. This study was designed to quantify photoreduction of Hg(II) in the presence of soot and the associated Hg isotope fractionation under both atmospheric aerosol and aqueous conditions (water-saturated). Photoreduction experiments were conducted with diesel soot particulate matter under controlled temperature and relative humidity (RH) conditions using a flow-through semibatch reactor system. Mass-dependent fractionation resulted in the enrichment of heavier Hg isotopes in the remaining Hg(II) with enrichment factors (ε202Hg) of 1.48 ± 0.02‰ (±2 standard deviation) to 1.75 ± 0.05‰ for aerosol-phase reactions (RH 28-68%) and from 1.26 ± 0.11 to 1.50 ± 0.04‰ for aqueous-phase reactions. Positive odd mass-independent fractionation (MIF) was observed in aqueous-phase reactions, resulting in Δ199Hg values for reactant Hg(II) as high as 5.29‰, but negative odd-MIF occurred in aerosol-phase reactions, in which Δ199Hg values of reactant Hg(II) varied from -1.02 to 0‰. The average ratio of Δ199Hg/Δ201Hg (1.1) indicated that under all conditions, MIF was dominated by magnetic isotope effects during photoreduction of Hg(II). Increasing RH resulted in higher reduction rates but lower extents of negative MIF in the aerosol-phase experiments, suggesting that the reduction of soot particle-bound Hg(II) was responsible for the observed negative odd-MIF. Our results suggest that mass-independent Hg isotope fractionation during Hg(II) photoreduction varies with soot aerosol water content and that Hg-stable isotope ratios may be used to understand the transformational histories of aerosol-bound Hg(II) in the environment.

Bluefin tuna reveal global patterns of mercury pollution and bioavailability in the world's oceans.

Bluefin tuna (BFT), highly prized among consumers, accumulate high levels of mercury (Hg) as neurotoxic methylmercury (MeHg). However, how Hg bioaccumulation varies among globally distributed BFT populations is not understood. Here, we show mercury accumulation rates (MARs) in BFT are highest in the Mediterranean Sea and decrease as North Pacific Ocean > Indian Ocean > North Atlantic Ocean. Moreover, MARs increase in proportion to the concentrations of MeHg in regional seawater and zooplankton, linking MeHg accumulation in BFT to MeHg bioavailability at the base of each subbasin's food web. Observed global patterns correspond to levels of Hg in each ocean subbasin; the Mediterranean, North Pacific, and Indian Oceans are subject to geogenic enrichment and anthropogenic contamination, while the North Atlantic Ocean is less so. MAR in BFT as a global pollution index reflects natural and human sources and global thermohaline circulation.

Improved extraction of acid-insoluble monosulfide minerals by stannous chloride reduction and its application to the separation of mono- and disulfide minerals in the presence of ferric iron.

Metal sulfides, which are important indicators of sulfur cycling, are usually divided into two categories according to sulfur chemical valence: (1) monosulfides (S2-) and (2) disulfides (S22-). The two sulfur species are separated and quantified by a sequential-extraction method. Specifically, monosulfides are extracted as acid-volatile sulfide (AVS) using 6 M HCl prior to the extraction of disulfides using acidic CrCl2, which is defined as chromium-reducible sulfur (CRS). However, the conventional AVS procedure does not result in the quantitative extraction of S2- from the acid-insoluble metal monosulfide, copper sulfide (CuS). Consequently, residual sulfur in CuS (CuS-S) may be extracted as CRS resulting in the inaccurate separation of these two sulfur species. In this study, we used stannous chloride (SnCl2) to improve CuS-S recovery in the AVS procedure and permit the separate extraction of sulfur from CuS and pyrite (FeS2), the most abundant disulfide in nature. Our results show that the addition of SnCl2 increased the recovery of CuS-S as AVS from less than 36% to as high as 92% in the absence of pyrite and Fe3+ and 89% in the presence of pyrite and Fe3+. In addition, based on the observed correlation between the concentration of SnCl2 and the dissolution of FeS2, we identified the appropriate concentration of SnCl2 needed to avoid the dissolution of FeS2 in the AVS procedure. SnCl2 also minimized the oxidation of CuS-S by Fe3+ released from ferric minerals during the extraction of AVS. Based on the results of a series of sequential-extraction experiments, we show that an amendment of SnCl2 in the AVS procedure followed by CRS permits the quantitative separation of CuS-S and FeS2-S while also preventing interference by Fe3+. Our method will find application in research concerned with the fate of metals and the biogeochemistry of sulfur in the environment.

Microbial reduction of As(V)-loaded Schwertmannite by Desulfosporosinus meridiei.

Arsenic-rich schwertmannite may cause arsenic (As) release during phase transition. In this study, microbial sulfidogenesis on As(V)-loaded schwertmannite (As-Sch) and associated As mobility at different SO42- concentrations were investigated under anaerobic conditions by Desulfosporosinus meridiei (D. meridiei). For biotic treatments, the more SO42- was added, the more Fe3+ was reduced to Fe2+, and the more As(V) was released during the reductive dissolution of As-Sch. The reduction of As(V) to As(III) by D. meridiei resulted in a higher concentration, toxicity, solubility and mobility of As than the corresponding abiotic treatments. However, compared with the abiotic treatments, a variety of new minerals (such as mackinawite, vivianite, sulfur, As2S3, and parasymplesite) were generated in the biotic treatments, and the As concentration in aqueous solution was less than 1 µM at the end of the incubation period regardless of the presence of SO42-. The results of continuous extraction of different species of As from secondary minerals showed that the effect of microorganisms decreased As content of amorphous iron oxide-bound phase, while increasing that bound on the surface of iron oxide surface-bound phase, thus increasing As fluidity. Our findings indicated that under anaerobic conditions, D. meridiei sulfidogenesis can trigger significant As mobilization in the early stage and remove As from the aqueous solutions when new minerals are formed at a later stage.

Production of methylmercury by methanogens in mercury contaminated estuarine sediments.

Anaerobic bacteria are known to produce neurotoxic methylmercury [MeHg] when elemental mercury [Hg(0)] is provided as the sole mercury source. In this study, we examined the formation of MeHg in anaerobic incubations of sediment collected from the San Jacinto River estuary (Texas, USA) amended with aqueous Hg(0) to investigate the microbial communities involved in the conversion of Hg(0) to MeHg. The results show that the addition of the methanogen inhibitor 2-bromoethanesulfonate (BES) significantly decreased MeHg production. The mercury methylation gene, hgcA, was detected in these sediments using archaeal specific primers, and 16S rRNA sequencing showed that a member of the Methanosarcinaceae family of methanogens was active. These results suggest that methanogenic archaea play an underappreciated role in the production of MeHg in estuarine sediments contaminated with Hg(0).

Extracellular Electron Shuttling Mediated by Soluble c-Type Cytochromes Produced by Shewanella oneidensis MR-1.

How metal-reducing bacteria transfer electrons during dissimilatory energy generation under electron acceptor-limited conditions is poorly understood. Here, we incubated the iron and manganese-reducing bacterium Shewanella oneidensis MR-1 without electron acceptors. Removal of soluble extracellular organic compounds (EOCs) dramatically retarded transfer of electrons to an experimental electron acceptor, Cr(VI), by MR-1. However, the return of either high MW (>3000 Da) or low MW (<3000 Da) soluble EOCs produced by MR-1 to washed cells restored Cr(VI) reduction though Cr(VI) reduction was fastest when both size fractions were added together. Spectral and electrochemical characterization of EOCs indicated the presence of flavins and c-type cytochromes (c-Cyts). A model of the kinetics of individual elementary reactions between cells, flavins, released c-Cyts, and Cr(VI), including the direct reduction of flavins, released c-Cyts, and Cr(VI) by cells and the indirect reduction of Cr(VI) by reduced forms of flavins and released c-Cyts, was developed. Model results suggest that released c-Cyts could act as electron mediators to accelerate electron transfer from cells to Cr(VI), and the relative contribution of this pathway was higher than that mediated by flavins. Hence, extracellular c-Cyts produced by MR-1 likely play a role in extracellular electron transfer under electron acceptor-limited conditions. These findings provide new insights into extracellular electron shuttling and the metabolic strategy of metal-reducing bacteria under electron acceptor-limited conditions.

Mercury Isotope Fractionation during the Photochemical Reduction of Hg(II) Coordinated with Organic Ligands.

The photochemical reduction of Hg(II) is an important pathway in the environmental Hg cycle because it competes with Hg methylation and potentially limits the formation of bioaccumulative methylmercury. Hg stable isotope systematics have proven to be an effective tool for investigating the transport, transformation, and bioaccumulation of Hg. The dominant cause of mass independent isotope fractionation (MIF) of Hg in nature is the photochemical reduction of various species of Hg(II). However, it is difficult to fully interpret Hg stable isotope signatures due to the lack of mechanistic information about which Hg compounds are susceptible to MIF and why. This study investigates Hg isotope fractionation during the photochemical reduction of Hg(II) complexed to organic ligands, which are representative of the available binding sites in natural dissolved organic matter. The photochemical reduction of Hg(II) in the presence of cysteine resulted in both negative and positive MIF in residual Hg(II), where the sign depended on pH and dissolved oxygen level. In the presence of serine, either nuclear volume or magnetic isotope effects were observed depending on the wavelength of light and the extent of Hg(II) complexation by serine. In the presence of ethylenediamine, MIF was negative. Our Hg stable isotope results suggest that MDF and MIF are induced at different steps in the overall photochemical reduction reaction and that MIF does not depend on the rate-determining step but instead depends on photophysical aspects of the reaction such as intersystem crossing and hyperfine coupling. The behavior of Hg isotopes reported here will allow for a better understanding of the underlying reaction mechanisms controlling the Hg isotope signatures recorded in natural samples.

Spatiotemporal Variations in Dissolved Elemental Mercury in the River-Dominated and Monsoon-Influenced East China Sea: Drivers, Budgets, and Implications.

Distinct spatiotemporal distributions of sea surface dissolved elemental mercury (DEM) and its air-sea exchange flux were observed in the river-dominated and monsoon-influenced East China Sea (ECS). Spatially, DEM concentrations were higher in the nearshore Changjiang diluted water (90 ± 20 to 260 ± 40 fM) than in the offshore Kuroshio water (60 ± 10 to 160 ± 40 fM) and correlated with salinity and total Hg concentrations, suggesting that the total Hg discharged from the Changjiang river is a controlling factor. In summer, monsoon-driven coastal upwelling formed a transient nearshore water mass with very elevated DEM concentrations (290 ± 20 to 320 ± 70 fM). Seasonally, DEM concentrations in all water masses were the highest in summer (120 ± 30 to 320 ± 70 fM). Estimated rate coefficients for DEM production varied seasonally and strongly correlated with sea surface temperature (SST). Hg0 evasion fluxes also peaked in summer (670 ± 380 pmol m-2 day-1), while in winter, DEM was close to equilibrium with gaseous elemental mercury in the atmosphere. Based on the air-sea Hg fluxes for all four seasons from this study and regional atmospheric deposition fluxes from others, we conclude that the ECS is a net sink of Hg annually, but it is a source of Hg to the atmosphere in summer. Moreover, the contribution of the ECS to Hg evasion may increase as a result of flood-associated high Changjiang discharge and rising SST.

Archaeal nitrification is constrained by copper complexation with organic matter in municipal wastewater treatment plants.

Consistent with the observation that ammonia-oxidizing bacteria (AOB) outnumber ammonia-oxidizing archaea (AOA) in many eutrophic ecosystems globally, AOB typically dominate activated sludge aeration basins from municipal wastewater treatment plants (WWTPs). In this study, we demonstrate that the growth of AOA strains inoculated into sterile-filtered wastewater was inhibited significantly, in contrast to uninhibited growth of a reference AOB strain. In order to identify possible mechanisms underlying AOA-specific inhibition, we show that complex mixtures of organic compounds, such as yeast extract, were highly inhibitory to all AOA strains but not to the AOB strain. By testing individual organic compounds, we reveal strong inhibitory effects of organic compounds with high metal complexation potentials implying that the inhibitory mechanism for AOA can be explained by the reduced bioavailability of an essential metal. Our results further demonstrate that the inhibitory effect on AOA can be alleviated by copper supplementation, which we observed for pure AOA cultures in a defined medium and for AOA inoculated into nitrifying sludge. Our study offers a novel mechanistic explanation for the relatively low abundance of AOA in most WWTPs and provides a basis for modulating the composition of nitrifying communities in both engineered systems and naturally occurring environments.

Variation in the mercury concentration and stable isotope composition of atmospheric total suspended particles in Beijing, China.

We investigated the effect of the temporary ban of local industrial activities during the Asia-Pacific Economic Cooperation (APEC) summit (4th-14th Nov 2014) in Beijing, China on total suspended particulate mercury (HgTSP) concentrations and isotope compositions. We measured Hg concentrations and isotope ratios in 33 TSP samples from central Beijing, including 21 samples collected from Jun 2012 to Apr 2014, and 12 samples collected from 14th Oct-19th Nov 2014. Volumetric concentrations of both TSP and HgTSP during the APEC summit were a factor of 2 lower than during the pre-APEC period, indicating substantial reductions in total particulate matter and HgTSP as a result of emissions controls. However, mass-normalized concentrations and mercury isotope ratios of HgTSP did not vary significantly between samples collected before, during, or after the APEC summit. These results show that local emissions are important sources of particle bound mercury (PBM) in Beijing and that their control can be used to immediately lower the volumetric concentration of HgTSP. They also indicate that a similarly complex mixture of sources contributed to PBM in Beijing before and during emissions controls were put in place and that PBM concentrations in Beijing are primarily controlled by emissions and secondarily by photoreduction.

Reductive dissolution of jarosite by a sulfate reducing bacterial community: Secondary mineralization and microflora development.

Jarosite is an iron-hydroxysulfate mineral commonly found in acid mine drainage (AMD). Given its strong adsorption capacity and its ability to co-precipitation with heavy metals, jarosite is considered a potent scavenger of contaminants in AMD-impacted environments. Sulfate-reducing bacteria (SRB) play an important role in the reductive dissolution of jarosite; however, the mechanism involved has yet to be elucidated. In this study, an indigenous SRB community enriched from the Dabaoshan mine area (Guangdong, China) was employed to explore the mechanism of the microbial reduction of jarosite. Different cultures, with or without dissolved sulfate and the physical separation of jarosite from bacteria by dialysis bags, were examined. Results indicate that the reduction of jarosite by SRB occurred via an indirect mechanism. In systems with dissolved sulfate, lactate was incompletely oxidized to acetate coupled with the reduction of SO42- to S2-, which subsequently reduced the Fe3+ in jarosite, forming secondary minerals including vivianite, mackinawite and pyrite. In systems without dissolved sulfate, jarosite dissolution occurred prior to reduction, and similar secondary minerals formed as well. Extracellular polymeric substances secreted by SRB appeared to facilitate the release of sulfate from jarosite. Structural sulfate in the solid phase of jarosite may not be available for SRB respiration. Although direct contact between SRB and jarosite is not necessary for mineral reduction, wrapping jarosite into dialysis bags suppressed the reduction to a certain extent. Microbial community composition differed in direct contact treatments and physical separation treatments. Physical separation of the SRB community from jarosite mineral supported the growth of Citrobacter, while Desulfosporosinus dominated in direct contact treatments.

Size Scaling of Contaminant Trace Metal Accumulation in the Infaunal Marine Clam Amiantis umbonella.

Size scaling of the accumulation of four trace metals was examined in the infaunal clam Amiantis umbonella in Kuwait Bay. In clams of varying shell length (2.5-5 cm), soft tissue growth in A. umbonella from a contaminated site was inhibited compared with clams from a less contaminated reference site. Body burdens of all four metals were positively correlated with clam soft tissue wet weight, but for Cd, Cu, and Pb, correlations were stronger in clams from the contaminated site (r2 = 0.6-0.9, p < 0.001) than the reference site (r2 = 0.2-0.3, p < 0.002). Scaling factors for the accumulation of Cd, Cu, and Pb in the soft tissues of A. umbonella from both sites were not significantly different than 1, indicating that clams accumulated these metals in proportion to growth with little regulation. The scaling factor of Hg in clams from the contaminated site also was 1 but was 0.5 and 2.4 for high and low Hg accumulating subpopulations of clams from the reference site, respectively. The greater retention of Hg with respect to growth in clams from the reference site than from the contaminated site requires further investigation to determine differences in Hg bioavailability at the two sites and the form of Hg these clams accumulate.