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Introducción. Los datos de frecuencia de los adenovirus entéricos, sapovirus y astrovirus en casos de gastroenteritis aguda esporádica en Argentina son escasos. Métodos. Diseño descriptivo sobre una selección de muestras de heces de menores de 5 años con diarrea remitidas durante el período 2010-2021, con resultado previo negativo para rotavirus y norovirus. Se estudió la presencia de adenovirus entéricos, sapovirus y astrovirus por métodos moleculares, con posterior genotipificación de las muestras positivas. Resultados. De 574 muestras seleccionadas, en 226 (39,4 %) se identificó al menos uno de los virus estudiados. En particular, se detectaron adenovirus, sapovirus y astrovirus en el 30,7 %, el 5,6 % y el 3,1 %, respectivamente. El adenovirus 41, los sapovirus GI.1 y GI.2, y el astrovirus 1 fueron los más frecuentemente detectados. Se identificaron dos muestras con astrovirus no clásicos. Conclusiones. A pesar de ser menos frecuentes, estos enteropatógenos son responsables de un número considerable de episodios de diarrea esporádica. Por lo tanto, su estudio y vigilancia contribuye significativamente a reducir la brecha de casos no diagnosticados.
Introduction. Data on the frequency of enteric adenoviruses, sapoviruses, and astroviruses in cases of sporadic acute gastroenteritis in Argentina are scarce. Methods. Descriptive design of a selection of fecal samples of children with diarrhea younger than 5 years referred between 2010 and 2021, with a previous negative result for rotavirus and norovirus. The presence of enteric adenovirus, sapovirus, and astrovirus was tested by molecular methods, with subsequent genotyping of positive samples. Results. At least 1 of the tested viruses was detected in 226 (39.4%) of the 574 selected samples. Specifically, adenovirus, sapovirus, and astrovirus were detected in 30.7%, 5.6%, and 3.1% of the samples, respectively. The most frequent viruses detected were adenovirus 41, sapoviruses GI.1 and GI.2, and astrovirus 1. Non-classic astroviruses were detected in 2 samples. Conclusions. Despite being less frequent, these enteropathogens are responsible for a large number of sporadic diarrhea events. Therefore, their study and surveillance contribute significantly to reduce the gap of undiagnosed cases.
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Humanos , Lactente , Pré-Escolar , Diarreia/epidemiologia , Diarreia/virologia , Gastroenterite/epidemiologia , Gastroenterite/virologia , Argentina/epidemiologia , Astroviridae/isolamento & purificação , Astroviridae/genética , Sapovirus/isolamento & purificação , Sapovirus/genética , Fezes/virologia , GenótipoRESUMO
Introduction. Data on the frequency of enteric adenoviruses, sapoviruses, and astroviruses in cases of sporadic acute gastroenteritis in Argentina are scarce. Methods. Descriptive design of a selection of fecal samples of children with diarrhea younger than 5 years referred between 2010 and 2021, with a previous negative result for rotavirus and norovirus. The presence of enteric adenovirus, sapovirus, and astrovirus was tested by molecular methods, with subsequent genotyping of positive samples. Results. At least 1 of the tested viruses was detected in 226 (39.4%) of the 574 selected samples. Specifically, adenovirus, sapovirus, and astrovirus were detected in 30.7%, 5.6%, and 3.1% of the samples, respectively. The most frequent viruses detected were adenovirus 41, sapoviruses GI.1 and GI.2, and astrovirus 1. Non-classic astroviruses were detected in 2 samples. Conclusions. Despite being less frequent, these enteropathogens are responsible for a large number of sporadic diarrhea events. Therefore, their study and surveillance contribute significantly to reduce the gap of undiagnosed cases.
Introducción. Los datos de frecuencia de los adenovirus entéricos, sapovirus y astrovirus en casos de gastroenteritis aguda esporádica en Argentina son escasos. Métodos. Diseño descriptivo sobre una selección de muestras de heces de menores de 5 años con diarrea remitidas durante el período 2010-2021, con resultado previo negativo para rotavirus y norovirus. Se estudió la presencia de adenovirus entéricos, sapovirus y astrovirus por métodos moleculares, con posterior genotipificación de las muestras positivas. Resultados. De 574 muestras seleccionadas, en 226 (39,4 %) se identificó al menos uno de los virus estudiados. En particular, se detectaron adenovirus, sapovirus y astrovirus en el 30,7 %, el 5,6 % y el 3,1 %, respectivamente. El adenovirus 41, los sapovirus GI.1 y GI.2, y el astrovirus 1 fueron los más frecuentemente detectados. Se identificaron dos muestras con astrovirus no clásicos. Conclusiones. A pesar de ser menos frecuentes, estos enteropatógenos son responsables de un número considerable de episodios de diarrea esporádica. Por lo tanto, su estudio y vigilancia contribuye significativamente a reducir la brecha de casos no diagnosticados.
Assuntos
Diarreia , Gastroenterite , Humanos , Argentina/epidemiologia , Gastroenterite/virologia , Gastroenterite/epidemiologia , Lactente , Pré-Escolar , Diarreia/virologia , Diarreia/epidemiologia , Masculino , Feminino , Sapovirus/genética , Sapovirus/isolamento & purificação , Fezes/virologia , Genótipo , Recém-Nascido , Astroviridae/genética , Astroviridae/isolamento & purificaçãoRESUMO
Resumen Las infecciones por mordeduras de perros y gatos presentan una etiología bacteriana mixta con microorganismos aerobios y anaerobios que provienen de la cavidad oral del agresor y, en menor medida, de la piel del agredido y el medio ambiente. Con mayor frecuencia se aíslan Pasteurella multocida, Pasteurella canis, Streptococcus spp., Staphylococcus spp., Corynebacterium spp., Capnocytophaga canimorsus y anaerobios. Si bien las infecciones por mordeduras de animales no son infrecuentes, algunos de los microorganismos implicados son excepcionales. Neisseria weaveri forma parte de la microbiota orofaríngea de perros y gatos; sin embargo, los casos comunicados debidos a mordeduras son escasos.
Abstract Infections caused by dog and cat bites have a mixed bacterial etiology with aerobic and anaerobic microorganisms that come from the mouth of the offender and, to a lesser extent, from the skin of the victim and the environment. Pasteurella multocida, Pasteurella canis, Streptococcus spp., Staphylococcus spp., Corynebacterium spp., Capnocytophaga canimorsus and anaerobes can be frequently isolated. Although animal bite infections are not uncommon, some of the microorganisms involved are rare. Neisseria weaveri is part of the oropharyngeal microbiota of dogs and cats; however, reported cases due to bites are rare.
Resumo As infecções causadas por mordeduras de cães e gatos têm etiologia bacteriana mista com microrganismos aeróbicos e anaeróbicos que provêm da cavidade bucal do agressor e, em menor grau, da pele da vítima e do meio ambiente. Pasteurella multocida, Pasteurella canis, Streptococcus spp., Staphylococcus spp., Corynebacterium spp., Capnocytophaga canimorsus e aneróbios podem ser isoladas mais frequentemente. Embora as infecções por mordeduras de animais não sejam incomuns, alguns dos microorganismos envolvidos são raros. A Neisseria weaveri faz parte da microbiota orofaríngea de cães e gatos, porém são escassos os casos relatados como consequência de mordeduras.
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One of the challenges associated with introducing a vaccine is monitoring its impact through clinical and molecular surveillance. The aims of this study were to analyze the genetic diversity of rotavirus A in Argentina between 2019 and 2022 and to assess the phylogenetic and phylodynamic features of the unusual G6 strains detected. A significant decline in the Wa-like genogroup strains was observed, and G6 strains were detected for the first time in Argentina, in association with P[8] and P[9]. Spatiotemporal analysis showed that the G6-lineage I strains detected recently in Argentina and Brazil might have emerged from European strains. This study provides recent evidence of the genetic diversity of rotaviruses in isolated cases. It is considered important to support continuous surveillance of rotavirus in the post-vaccine scenario, mainly to evaluate potential changes that may occur after the COVID-19 pandemic.
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COVID-19 , Rotavirus , Humanos , Rotavirus/genética , Argentina/epidemiologia , Pandemias , Filogenia , COVID-19/epidemiologia , Variação GenéticaRESUMO
BACKGROUND: Noroviruses (NVs) are recognized as the leading cause of sporadic and epidemic acute gastroenteritis worldwide, in all age groups. Although there is increasing knowledge that NVs are responsible for many acute gastroenteritis outbreaks in Argentina, studies to estimate prevalence in sporadic cases are scarce. METHODS: A descriptive, observational and cross-sectional study was conducted with children under 5 years with acute gastroenteritis attending the outpatient department at the "Ricardo Gutiérrez" Children's Hospital (RGCH) in Buenos Aires City between June 2017 and June 2021. Sociodemographic, clinical and epidemiologic data were recorded. Stool samples were tested and genotyped for norovirus. Association between norovirus detection and demographic and clinical variables was assessed. RESULTS: A total of 350 children with acute diarrhea were included, of which stool samples were collected for 332 (94.9%). Norovirus was detected in 81 cases (24.4%). Vomiting and moderate/severe diarrhea were more frequent in norovirus-positive than norovirus-negative children. However, the presence of watery diarrhea and a history of rotavirus vaccination were significantly associated with norovirus etiology. GII and GII.4 were the most frequently detected genogroup and genotype, respectively. CONCLUSIONS: NVs were detected with high frequency, mostly in children between 6 months and 2 years old, reinforcing the hypothesis of a newly updated scenario of norovirus predominance over rotavirus. Watery diarrhea, complete vaccination against rotavirus and vomiting are 3 key parameters that should raise suspicion of possible norovirus gastroenteritis. Continuous and active norovirus surveillance in this age group is important because children represent a priority group for norovirus vaccine design and development.
Assuntos
Infecções por Caliciviridae , Gastroenterite , Norovirus , Rotavirus , Humanos , Criança , Lactente , Pré-Escolar , Norovirus/genética , Argentina/epidemiologia , Estudos Transversais , Infecções por Caliciviridae/epidemiologia , Fezes , Gastroenterite/epidemiologia , Diarreia/epidemiologia , Genótipo , Prevalência , Hospitais Pediátricos , FilogeniaRESUMO
INTRODUCTION: Rotavirus (RV) is the most common cause of childhood diarrhea. Argentina introduced RV vaccination in the National Immunization Program in January 2015. This study evaluates the impact of RV vaccine implementation on the burden of acute diarrheal disease (ADD) and RV positive cases, and hospitalizations among children in Argentina. METHODS: A counterfactual time-series analysis was performed. Data on ADD (2013-2018) and RV diarrhea (2012-2018) cases in children aged < 5 years were collected from the National Healthcare Surveillance System (clinical and laboratory data). Data on hospital discharges following ADD and RV diarrhea (2011-2017) were retrieved from the Health Statistics and Information Office. All data were classified by the age groups < 1 year, < 2 years, 2-5 years. Vaccine impact was defined as the difference between the predicted time trend (simulated using 2012-2014 data) and the actual post-vaccination data (2015-2018). RESULTS: A significant reduction of 22.1% of notified ADD cases and 15.4% of hospital discharges following ADD among children < 2 years was observed in the 3 years after RV vaccine implementation. Data also showed a significant decline of 54.0% and 59.4% of notified RV cases in children < 2 and < 1 years, respectively, and a reduction of 39.3% and 40.8% in RV hospital discharges for the same age groups. CONCLUSION: This study shows a significant reduction in notified ADD cases and RV cases and hospital discharges following ADD and RV cases in children < 2 years after RV vaccine introduction in Argentina in 2015.
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Rotavirus is one of the leading causes of diarrhea in children. In 2018, G8P[8], an unusual association of genotypes, was detected with moderate frequency in symptomatic children in Argen-tina, unlike a previous sporadic identification in 2016. The aim of this study was to analyze the dissemination pattern of the G8P[8]-lineage IV strains detected in Argentina. Nucleotide sequences of the VP7 gene of Argentine G8P[8] strains (2016, 2018 and 2019) were studied by discrete phylodynamic analyses, together with other worldwide relevant G8-lineage IV strains. Bayes Factor (BF) was used to assess the strength of the epidemiological association between countries. Phylodynamic analyses determined an evolutionary rate of 3.7 × 10-3 (HDP95%: 1.4 × 10-3-8.2 × 10-3) substitutions/site/year. Likewise, the most recent common ancestor was 32.2 years old, dating back to 1986 (HDP95% = 1984-1988). The spatiotemporal dynamics analysis revealed South Korea as being the country of origin of the Argentine strains (posterior probability of the ancestral state: 0.8471), which was also evidenced by a significant rate of diffusion from South Korea to Argentina (BF: 55.1). The detection of G8 in South America in 2016-2017 was not related to the cases detected in 2018-2019, revealing a new G8 introduction to the region and supporting a transpacific dissemination.
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Infecções por Rotavirus , Rotavirus , Criança , Humanos , Adulto , Rotavirus/genética , Infecções por Rotavirus/epidemiologia , Filogeografia , Argentina/epidemiologia , Teorema de Bayes , Filogenia , GenótipoRESUMO
Alterations of myeloid cell populations have been reported in patients with tuberculosis (TB). In this work, we studied the relationship between myeloid-derived suppressor cells (MDSC) and monocytes subsets with the immunological responsiveness of TB patients. Individuals with active TB were classified as low responders (LR-TB) or high responders (HR-TB) according to their T cell responses against a cell lysate of Mycobacterium tuberculosis (Mtb-Ag). Thus, LR-TB, individuals with severe disease, display a weaker immune response to Mtb compare to HR-TB, subjects with strong immunity against the bacteria. We observed that LR-TB presented higher percentages of CD16 positive monocytes as compared to HR-TB and healthy donors. Moreover, monocyte-like (M-MDSC) and polymorphonuclear-like (PMN-MDSC) MDSC were increased in patients and the proportion of M-MDSC inversely correlated with IFN-γ levels released after Mtb-Ag stimulation in HR-TB. We also found that LR-TB displayed the highest percentages of circulating M-MDSC. These results demonstrate that CD16 positive monocytes and M-MDSC frequencies could be used as another immunological classification parameter. Interestingly, in LR-TB, frequencies of CD16 positive monocytes and M-MDSC were restored after only three weeks of anti-TB treatment. Together, our findings show a link between the immunological status of TB patients and the levels of different circulating myeloid cell populations.
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Mycobacterium tuberculosis , Células Supressoras Mieloides , Tuberculose , Humanos , Monócitos , Células MieloidesRESUMO
Norovirus is a major cause of acute gastroenteritis worldwide. Over 30 different genotypes, mostly from genogroup I (GI) and II (GII), have been shown to infect humans. Despite three decades of genome sequencing, our understanding of the role of genomic diversification across continents and time is incomplete. To close the spatiotemporal gap of genomic information of human noroviruses, we conducted a large-scale genome-wide analyses that included the nearly full-length sequencing of 281 archival viruses circulating since the 1970s in over 10 countries from four continents, with a major emphasis on norovirus genotypes that are currently underrepresented in public genome databases. We provided new genome information for 24 distinct genotypes, including the oldest genome information from 12 norovirus genotypes. Analyses of this new genomic information, together with those publicly available, showed that (i) noroviruses evolve at similar rates across genomic regions and genotypes; (ii) emerging viruses evolved from transiently-circulating intermediate viruses; (iii) diversifying selection on the VP1 protein was recorded in genotypes with multiple variants; (iv) non-structural proteins showed a similar branching on their phylogenetic trees; and (v) contrary to the current understanding, there are restrictions on the ability to recombine different genomic regions, which results in co-circulating populations of viruses evolving independently in human communities. This study provides a comprehensive genetic analysis of diverse norovirus genotypes and the role of non-structural proteins on viral diversification, shedding new light on the mechanisms of norovirus evolution and transmission.
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Genoma Viral/genética , Norovirus/genética , Evolução Biológica , Evolução Molecular , Estudo de Associação Genômica Ampla , HumanosRESUMO
Resumen Corynebacterium kroppenstedtii es un bacilo gram positivo corineforme lipofílico, poco frecuente en la clínica humana. Forma parte de la microbiota cutánea de los seres humanos y, por esta razón, su interpretación clínica es compleja. La mastitis granulomatosa es una enfermedad inflamatoria de origen incierto con baja incidencia. Se presentan dos casos clínicos en los que se describe la asociación de C. kroppenstedtii con mastitis granulomatosa. El tejido mamario es rico en lípidos. El carácter lipofílico de este microorganismo podría explicar su presencia en dicho tejido.
Abstract Corynebacterium kroppenstedtii is a rare lipophilic coryneform gram-positive bacillus. It is part of the human skin microbiota and, for this reason, its clinical interpretation is complex. Granulomatous mastitis is an inflammatory disease of uncertain origin with a low incidence. The association of C. kroppenstedtii with granulomatous mastitis was described in two clinical case reports. The lipophilic characteristics of this microorganism explains why it can be found in lipid-rich breast tissue.
Resumo Corynebacterium kroppenstedtii é um bacilo gram-positivo corineforme lipofílico poco frecuente. Faz parte da microbiota do seres humanos, por isso sua interpretação clínica é complexa. A mastite granulomatosa é uma doença inflamatória de origem incerta com baixa incidência. Foram apresentados dois casos clínicos nos quais é descrita a associação de C. kroppenstedtii com mastite granulomatosa. O tecido mamário é rico em lipídios. O caráter lipofílico desse microrganismo pode explicar sua presença em tal tecido.
Assuntos
Humanos , Feminino , Adulto , Corynebacterium , Abscesso , Mastite Granulomatosa/diagnóstico , Patologia , Microbiota , Biópsia Líquida , Granuloma , MicrobiologiaRESUMO
In developing countries, the acute gastroenteritis outbreaks submitted for viral testing are limited due to deficient surveillance programs. The aim of this study was to analyze a passive surveillance strategy for monitoring the molecular epidemiology of norovirus (NV) and counterbalance the genetic diversity data gap. Laboratory-confirmed rotavirus negative sporadic stool samples (N = 523) collected between 2010 and 2017 from children were selected from our archival collection and were tested for NV and sequencing was performed on the positive samples. Passive surveillance information was compared with the genetic diversity data that was available from local norovirus-confirmed gastroenteritis outbreaks. Each year, norovirus detection in the sporadic samples ranged from 12 to 29%. GI and GII norovirus were detected in 7 (1.3%) and 101 (19.3%) of the specimens, respectively. Four GI and six GII capsid genotypes were identified. Six out of 9 strains detected in the NV outbreaks panel were also identified in the set of sporadic samples either coincidently in the same year, the previous or the later year. Also, this set of samples depicted even better the circulating epidemic strain. Thus, implementing norovirus testing and genotyping in stool samples collected with other purposes represent a suitable strategy for providing genetic diversity information.
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Infecções por Caliciviridae , Norovirus , Infecções por Caliciviridae/epidemiologia , Criança , Países em Desenvolvimento , Surtos de Doenças , Fezes , Variação Genética , Genótipo , Humanos , Norovirus/genética , Filogenia , RNA ViralRESUMO
INTRODUCTION: In 2015, Argentina included Rotarix™ monovalent vaccine for universal administration and it showed a sharp decline in all-cause and rotavirus-confirmed cases as well as an immediate predominance of the G2P[4] genotype. The aim of this study was to analyze the impact of rotavirus vaccination on laboratory-confirmed cases and genotype distribution in Argentina following its introduction. MATERIAL AND METHODS: Prevalence and seasonality of laboratory-confirmed rotavirus cases data were assessed. Analyses of circulating genotypes were performed by conventional binary characterization (G and P typing). Phylogenetic study of VP7 gene was performed from emergent unusual strains. RESULTS: During 2017-2018, 1183 rotavirus cases (13.2%) were detected, and prevalence was uniform among different age subgroups. Weekly distribution showed a raise of confirmed cases around late July and early August. In 2017 the most frequently detected genotypes were G2P[4] and G3P[8]. However, in 2018 G12P[8] genotype increased and it was detected at a high rate. Noteworthy, the detection of uncommon G9P[4] and G8P[8] strains (bearing DS-1-like genetic backbones) was observed at moderate rates. DISCUSSION: Following four years of universal vaccination, the prevalence of rotavirus remained low in children under 5 years of age with a shift of the seasonal peak in early spring. The emergence of uncommon genotypes was due to introduction of new strains rather than to reassortment of local strains. Continuous monitoring of rotavirus burden of disease and genotype distribution provides useful evidence to evaluate existing immunization strategies and to contribute in the development of new vaccines as well.
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Genótipo , Infecções por Rotavirus/epidemiologia , Vacinas contra Rotavirus/administração & dosagem , Rotavirus/isolamento & purificação , Argentina/epidemiologia , Pré-Escolar , Monitoramento Epidemiológico , Humanos , Lactente , Prevalência , Rotavirus/genética , Infecções por Rotavirus/virologia , Estações do Ano , VacinaçãoRESUMO
Due to the high burden of disease associated with rotavirus, the massive vaccination in children before six months of age has been encouraged. Currently licensed oral live vaccines have shown low risk of associated adverse events in the general population. Noteworthy, postmarketing reports of severe gastroenteritis with persistent vaccine viral shedding in children with severe combined immunodeficiency (SCID) have led companies to include this inborn error of immunity as an additional contraindication. SCID is not usually screened in newborns from developing countries. Therefore, the administration of live attenuated vaccines represents the first contact of these patients with life-threatening pathogens. We describe a clinical case of an infant with SCID who suffered from persistent rotavirus symptomatic diarrhea after receiving the rotavirus oral vaccine and was found to be infected with the vaccine strain. This case attempts to contribute to the discussion of those diseases that need to be incorporated into a screening program since an early diagnosis permits clinicians to withhold live attenuated immunization.
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Infecções por Rotavirus , Vacinas contra Rotavirus , Rotavirus , Imunodeficiência Combinada Severa , Argentina , Criança , Humanos , Lactente , Recém-Nascido , Infecções por Rotavirus/prevenção & controle , Vacinas contra Rotavirus/efeitos adversos , Imunodeficiência Combinada Severa/complicações , Vacinação , Vacinas AtenuadasRESUMO
Tuberculin skin test (TST) and IFN-γ release assays are currently used to detect Mycobacterium tuberculosis (Mtb) infection but none of them differentiate active from latent infection (LTBI). Since improved tests to diagnose Mtb infection are required, we studied the immune response to Mtb latency antigen Rv2626c in individuals exposed to the bacteria during different periods. Tuberculosis patients (TB), TB close contacts (CC: subjects exposed to Mtb for less than three months) and healthcare workers (HW: individuals exposed to Mtb at least two years) were recruited and QuantiFERON (QFT) assay, TST and IFN-γ secretion to Rv2626c were analyzed. Twenty-two percent of the individuals assessed had discordant results between QFT and TST tests. Furthermore, QFT negative and QFT positive individuals produced differential levels of IFN-γ against Rv2626c, in direct association with their exposure period to Mtb. Actually, 91% of CC QFT negative subjects secreted low levels of IFN-γ to Rv2626c, whereas 43% of HW QFT negative people produced elevated IFN-γ amounts against Rv2626c. Conversely, 69% of CC QFT positive subjects didn´t produce IFN-γ to Rv2626c. Interestingly, a similar pattern of IgG anti-Rv2626c plasma levels was observed. Therefore, determination of IFN-γ and IgG levels against the dormancy antigen Rv2626c allows to identify established LTBI.
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Anticorpos Antibacterianos , Antígenos de Bactérias , Imunoglobulina G , Interferon gama , Tuberculose Latente , Mycobacterium tuberculosis , Adolescente , Adulto , Idoso , Anticorpos Antibacterianos/sangue , Anticorpos Antibacterianos/imunologia , Antígenos de Bactérias/sangue , Antígenos de Bactérias/imunologia , Feminino , Humanos , Imunoglobulina G/sangue , Imunoglobulina G/imunologia , Interferon gama/sangue , Interferon gama/imunologia , Tuberculose Latente/sangue , Tuberculose Latente/diagnóstico , Tuberculose Latente/imunologia , Masculino , Pessoa de Meia-Idade , Mycobacterium tuberculosis/imunologia , Mycobacterium tuberculosis/metabolismoRESUMO
Noroviruses are a leading cause of endemic and epidemic acute gastroenteritis in all age groups. However, in Latin America, there are limited and updated data regarding circulating genotypes. The aim of this study was to assess the prevalence and genetic diversity of norovirus outbreaks in Argentina from 2013 to 2018. Stool samples from 29 acute gastroenteritis (AGE) outbreaks were available for viral testing. Norovirus was detected in samples from 18 (62.1%) outbreaks (2 GI and 16 GII). Both GI outbreaks were typed as GI.6[P11] whereas 10 different GII genotypes were detected, in which GII.4 viruses were the most frequently detected (29.4%, associated with GII.P31 and GII.P16) followed by GII.1[P33] and GII.6[P7] (17.6% each). Like GII.4 viruses, GII.2 viruses were also detected in association with different polymerases (GII.P2 and GII.P16). Our findings underscore the importance of dual RNA-dependent RNA polymerase-VP1 typing since recombinant strains with new polymerase sequences emerge frequently suggesting a possible role in improved fitness of these viruses. This study represents the most recent multi-year assessment of the molecular epidemiology of norovirus strains associated with AGE outbreaks in Argentina. Molecular surveillance of norovirus has to be considered to monitor possible changes in dominant genotypes which may assist to inform the formulation of future vaccines.
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Infecções por Caliciviridae/epidemiologia , Gastroenterite/epidemiologia , Norovirus/genética , Argentina/epidemiologia , Surtos de Doenças , Gastroenterite/virologia , Genótipo , Humanos , Epidemiologia Molecular , Norovirus/classificação , Filogenia , RNA Viral/genéticaRESUMO
We report multiple nontypeable genotype II noroviruses circulating in South America; nucleotides differed by >25% from those of other genotypes. These viruses have been circulating in the Americas for ≈20 years and show recombination with other genotypes. Clues to norovirus natural history can guide development of treatment and prevention plans.
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Norovirus/genética , América/epidemiologia , Infecções por Caliciviridae/epidemiologia , Infecções por Caliciviridae/virologia , Genótipo , Humanos , Filogenia , Recombinação Genética/genéticaRESUMO
BACKGROUND: During the last decade, most of Latin American and the Caribbean (LAC) countries have implemented oral live rotavirus vaccines in their national vaccination programs with remarkable results. However, it has been suggested that massive vaccination could lead to the replacement of circulating genotypes or the emergence of new variants or neutralizing antibodies escape mutants, which may reduce the effectiveness of the vaccine. The objective was to analyze the genetic diversity of Group A rotavirus before and after the introduction of universal vaccination in LAC. METHODS: We conducted a systematic review of studies published in PubMed, Scielo and LILACS. There were considered only LAC countries with rotavirus massive vaccination strategy which had described circulating genotypes data in children under 5 years of age, either for surveillance or vaccine effectiveness purposes, from 2001 to 2017. Systematic review stages were carried out following the recommendations of PRISMA. RESULTS: Of the 18 countries that included any of the two licensed rotavirus vaccines in their national schedules since 2006, only 7 (~39%) presented studies of RVA genetic diversity before and after implementation, and met the inclusion criteria. Four of them (Argentina, Brazil, Colombia and Nicaragua) experienced a rapid switch from Wa-like to DS-1-like strains. Also, G1P[8] association, considered the most predominant worldwide in the pre-vaccination era, decreased significantly and was only frequently detected in Venezuela and Nicaragua. No defined pattern of emergence at high frequencies of unusual associations was observed in the post vaccination period, except for some evidence of G9P[4] in Colombia, G3P[6] and G1P[4] in Nicaragua. CONCLUSIONS: Even though the evidence shows a DS-1-like change trend, data from studies conducted in Latin America and the Caribbean are diverse and still not sufficient to assess the impact of vaccines on viral ecology or if genetic diversity is influenced by natural mechanisms of fluctuation.
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Infecções por Rotavirus/prevenção & controle , Vacinas contra Rotavirus/administração & dosagem , Rotavirus/genética , Anticorpos Neutralizantes/imunologia , Região do Caribe/epidemiologia , Pré-Escolar , Genótipo , Humanos , Programas de Imunização , América Latina/epidemiologia , Rotavirus/imunologia , Rotavirus/isolamento & purificação , Infecções por Rotavirus/virologia , Vacinas contra Rotavirus/imunologia , VacinaçãoRESUMO
Los estreptococos del grupo Streptococcus anginosus (GSA) comprenden uno de los grupos que conforman el grupo viridans de estreptococos y son parte de la microbiota humana habitual de la cavidad oral, del tracto respiratorio superior y del tracto gastrointestinal. Pueden producir colecciones purulentas de órganos sólidos, abscesos cutáneos y celulitis, entre otras infecciones. Este grupo posee numerosos factores de virulencia como hialuronidasa, adhesinas, enzimas extracelulares y hemolisinas. El objetivo de este trabajo fue presentar tres casos clínicos de infecciones asociadas a traumatismos vinculados con la cavidad oral como golpes de puño o mordeduras humanas. En todos ellos, los GSA desarrollaron como germen único, lo que pone de manifiesto su importante rol en este tipo de infecciones.
The Streptococcus anginosus group (SAG) is part of the viridans group streptococci and they belong to the normal human microbiota of the oral cavity, the upper respiratory tract and the gastrointestinal tract. It can produce purulent collections of solid organs, cutaneous abscesses and cellulitis, among other infections. This group has numerous virulence factors such as hyaluronidase, adhesins, extracellular enzymes and hemolysins. The objective of this work is to present three clinical cases of infections associated with trauma related to the oral cavity such as fist bumps or human bites. In all of them, the SAG developed as a single organism, which highlights its important role in this type of infection.
Os estreptococos do grupo do Streptococcus anginosus (GSA) são parte de um dos grupos que constituem o grupo viridans e fazem parte da microbiota normal da cavidade oral, do trato respiratório superior e do trato gastrointestinal dos seres humanos. Podem produzir coleções purulentas de órgãos sólidos, abscessos cutâneos e celulite, entre outras infecções. Este grupo possui numerosos fatores de virulência, como hialuronidases, adesinas, enzimas extracelulares e hemolisinas. O objetivo desse trabalho foi apresentar três casos clínicos de infecções associadas a traumatismos associados à cavidade oral, decorrentes de socos ou mordidas humanas. Em todos eles os GSA se desenvolveram como germe único, o que põe de manifesto seu papel importante nesse tipo de infecções.
Assuntos
Humanos , Ferimentos e Lesões , Mordeduras e Picadas , Mordeduras Humanas , Streptococcus anginosus , Boca , Pele , Celulite (Flegmão) , Streptococcus anginosus/classificação , Fatores de Virulência , Abscesso , Enzimas , Microbiota , Celulite , Hialuronoglucosaminidase , InfecçõesRESUMO
La estrategia de control epidemiológico de la tuberculosis (TB) incluye tanto el diagnóstico y tratamiento precoz de los pacientes bacilíferos, como la identificación de aquellos con infección tuberculosa latente (ITBL) quienes representan el reservorio patógeno en la población. Objetivo: Comparar los resultados obtenidos utilizando la prueba de tuberculina (PPD) y el QuantiFERON-TB Gold Plus (QTF) en un grupo de contactos domiciliarios de pacientes con TB pulmonar bacilífera, de la Ciudad de Buenos Aires. Se utilizaron dos puntos de corte para considerar la PPD positiva: ≥ 5 mm (PPD-5) y ≥ 10 mm (PPD-10). Materiales y métodos: Se extrajeron muestras de sangre para QTF en contactos domiciliarios de pacientes con TB bacilífera, seguido inmediatamente de la aplicación de PPD. Se consideró al QTF como la prueba de referencia a partir de la cual comparar la PPD calculando la sensibilidad (S), especificidad (E), valor predictivo positivo (VPP), valor predictivo negativo (VPN) y coeficiente de correlación Kappa. Resultados: Se incluyeron 48 contactos (33 mujeres, 69%), edad 38.8 ± 19 años, 27 (56%) argentinos, 18 (38%) bolivianos y 3(6%) peruanos, correspondientes a 37 casos de TB. Un solo contacto refirió no haberse aplicado la BCG, en 44 se objetivó la cicatriz. El QTF resultó positivo en 23 (47.9%) e indeterminado en 2 casos (4.2%). Excluyendo del análisis a los indeterminados, no hubo diferencias significativas entre contactos con QTF positivo y negativo al considerar la edad (33.8 ± 16 vs 42.1 ± 20 años), nacionalidad: argentinos (12 de 26, 46%) vs extranjeros (11 de 20, 55%) y sexo: mujeres (18 de 32, 56%) vs hombres (5 de 14, 36%). Utilizando PPD-5 hubo 28 (60.9%) positivos y 13 (28.3%) con PPD-10. Comparando PPD-5 vs PPD-10: S = 73.9 vs 34.8%, E = 52.2 vs 78.3%, VPP = 60.1 vs 61.5% y VPN = 66.7 vs 54.5%. Los resultados coincidentes (positivos y negativos) entre QTF y PPD fueron 29 (63%) para PPD-5 y 26 (56.5%) con PPD-10. Expresados con el coeficiente Kappa muestran concordancia débil (0.261) e insignificante (0.130), respectivamente. Conclusiones: considerando al QTF como el método de referencia por su mayor especificidad, la PPD-5, aunque menos específica, resultó más sensible que la PPD-10 para diagnosticar infección tuberculosa latente en el grupo de contactos domiciliarios estudiados
Assuntos
Humanos , Tuberculose Latente , Tuberculose , Teste TuberculínicoRESUMO
The epidemiological control strategy of tuberculosis (TB) includes both the diagnosis and early treatment of baciliferous patients and the identification of individuals with latent tuberculosis infection (LTBI), who represent the pathogen reservoir within the population. Objective: To compare the results obtained using the tuberculin test (PPD, Purified Protein Derivative) and the QuantiFERON-TB Gold Plus (QTF) in a group of household contacts of patients with bacillary pulmonary TB in the city of Buenos Aires. We used two cutoff points to consider PPD as positive: ≥ 5 mm (PPD-5) and ≥ 10 mm (PPD-10). Materials and Methods: Blood samples for QTF were taken from household contacts of patients with bacillary TB, followed immediately by the application of PPD. The QTF was considered as the reference test from which to compare the PPD by calculating sensitivity (S), specificity (E), positive predictive value (PPV), negative predictive value (NPV) and Kappa correlation coefficient. Results: 48 contacts were included (33 women, 69%), age 38.8 ± 19 years, 27 (56%) Argentinean, 18 (38%) Bolivians and 3 (6%) Peruvians, 37 were cases of TB. Only one contact informed She/she hadn't received the BCG; and 44 subjects showed the BCG scar. The QTF was positive in 23 individuals (47.9%) and undetermined in 2 cases (4.2%). Excluding the indeterminate cases from the analysis, there were no significant differences between positive and negative QTF contacts regarding age (33.8 ± 16 vs. 42.1 ± 20 years), nationality: Argentinean (12 of 26.46%) vs. foreigners (11 of 20.55%) and sex: women (18 of 32, 56%) vs. men (5 of 14, 36%). There were 28 (60.9%) positive cases with PPD-5 and 13 (28.3%) with PPD-10. Comparison between PPD-5 vs. PPD-10: S = 73.9 vs. 34.8%, E = 52.2 vs. 78.3%, PPV = 60.1 vs. 61.5% and NPV = 66.7 vs. 54.5%. The coincident results (positive and negative) between QTF and PPD were 29 (63%) for PPD-5 and 26 (56.5%) for PPD-10. Expressed with the Kappa coefficient, they show weak (0.261) and insignificant (0.130) concordance, respectively. Conclusions: Considering the QTF as the reference method for its higher specificity, PPD-5, although less specific, was more sensitive than PPD-10 for the diagnosis of latent tuberculosis infection in the group of household contacts under study.