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1.
FEBS J ; 291(9): 2009-2022, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38380733

RESUMO

Laminaripentaose (L5)-producing ß-1,3-glucanases can preferentially cleave the triple-helix curdlan into ß-1,3-glucooligosaccharides, especially L5. In this study, a newly identified member of the glycoside hydrolase family 64, ß-1,3-glucanase from Streptomyces pratensis (SpGlu64A), was functionally and structurally characterized. SpGlu64A shared highest identity (30%) with a ß-1,3-glucanase from Streptomyces matensis. The purified SpGlu64A showed maximal activity at pH 7.5 and 50 °C, and exhibited strict substrate specificity toward curdlan (83.1 U·mg-1). It efficiently hydrolyzed curdlan to produce L5 as the end product. The overall structure of SpGlu64A consisted of a barrel domain and a mixed (α/ß) domain, which formed an unusually wide groove with a crescent-like structure. In the two complex structures (SpGlu64A-L3 and SpGlu64A-L4), two oligosaccharide chains were captured and the triple-helical structure was relatively compatible with the wide groove, which suggested the possibility of binding to the triple-helical ß-1,3-glucan. A catalytic framework (ß6-ß9-ß10) and the steric hindrance formed by the side chains of residues Y161, N163, and H393 in the catalytic groove were predicted to complete the exotype-like cleavage manner. On the basis of the structure, a fusion protein with the CBM56 domain (SpGlu64A-CBM) and a mutant (Y161F; by site-directed mutation) were obtained, with 1.2- and 1.7-fold increases in specific activity, respectively. Moreover, the combined expression of SpGlu64A-CBM and -Y161F improved the enzyme activity by 2.63-fold. The study will not only be helpful in understanding the reaction mechanism of ß-1,3-glucanases but will also provide a basis for further enzyme engineering.


Assuntos
Oligossacarídeos , Streptomyces , beta-Glucanas , Streptomyces/enzimologia , Streptomyces/genética , Especificidade por Substrato , beta-Glucanas/metabolismo , Oligossacarídeos/metabolismo , Oligossacarídeos/química , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Proteínas de Bactérias/química , Modelos Moleculares , Glucana 1,3-beta-Glucosidase/metabolismo , Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/química , Sequência de Aminoácidos , Glicosídeo Hidrolases/genética , Glicosídeo Hidrolases/metabolismo , Glicosídeo Hidrolases/química , Domínio Catalítico , Cristalografia por Raios X , Hidrólise , Concentração de Íons de Hidrogênio , Cinética
2.
Carbohydr Polym ; 273: 118609, 2021 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-34561008

RESUMO

Chitooligosaccharides (CHOS) with multiple biological activities are usually produced through enzymatic hydrolysis of chitosan or chitin. However, purification and recycling of the enzyme have largely limited the advancement of CHOS bioproduction. Here, we engineered a novel enzyme by fusing the native chitosanase Csn75 with a carbohydrate-binding module (CBM) that can specifically bind to curdlan. The recombinase Csn75-CBM was successfully expressed by Pichia pastoris and allowed one-step purification and immobilization in the chitosanase immobilized curdlan packed-bed reactor (CICPR), where a maximum adsorption capacity of 39.59 mg enzyme/g curdlan was achieved. CHOS with degrees of polymerization of 2-5 (a hydrolysis yield of 97.75%), 3-6 (75.45%), and 3-7 (73.2%) were continuously produced by adjusting the ratio of enzyme and chitosan or the flow rate of chitosan. Moreover, the CICPR exhibited good stability and reusability after several cycles. The recombinase Csn75-CBM has greatly improved the efficiency of the bioproduction of CHOS.


Assuntos
Quitosana/síntese química , Enzimas Imobilizadas/química , Glucana 1,3-beta-Glucosidase/química , Glicosídeo Hidrolases/química , Oligossacarídeos/síntese química , Aspergillus fumigatus/enzimologia , Bacillus/enzimologia , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Enzimas Imobilizadas/genética , Proteínas Fúngicas/química , Proteínas Fúngicas/genética , Glucana 1,3-beta-Glucosidase/genética , Glicosídeo Hidrolases/genética , Mutação , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/genética , Domínios Proteicos/genética , Engenharia de Proteínas , Proteínas Recombinantes de Fusão/química , Proteínas Recombinantes de Fusão/genética , beta-Glucanas
3.
Int J Biol Macromol ; 163: 1010-1025, 2020 Nov 15.
Artigo em Inglês | MEDLINE | ID: mdl-32663561

RESUMO

The laminarans are biologically active water-soluble polysaccharide (1,3;1,6-ß-D-glucans) of brown algae. These polysaccharides are an attractive object for research due to its relatively simple structure, low toxicity, and various biological effects. 1,3-ß-D-glucanases are an effective tool for studying the structure of laminarans, and can also be used to obtain new biologically active derivatives. This review is to outline what is currently known about laminarans and enzymes that catalyze of their transformation. We focused on information about sources, structure and properties of laminarans and 1,3-ß-D-glucanases, methods of obtaining and structural elucidation of laminarans, and biological activity of laminarans and products of their enzymatic transformation. It has an increased focus on the immunomodulating and anticancer activity of laminarans and their derivatives.


Assuntos
Glucana 1,3-beta-Glucosidase/química , Glucanos/química , Animais , Humanos , Phaeophyceae/química , Polissacarídeos/química , Relação Estrutura-Atividade
4.
Nat Chem Biol ; 16(8): 920-929, 2020 08.
Artigo em Inglês | MEDLINE | ID: mdl-32451508

RESUMO

The fundamental and assorted roles of ß-1,3-glucans in nature are underpinned on diverse chemistry and molecular structures, demanding sophisticated and intricate enzymatic systems for their processing. In this work, the selectivity and modes of action of a glycoside hydrolase family active on ß-1,3-glucans were systematically investigated combining sequence similarity network, phylogeny, X-ray crystallography, enzyme kinetics, mutagenesis and molecular dynamics. This family exhibits a minimalist and versatile (α/ß)-barrel scaffold, which can harbor distinguishing exo or endo modes of action, including an ancillary-binding site for the anchoring of triple-helical ß-1,3-glucans. The substrate binding occurs via a hydrophobic knuckle complementary to the canonical curved conformation of ß-1,3-glucans or through a substrate conformational change imposed by the active-site topology of some fungal enzymes. Together, these findings expand our understanding of the enzymatic arsenal of bacteria and fungi for the breakdown and modification of ß-1,3-glucans, which can be exploited for biotechnological applications.


Assuntos
Glucana 1,3-beta-Glucosidase/química , Glicosídeo Hidrolases/química , beta-Glucanas/química , Sequência de Aminoácidos/genética , Sítios de Ligação/fisiologia , Domínio Catalítico/fisiologia , Cristalografia por Raios X/métodos , Glucana 1,3-beta-Glucosidase/metabolismo , Glucanos/química , Glicosídeos/química , Modelos Moleculares , Especificidade por Substrato/fisiologia
5.
Electron. j. biotechnol ; 41: 60-71, sept. 2019. graf, tab, ilus
Artigo em Inglês | LILACS | ID: biblio-1087169

RESUMO

Background: The aim of this work was to purify and characterize exo-ß-1,3-glucanase, namely, TtBgnA, from the thermophilic fungus Thielavia terrestris Co3Bag1 and to identify the purified enzyme. Results: The thermophilic biomass-degrading fungus T. terrestris Co3Bag1 displayed ß-1,3-glucanase activity when grown on 1% glucose. An exo-ß-1,3-glucanase, with an estimated molecular mass of 129 kDa, named TtBgnA, was purified from culture filtrates from T. terrestris Co3Bag1. The enzyme exhibited optimum activity at pH 6.0 and 70°C and half-lives (t1/2) of 54 and 37 min at 50 and 60°C, respectively. Substrate specificity analysis showed that laminarin was the best substrate studied for TtBgnA. When laminarin was used as the substrate, the apparent KM and Vmax values were determined to be 2.2 mg mL-1 and 10.8 U/mg, respectively. Analysis of hydrolysis products by thin-layer chromatography (TLC) revealed that TtBgnA displays an exo mode of action. Additionally, the enzyme was partially sequenced by tandem mass spectrometry (MS/MS), and the results suggested that TtBgnA from T. terrestris Co3Bag1 could be classified as a member of the GH-31 family. Conclusions: This report thus describes the purification and characterization of TtBgnA, a novel exo-ß-1,3-glucanase of the GH-31 family from the thermophilic fungus T. terrestris Co3Bag1. Based on the biochemical properties displayed by TtBgnA, the enzyme could be considered as a candidate for potential biotechnological applications.


Assuntos
Sordariales/enzimologia , Glucana 1,3-beta-Glucosidase/química , Temperatura , Estabilidade Enzimática , Celulases , Glucana 1,3-beta-Glucosidase/isolamento & purificação , Eletroforese em Gel de Poliacrilamida , Espectrometria de Massas em Tandem , Ensaios Enzimáticos , Concentração de Íons de Hidrogênio
6.
Biopolymers ; 110(9): e23315, 2019 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-31180595

RESUMO

ß-1,3-d-glucan with different degrees of branching were obtained by selectively and gradually removing side chains from schizophyllan, a water-soluble triple helical polysaccharide, using the Smith degradation. Size exclusion chromatography combined with a multi-angle light scattering detection was performed in aqueous 0.1 M NaCl. The degree of branching decreased after the Smith degradation, while the molar mass distributions were almost unchanged. The molecular conformation of the Smith-degraded ß-1,3-d-glucan was analyzed on the basis of the molar mass dependency of the radius gyration, and found to be comparable to the original triple helix of schizophyllan. Differential scanning calorimetry in deuterium oxide-hexadeuterodimethylsulfoxide mixtures was performed to investigate the effects of the degree of branching on the cooperative order-disorder transition. Removal of side chains affects both the transition temperature and transition enthalpy. The ordered structure is formed by the residual side chains in the triplex unit, so that the linear cooperative system of the triplex is maintained after the Smith degradation.


Assuntos
Sizofirano/química , beta-Glucanas/química , Varredura Diferencial de Calorimetria , Configuração de Carboidratos , Cromatografia em Gel , Difusão Dinâmica da Luz , Glucana 1,3-beta-Glucosidase/química , Glucana 1,3-beta-Glucosidase/metabolismo , Peso Molecular , Proteoglicanas , Cloreto de Sódio , Soluções/química , Termodinâmica , Água/química
7.
J Sci Food Agric ; 99(8): 4043-4053, 2019 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-30737796

RESUMO

BACKGROUND: Resveratrol, an extensively recognized phytochemical that belongs to the stilbene family, is abundant in grape peel which is discarded as a by-product during grape juice processing. RESULTS: In this study, we established that pre-heating grape peel above 75 °C significantly improved the extractability of resveratrol and its glucoside piceid. In particular, thermal heating of grape peel at 95 °C for 10 min, followed by treatment with a mixture of exo-1,3-ß-glucanase and pectinases at 50 °C for 60 min, dramatically increased the conversion of piceid into resveratrol and the overall extractability of this phytochemical by 50%. Furthermore, thermal pre-treatment promoted a substantial increase in the total phenol, flavonoid, and anthocyanin concentrations in the grape peel extract. Ultimately, resveratrol-enriched grape peel extract significantly augmented the antioxidant response in vitro, possibly by attenuating the accumulation of intracellular reactive oxygen species via the Nrf2 signaling pathway. CONCLUSION: The method developed in this study for preparing grape peel extract introduces a potential low-cost green processing for the industrial fortification of food products with resveratrol and other health-beneficial antioxidants. © 2019 Society of Chemical Industry.


Assuntos
Antioxidantes/química , Manipulação de Alimentos/métodos , Extratos Vegetais/química , Resveratrol/química , Vitis/química , Antioxidantes/isolamento & purificação , Biocatálise , Manipulação de Alimentos/instrumentação , Frutas/química , Glucana 1,3-beta-Glucosidase/química , Temperatura Alta , Extratos Vegetais/isolamento & purificação , Poligalacturonase/química , Resveratrol/isolamento & purificação , Resíduos/análise
8.
Interdiscip Sci ; 10(1): 157-168, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-27475956

RESUMO

We report a detailed structural analysis of the psychrophilic exo-ß-1,3-glucanase (GaExg55) from Glaciozyma antarctica PI12. This study elucidates the structural basis of exo-1,3-ß-1,3-glucanase from this psychrophilic yeast. The structural prediction of GaExg55 remains a challenge because of its low sequence identity (37 %). A 3D model was constructed for GaExg55. Threading approach was employed to determine a suitable template and generate optimal target-template alignment for establishing the model using MODELLER9v15. The primary sequence analysis of GaExg55 with other mesophilic exo-1,3-ß-glucanases indicated that an increased flexibility conferred to the enzyme by a set of amino acids substitutions in the surface and loop regions of GaExg55, thereby facilitating its structure to cold adaptation. A comparison of GaExg55 with other mesophilic exo-ß-1,3-glucanases proposed that the catalytic activity and structural flexibility at cold environment were attained through a reduced amount of hydrogen bonds and salt bridges, as well as an increased exposure of the hydrophobic side chains to the solvent. A molecular dynamics simulation was also performed using GROMACS software to evaluate the stability of the GaExg55 structure at varying low temperatures. The simulation result confirmed the above findings for cold adaptation of the psychrophilic GaExg55. Furthermore, the structural analysis of GaExg55 with large catalytic cleft and wide active site pocket confirmed the high activity of GaExg55 to hydrolyze polysaccharide substrates.


Assuntos
Adaptação Fisiológica , Basidiomycota/enzimologia , Temperatura Baixa , Glucana 1,3-beta-Glucosidase/química , Sequência de Aminoácidos , Substituição de Aminoácidos/genética , Modelos Moleculares , Simulação de Dinâmica Molecular , Estrutura Secundária de Proteína , Alinhamento de Sequência , Análise de Sequência de Proteína
9.
J Biol Chem ; 292(41): 16955-16968, 2017 10 13.
Artigo em Inglês | MEDLINE | ID: mdl-28827308

RESUMO

BH0236 from Bacillus halodurans is a multimodular ß-1,3-glucanase comprising an N-terminal family 81 glycoside hydrolase catalytic module, an internal family 6 carbohydrate-binding module (CBM) that binds the nonreducing end of ß-1,3-glucan chains, and an uncharacterized C-terminal module classified into CBM family 56. Here, we determined that this latter CBM, BhCBM56, bound the soluble ß-1,3-glucan laminarin with a dissociation constant (Kd ) of ∼26 µm and displayed higher affinity for insoluble ß-1,3-glucans with Kd values of ∼2-10 µm but lacked affinity for ß-1,3-glucooligosaccharides. The X-ray crystal structure of BhCBM56 and NMR-derived chemical shift mapping of the binding site revealed a ß-sandwich fold, with the face of one ß-sheet possessing the ß-1,3-glucan-binding surface. On the basis of the functional and structural properties of BhCBM56, we propose that it binds a quaternary polysaccharide structure, most likely the triple helix adopted by polymerized ß-1,3-glucans. Consistent with the BhCBM56 and BhCBM6/56 binding profiles, deletion of the CBM56 from BH0236 decreased activity of the enzyme on the insoluble ß-1,3-glucan curdlan but not on soluble laminarin; additional deletion of the CBM6 also did not affect laminarin degradation but further decreased curdlan hydrolysis. The pseudo-atomic solution structure of BH0236 determined by small-angle X-ray scattering revealed structural insights into the nature of avid binding by the BhCBM6/56 pair and how the orientation of the active site in the catalytic module factors into recognition and degradation of ß-1,3-glucans. Our findings reinforce the notion that catalytic modules and their cognate CBMs have complementary specificities, including targeting of polysaccharide quaternary structure.


Assuntos
Bacillus/enzimologia , Proteínas de Bactérias/química , Glucana 1,3-beta-Glucosidase/química , Bacillus/genética , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sítios de Ligação , Cristalografia por Raios X , Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/metabolismo , Polissacarídeos/química , Polissacarídeos/metabolismo , Estrutura Secundária de Proteína
10.
Planta ; 245(1): 77-91, 2017 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-27580619

RESUMO

MAIN CONCLUSION: A gene for ß-1,3-glucanase was isolated from carnivorous sundew. It is active in leaves and roots, but not in digestive glands. Analyses in transgenic tobacco suggest its function in germination. Ancestral plant ß-1,3-glucanases (EC 3.2.1.39) played a role in cell division and cell wall remodelling, but divergent evolution has extended their roles in plant defense against stresses to decomposition of prey in carnivorous plants. As available gene sequences from carnivorous plants are rare, we isolated a glucanase gene from roundleaf sundew (Drosera rotundifolia L.) by a genome walking approach. Computational predictions recognized typical gene features and protein motifs described for other plant ß-1,3-glucanases. Phylogenetic reconstructions suggest strong support for evolutionary relatedness to class V ß-1,3-glucanases, including homologs that are active in the traps of related carnivorous species. The gene is expressed in sundew vegetative tissues but not in flowers and digestive glands, and encodes for a functional enzyme when expressed in transgenic tobacco. Detailed analyses of the supposed promoter both in silico and in transgenic tobacco suggest that this glucanase plays a role in development. Specific spatiotemporal activity was observed during transgenic seed germination. Later during growth, the sundew promoter was active in marginal and sub-marginal areas of apical true leaf meristems of young tobacco plants. These results suggest that the isolated glucanase gene is regulated endogenously, possibly by auxin. This is the first report on a nuclear gene study from sundew.


Assuntos
Drosera/enzimologia , Evolução Molecular , Glucana 1,3-beta-Glucosidase/genética , Sequência de Aminoácidos , Simulação por Computador , Drosera/genética , Genes de Plantas , Glucana 1,3-beta-Glucosidase/química , Glucana 1,3-beta-Glucosidase/metabolismo , Glucuronidase/metabolismo , Motivos de Nucleotídeos , Filogenia , Plantas Geneticamente Modificadas , Regiões Promotoras Genéticas/genética , Alinhamento de Sequência , Estresse Fisiológico/genética , Nicotiana/genética , Fatores de Transcrição/metabolismo
11.
Molecules ; 21(9)2016 Sep 10.
Artigo em Inglês | MEDLINE | ID: mdl-27626400

RESUMO

Polysaccharopeptides (PSPs) are among the main bioactive constituents of Trametes versicolor (T. versicolor). The purpose of this research was to investigate the antioxidant activities of enzymatic hydrolysates obtained from T. versicolor polysaccharopeptides by 80 U/mL ß-1,3-glucanase (PSPs-EH80). The half-inhibitory concentration (IC50) of PSPs-EH80 in metal chelating assay, ABTS and DPPH radical scavenging test results were 0.83 mg/mL, 0.14 mg/mL and 0.52 mg/mL, respectively, which were lower than that of PSPs-EH 20 U/mL. The molecular weights of the PSPs-EH80 hydrolysates were 300, 190, 140 and 50 kDa, respectively, and the hydrolysis of polysaccharides by ß-1,3-glucanase did not change the original functional group. PSPs-EH80 reduced the reactive oxygen species (ROS) content at least twice that of treatment without PSPs-EH80. In addition, an oxidative damage test showed that PSPs-EH80 can improve HaCaT cell survival. According to our results, PSP demonstrates the potential of anti-oxidative damage; besides, enzyme hydrolysis can improve the ability of the PSP.


Assuntos
Antioxidantes , Glucana 1,3-beta-Glucosidase/química , Proteoglicanas , Espécies Reativas de Oxigênio/metabolismo , Trametes/química , Antioxidantes/química , Antioxidantes/farmacologia , Linhagem Celular , Humanos , Hidrólise , Proteoglicanas/química , Proteoglicanas/farmacologia
12.
Appl Microbiol Biotechnol ; 100(4): 1765-1776, 2016 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-26490553

RESUMO

A glycoside hydrolase (GH) family 17 ß-1,3-glucanosyltransferase (RmBgt17A) from Rhizomucor miehei CAU432 (CGMCC No. 4967) shared very low sequence homology (∼20 % identity) with that of other ß-1,3-glucanases,despite their similar structural folds. Structural comparison and sequence alignment between RmBgt17A and GH family 17 ß-1,3-glucanases suggested important roles for three residues (Tyr102, Trp157, and Glu158) located in the substrate-binding cleft of RmBgt17A in transglycosylation activity. A series of site-directed mutagenesis studies indicated that a single Glu-to-Ala mutation (E158A) modulates the function of RmBgt17A to that of a ß-1,3-glucanase. Mutant E158A exhibited high hydrolytic activity (39.95 U/mg) toward reduced laminarin, 348.5-fold higher than the wild type. Optimal pH and temperature of the purified RmBgt17A-E158A were 4.5 and 55 °C, respectively. TLC analysis suggested that RmBgt17A-E158A is an endo-ß-1,3-glucanase. Our study provides novel insight into protein engineering of the substrate-binding cleft of glycoside hydrolases to modulate the function of transglycosylation and hydrolysis.


Assuntos
Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/metabolismo , Glucana Endo-1,3-beta-D-Glucosidase/genética , Glucana Endo-1,3-beta-D-Glucosidase/metabolismo , Engenharia de Proteínas , Rhizomucor/enzimologia , Sequência de Aminoácidos , Substituição de Aminoácidos , Cromatografia em Camada Fina , Glucana 1,3-beta-Glucosidase/química , Glucana Endo-1,3-beta-D-Glucosidase/química , Concentração de Íons de Hidrogênio , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Conformação Proteica , Rhizomucor/genética , Alinhamento de Sequência , Temperatura
13.
Appl Microbiol Biotechnol ; 100(1): 203-14, 2016 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-26392136

RESUMO

A ß-1,3-glucanase (LpGluA) of deep subseafloor Laceyella putida JAM FM3001 was purified to homogeneity from culture broth. The molecular mass of the enzyme was around 36 kDa as judged by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE). LpGluA hydrolyzed curdlan optimally at pH 4.2 and 80 °C. In spite of the high optimum temperature, LpGluA showed relatively low thermostability, which was stabilized by adding laminarin, xylan, colloidal chitin, pectin, and its related polysaccharides. The gene for LpGluA cloned by using degenerate primers was composed of 1236 bp encoding 411 amino acids. Production of both LpGluA and a chitinase (LpChiA; Shibasaki et al. Appl Microbiol Biotechnol 98, 7845-7853, 2014) was induced by adding N-acetylglucosamine (GluNAc) to a culture medium of strain JAM FM3001. Construction of expression vectors containing the gene for LpGluA and its flanking regions showed the existence of a putative repressor protein.


Assuntos
Bacillales/enzimologia , Bacillales/genética , Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/metabolismo , Acetilglucosamina/metabolismo , Sequência de Aminoácidos , Bacillales/isolamento & purificação , Sequência de Bases , Clonagem Molecular , Meios de Cultura/química , Eletroforese em Gel de Poliacrilamida , Estabilidade Enzimática , Sedimentos Geológicos , Glucana 1,3-beta-Glucosidase/química , Glucana 1,3-beta-Glucosidase/isolamento & purificação , Concentração de Íons de Hidrogênio , Hidrólise , Dados de Sequência Molecular , Peso Molecular , Temperatura , Ativação Transcricional , beta-Glucanas/metabolismo
14.
Sci Rep ; 5: 15073, 2015 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-26469317

RESUMO

Mycobacterium tuberculosis (Mtb) remains a leading cause of morbidity and mortality worldwide, as two billion people are latently infected with Mtb. To address Mtb drug resistance and the limitations of current vaccines, the characteristics of candidate Mtb vaccines need to be explored. Here, we report the three-dimensional structure of Rv0315 at 1.70 Å resolution, a novel immunostimulatory antigen of Mtb, and demonstrate that Rv0315 is an inactive ß-1,3-glucanase of the glycoside hydrolase 16 (GH16) family. Our study further elaborates the molecular basis for the lack of glucan recognition by Rv0315. Rv0315 has a large open groove, and this particular topology cannot bind oligosaccharide chains in solution, thus explaining the lack of detectable hydrolytic activity towards its substrate. Additionally, we identified Glu-176, a conserved catalytic residue in GH16 endo-ß-1,3-glucanases, as essential for Rv0315 to induce immunological responses. These results indicate that Rv0315 likely diverged from a broad-specificity ancestral GH16 glucanase, and this inactive member of the GH16 family offers new insights into the GH16 glucanase. Together, our findings suggest that an inactive ß-1,3-glucanase in Mtb drives T-helper 1 (Th1) immune responses, which may help develop more effective vaccines against Mtb infection.


Assuntos
Antígenos de Bactérias/química , Proteínas de Bactérias/química , Glucana 1,3-beta-Glucosidase/química , Modelos Moleculares , Mycobacterium tuberculosis/imunologia , Conformação Proteica , Antígenos de Bactérias/genética , Antígenos de Bactérias/imunologia , Proteínas de Bactérias/genética , Proteínas de Bactérias/imunologia , Sequência de Bases , Sítios de Ligação , Diferenciação Celular/imunologia , Cristalografia por Raios X , Células Dendríticas/citologia , Células Dendríticas/imunologia , Glucana 1,3-beta-Glucosidase/imunologia , Glucana 1,3-beta-Glucosidase/metabolismo , Glucanos/metabolismo , Humanos , Hidrólise , Simulação de Acoplamento Molecular , Dados de Sequência Molecular , Mycobacterium tuberculosis/genética , NF-kappa B/metabolismo , Filogenia , Ligação Proteica , Alinhamento de Sequência , Transdução de Sinais , Relação Estrutura-Atividade , Especificidade por Substrato
15.
Arch Biochem Biophys ; 580: 93-101, 2015 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-26151774

RESUMO

Ole e 9 and Fra e 9 are two allergenic ß-1,3-glucanases from olive and ash tree pollens, respectively. Both proteins present a modular structure with a catalytic N-terminal domain and a carbohydrate-binding module (CBM) at the C-terminus. Despite their significant sequence resemblance, they differ in some functional properties, such as their catalytic activity and the carbohydrate-binding ability. Here, we have studied the different capability of the recombinant C-terminal domain of both allergens to bind laminarin by NMR titrations, binding assays and ultracentrifugation. We show that rCtD-Ole e 9 has a higher affinity for laminarin than rCtD-Fra e 9. The complexes have different exchange regimes on the NMR time scale in agreement with the different affinity for laminarin observed in the biochemical experiments. Utilising NMR chemical shift perturbation data, we show that only one side of the protein surface is affected by the interaction and that the binding site is located in the inter-helical region between α1 and α2, which is buttressed by aromatic side chains. The binding surface is larger in rCtD-Ole e 9 which may account for its higher affinity for laminarin relative to rCtD-Fra e 9.


Assuntos
Alérgenos/química , Antígenos de Plantas/química , Glucana 1,3-beta-Glucosidase/química , Glucanos/química , Proteínas de Plantas/química , beta-Glucosidase/química , Alérgenos/genética , Alérgenos/imunologia , Sequência de Aminoácidos , Antígenos de Plantas/genética , Antígenos de Plantas/imunologia , Sítios de Ligação , Fraxinus/química , Fraxinus/enzimologia , Expressão Gênica , Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/imunologia , Humanos , Modelos Moleculares , Dados de Sequência Molecular , Ressonância Magnética Nuclear Biomolecular , Olea/química , Olea/enzimologia , Pichia/genética , Pichia/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/imunologia , Pólen/química , Pólen/imunologia , Ligação Proteica , Estrutura Secundária de Proteína , Estrutura Terciária de Proteína , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/imunologia , Homologia de Sequência de Aminoácidos , beta-Glucosidase/genética , beta-Glucosidase/imunologia
16.
PLoS One ; 10(7): e0133066, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-26177095

RESUMO

Endo-ß-1,3-glucanases are widespread enzymes with glycosyl hydrolitic activity involved in carbohydrate remodelling during the germination and pollen tube growth. Although members of this protein family with allergenic activity have been reported, their effective contribution to allergy is little known. In this work, we identified Fra e 9 as a novel allergenic ß-1,3-glucanase from ash pollen. We produced the catalytic and carbohydrate-binding domains as two independent recombinant proteins and characterized them from structural, biochemical and immunological point of view in comparison to their counterparts from olive pollen. We showed that despite having significant differences in biochemical activity Fra e 9 and Ole e 9 display similar IgE-binding capacity, suggesting that ß-1,3-glucanases represent an heterogeneous family that could display intrinsic allergenic capacity. Specific cDNA encoding Fra e 9 was cloned and sequenced. The full-length cDNA encoded a polypeptide chain of 461 amino acids containing a signal peptide of 29 residues, leading to a mature protein of 47760.2 Da and a pI of 8.66. An N-terminal catalytic domain and a C-terminal carbohydrate-binding module are the components of this enzyme. Despite the phylogenetic proximity to the olive pollen ß-1,3-glucanase, Ole e 9, there is only a 39% identity between both sequences. The N- and C-terminal domains have been produced as independent recombinant proteins in Escherichia coli and Pichia pastoris, respectively. Although a low or null enzymatic activity has been associated to long ß-1,3-glucanases, the recombinant N-terminal domain has 200-fold higher hydrolytic activity on laminarin than reported for Ole e 9. The C-terminal domain of Fra e 9, a cysteine-rich compact structure, is able to bind laminarin. Both molecules retain comparable IgE-binding capacity when assayed with allergic sera. In summary, the structural and functional comparison between these two closely phylogenetic related enzymes provides novel insights into the complexity of ß-1,3-glucanases, representing a heterogeneous protein family with intrinsic allergenic capacity.


Assuntos
Alérgenos/química , Glucana 1,3-beta-Glucosidase/química , Imunoglobulina E/química , Proteínas de Plantas/química , Pólen/química , Alérgenos/imunologia , Alérgenos/metabolismo , Sequência de Aminoácidos , Antígenos de Plantas/química , Antígenos de Plantas/genética , Antígenos de Plantas/imunologia , Domínio Catalítico , Clonagem Molecular , Escherichia coli/genética , Escherichia coli/metabolismo , Fraxinus/química , Expressão Gênica , Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/imunologia , Humanos , Soros Imunes/química , Imunoglobulina E/metabolismo , Dados de Sequência Molecular , Olea/química , Fases de Leitura Aberta , Pichia/genética , Pichia/metabolismo , Proteínas de Plantas/genética , Proteínas de Plantas/imunologia , Pólen/enzimologia , Pólen/imunologia , Ligação Proteica , Sinais Direcionadores de Proteínas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/imunologia , Hipersensibilidade Respiratória/sangue , Hipersensibilidade Respiratória/imunologia , Hipersensibilidade Respiratória/fisiopatologia , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , beta-Glucosidase/química , beta-Glucosidase/genética , beta-Glucosidase/imunologia
17.
Microbiology (Reading) ; 161(10): 1978-1989, 2015 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-26199012

RESUMO

Using a combined chromatography method, we simultaneously purified three protein fractions (II-2, II-3 and II-4) with 1,3-ß-glucanase activity from extraction of pilei of Coprinopsis cinerea fruiting bodies. MALDI-TOF/TOF amino acid sequencing showed that these three fractions matched a putative exo-1,3-ß-glucanase, a putative glucan 1,3-ß-glucosidase and a putative glycosyl hydrolase family 16 protein annotated in the C. cinerea genome, respectively; however, they were characterized as a 1,3-ß-glucosidase, an exo-1,3-ß-glucanase and an endo-1,3-ß-glucanase, respectively, by analysis of their substrate specificities and modes of action. This study explored how these three 1,3-ß-glucoside hydrolases synergistically acted on laminarin: the endo-1,3-ß-glucanase hydrolysed internal glycosidic bonds of laminarin to generate 1,3-ß-oligosaccharides of various lengths, the exo-1,3-ß-glucanase cleaved the longer-chain laminarioligosaccharides into short-chain disaccharides, laminaribiose and gentiobiose, and the 1,3-ß-glucosidase further hydrolysed laminaribiose to glucose. The remaining gentiobiose must be hydrolysed by other 1,6-ß-glucosidases. Therefore, the endo-1,3-ß-glucanase, exo-1,3-ß-glucanase and 1,3-ß-glucosidase may act synergistically to completely degrade the 1,3-ß-glucan backbone of the C. cinerea cell wall during fruiting body autolysis. These three 1,3-ß-glucoside hydrolases share a similar optimum pH and optimum temperature, supporting the speculation that these enzymes work together under the same conditions to degrade 1,3-ß-glucan in the C. cinerea cell wall during fruiting body autolysis.


Assuntos
Agaricales/enzimologia , Glucana 1,3-beta-Glucosidase/isolamento & purificação , Glucana 1,3-beta-Glucosidase/metabolismo , Glucanos/metabolismo , Cromatografia , Estabilidade Enzimática , Carpóforos/enzimologia , Glucana 1,3-beta-Glucosidase/química , Concentração de Íons de Hidrogênio , Hidrólise , Peso Molecular , Análise de Sequência de Proteína , Espectrometria de Massas por Ionização e Dessorção a Laser Assistida por Matriz , Especificidade por Substrato , Temperatura
18.
Acta Crystallogr F Struct Biol Commun ; 71(Pt 6): 680-3, 2015 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-26057795

RESUMO

A ß-1,3-glucanase from the thermophilic fungus Chaetomium thermophilum was overexpressed in Pichia pastoris, purified and crystallized in the presence of 1.8 M sodium/potassium phosphate pH 6.8 as a precipitant. Data to 2.0 Å resolution were collected in-house at 293 K from a single crystal. The crystal was found to belong to space group P2(1), with unit-cell parameters a = 64.1, b = 85.8, c = 68.5 Å, ß = 93.1° and one molecule in the asymmetric unit.


Assuntos
Chaetomium/química , Proteínas Fúngicas/química , Glucana 1,3-beta-Glucosidase/química , Sequência de Aminoácidos , Chaetomium/genética , Clonagem Molecular , Cristalização , Cristalografia por Raios X , Proteínas Fúngicas/genética , Expressão Gênica , Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/isolamento & purificação , Temperatura Alta , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Família Multigênica , Fosfatos/química , Pichia/genética , Pichia/metabolismo , Compostos de Potássio/química , Proteínas Recombinantes/química , Proteínas Recombinantes/genética
19.
Food Chem ; 175: 431-8, 2015 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-25577102

RESUMO

A novel ß-glucosidase gene, designated RmBglu3B, was cloned from the thermophilic fungus, Rhizomucor miehei CAU432. Its 2196-bp open reading frame encoded 731 amino acids. Its deduced amino-acid sequence showed highest identity (66%) with a glycoside hydrolase family 3 ß-glucosidase from R. miehei NRRL5382. RmBglu3B was successfully expressed in Escherichia coli. The recombinant enzyme was purified to homogeneity with 18.2-fold purification and 59% recovery yield. Molecular masses of 76.5 kDa, by SDS-PAGE, and 66.4 kDa, by gel filtration, suggested that it is a monomer. Optimal pH and temperature of the purified enzyme were 5.0 and 50°C, respectively. RmBglu3B exhibited a broad range of substrate specificity, catalyzing the cleavage of ß-1,2, ß-1,3, ß-1,4 and ß-1,6 linkages, in various oligosaccharides, to liberate glucose. RmBglu3B also showed relatively high activity (19.1 U/mg) toward laminaran and transglycosylation activity, enabling gentiobiose production. This enzyme is a potential candidate for several industrial applications.


Assuntos
Glucana 1,3-beta-Glucosidase/biossíntese , Glucana 1,3-beta-Glucosidase/química , Rhizomucor/enzimologia , beta-Glucosidase/biossíntese , beta-Glucosidase/química , Sequência de Aminoácidos , Dados de Sequência Molecular , Especificidade por Substrato
20.
Yeast ; 31(9): 349-59, 2014 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-25044257

RESUMO

A multifunctional exo-ß-1,3-glucanase (WaExg2) was purified from the culture supernatant of the yeast Wickerhamomyces anomalus AS1. The enzyme was identified by mass spectroscopic analysis of tryptic peptide fragments and the encoding gene WaEXG2 was sequenced. The latter codes for a protein of 427 amino acids, beginning with a probable signal peptide (17 aa) for secretion. The mature protein has a molecular mass of 47 456 Da with a calculated pI of 4.84. The somewhat higher mass of the protein in SDS-PAGE might be due to bound carbohydrates. Presumptive disulphide bridges confer a high compactness to the molecule. This explains the apparent smaller molecular mass (35 kDa) of the native enzyme determined by electrophoresis, whereas the unfolded form is consistent with the theoretical mass. Enzymatic hydrolysis of selected glycosides and glycans by WaExg2 was proved by TLC analysis of cleavage products. Glucose was detected as the sole hydrolysis product from laminarin, underlining that the enzyme acts as an exoglucanase. In addition, the enzyme efficiently hydrolysed small ß-linked glycosides (arbutin, esculin, polydatin, salicin) and disaccharides (cellobiose, gentiobiose). WaExg2 was active under typical wine-related conditions, such as low pH (3.5-4.0), high sugar concentrations (up to 20% w/v), high ethanol concentrations (10-15% v/v), presence of sulphites (up to 2 mm) and various cations. Therefore, the characterized enzyme might have multiple uses in winemaking, to increase concentrations of sensory and bioactive compounds by splitting glycosylated precursors or to reduce viscosity by hydrolysis of glycan slimes.


Assuntos
Glucana 1,3-beta-Glucosidase/metabolismo , Saccharomycetales/enzimologia , Saccharomycetales/metabolismo , Vinho/microbiologia , DNA Fúngico/química , DNA Fúngico/genética , Dissulfetos , Eletroforese em Gel de Poliacrilamida , Estabilidade Enzimática , Glucana 1,3-beta-Glucosidase/química , Glucana 1,3-beta-Glucosidase/genética , Glucana 1,3-beta-Glucosidase/isolamento & purificação , Concentração de Íons de Hidrogênio , Ponto Isoelétrico , Espectrometria de Massas , Dados de Sequência Molecular , Peso Molecular , Conformação Proteica , Saccharomycetales/genética , Análise de Sequência de DNA , Especificidade por Substrato
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