Detalhe da pesquisa
1.
HYPK: A marginally disordered protein sensitive to charge decoration.
Proc Natl Acad Sci U S A
; 121(18): e2316408121, 2024 Apr 30.
Artigo
Inglês
| MEDLINE | ID: mdl-38657047
2.
MaxCal can infer models from coupled stochastic trajectories of gene expression and cell division.
Biophys J
; 122(13): 2623-2635, 2023 07 11.
Artigo
Inglês
| MEDLINE | ID: mdl-37218129
3.
Intrachain interaction topology can identify functionally similar intrinsically disordered proteins.
Biophys J
; 120(10): 1860-1868, 2021 05 18.
Artigo
Inglês
| MEDLINE | ID: mdl-33865811
4.
The Maximum Caliber Variational Principle for Nonequilibria.
Annu Rev Phys Chem
; 71: 213-238, 2020 04 20.
Artigo
Inglês
| MEDLINE | ID: mdl-32075515
5.
Critical Comparison of MaxCal and Other Stochastic Modeling Approaches in Analysis of Gene Networks.
Entropy (Basel)
; 23(3)2021 Mar 17.
Artigo
Inglês
| MEDLINE | ID: mdl-33802879
6.
The Anti-Aggregation Holdase Hsp33 Promotes the Formation of Folded Protein Structures.
Biophys J
; 118(1): 85-95, 2020 01 07.
Artigo
Inglês
| MEDLINE | ID: mdl-31757359
7.
An analytical theory to describe sequence-specific inter-residue distance profiles for polyampholytes and intrinsically disordered proteins.
J Chem Phys
; 152(16): 161102, 2020 Apr 30.
Artigo
Inglês
| MEDLINE | ID: mdl-32357776
8.
A unified analytical theory of heteropolymers for sequence-specific phase behaviors of polyelectrolytes and polyampholytes.
J Chem Phys
; 152(4): 045102, 2020 Jan 31.
Artigo
Inglês
| MEDLINE | ID: mdl-32007034
9.
Sequence charge decoration dictates coil-globule transition in intrinsically disordered proteins.
J Chem Phys
; 148(12): 123305, 2018 Mar 28.
Artigo
Inglês
| MEDLINE | ID: mdl-29604827
10.
Modulating charge patterning and ionic strength as a strategy to induce conformational changes in intrinsically disordered proteins.
J Chem Phys
; 149(8): 085101, 2018 Aug 28.
Artigo
Inglês
| MEDLINE | ID: mdl-30193467
11.
Perspective: Maximum caliber is a general variational principle for dynamical systems.
J Chem Phys
; 148(1): 010901, 2018 Jan 07.
Artigo
Inglês
| MEDLINE | ID: mdl-29306272
12.
Stoichiometric versus stochastic interaction in models of liquid-liquid phase separation.
Biophys J
; 121(1): 4-6, 2022 01 04.
Artigo
Inglês
| MEDLINE | ID: mdl-34932937
13.
Building Predictive Models of Genetic Circuits Using the Principle of Maximum Caliber.
Biophys J
; 113(9): 2121-2130, 2017 Nov 07.
Artigo
Inglês
| MEDLINE | ID: mdl-29117534
14.
(Almost) Everything in Cotranslational Folding Makes Sense in the Light of Evolution.
Biophys J
; 119(6): 1045-1047, 2020 09 15.
Artigo
Inglês
| MEDLINE | ID: mdl-32853561
15.
A theoretical method to compute sequence dependent configurational properties in charged polymers and proteins.
J Chem Phys
; 143(8): 085101, 2015 Aug 28.
Artigo
Inglês
| MEDLINE | ID: mdl-26328871
16.
Inherent properties of adenylosuccinate lyase could explain S-Ado/SAICAr ratio due to homozygous R426H and R303C mutations.
Biochim Biophys Acta
; 1834(8): 1545-53, 2013 Aug.
Artigo
Inglês
| MEDLINE | ID: mdl-23714113
17.
Correction to "Maximum Caliber Can Build and Infer Models of Oscillation in a Three-Gene Feedback Network".
J Phys Chem A
; 2019 Feb 08.
Artigo
Inglês
| MEDLINE | ID: mdl-30735048
18.
Physical limits of cells and proteomes.
Proc Natl Acad Sci U S A
; 108(44): 17876-82, 2011 Nov 01.
Artigo
Inglês
| MEDLINE | ID: mdl-22006304
19.
Nonadditive entropies yield probability distributions with biases not warranted by the data.
Phys Rev Lett
; 111(18): 180604, 2013 Nov 01.
Artigo
Inglês
| MEDLINE | ID: mdl-24237501
20.
Competition enhances stochasticity in biochemical reactions.
J Chem Phys
; 139(12): 121915, 2013 Sep 28.
Artigo
Inglês
| MEDLINE | ID: mdl-24089727